RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 CHURC1Q8WUH1 139 aa9.74□□□□□ -0.85
LSAMP-201ENST00000333617 RAD54LQ92698 747 aa9.74□□□□□ -0.85
LSAMP-201ENST00000333617 DHTKD1Q96HY7 919 aaPredicted RBP9.74□□□□□ -0.85
LSAMP-201ENST00000333617 MBOAT7Q96N66 472 aa9.74□□□□□ -0.85
LSAMP-201ENST00000333617 LRRC27Q9C0I9 530 aa9.74□□□□□ -0.85
LSAMP-201ENST00000333617 PPP1R1BQ9UD71 204 aaPredicted RBP9.74□□□□□ -0.85
LSAMP-201ENST00000333617 ADD3Q9UEY8 706 aaKnown RBP9.74□□□□□ -0.85
LSAMP-201ENST00000333617 PCDHA12Q9UN75 941 aa9.74□□□□□ -0.85
LSAMP-201ENST00000333617 KDM3AQ9Y4C1 1321 aa9.74□□□□□ -0.85
LSAMP-201ENST00000333617 USP27XA6NNY8 438 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 KCNJ18B7U540 433 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 SLC26A4O43511 780 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 ASNSP08243 561 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 RPS12P25398 132 aaKnown RBP9.73□□□□□ -0.85
LSAMP-201ENST00000333617 MAP3K10Q02779 954 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 KCNJ12Q14500 433 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 MCM6Q14566 821 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 KRT31Q15323 416 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 PTPN14Q15678 1187 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 TMEM119Q4V9L6 283 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 TCP11X2Q5H9J9 407 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 KIAA1755Q5JYT7 1200 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 CNNM4Q6P4Q7 775 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 LYPD8Q6UX82 237 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 TEX2Q8IWB9 1127 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 SLFN12Q8IYM2 578 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 CRYGNQ8WXF5 182 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 TMX1Q9H3N1 280 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 VCPKMTQ9H867 229 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 BLOC1S4Q9NUP1 217 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 TRMT1Q9NXH9 659 aaKnown RBP9.73□□□□□ -0.85
LSAMP-201ENST00000333617 PGAP2Q9UHJ9 254 aa9.73□□□□□ -0.85
LSAMP-201ENST00000333617 SHTN1A0MZ66 631 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 BICDL2A1A5D9 508 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 MYMKA6NI61 221 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 LRRC10BA6NIK2 292 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 CFAP99D6REC4 459 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 PIK3CDO00329 1044 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 TEX33O43247 280 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 CCP110O43303 1012 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 PLA2G6O60733 806 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 SREBF1P36956 1147 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 CCT6AP40227 531 aaKnown RBP9.72□□□□□ -0.85
LSAMP-201ENST00000333617 COPB1P53618 953 aaKnown RBP9.72□□□□□ -0.85
LSAMP-201ENST00000333617 ZNF280AP59817 542 aaPredicted RBP9.72□□□□□ -0.85
LSAMP-201ENST00000333617 SH3BP2P78314 561 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 GOLGA8FQ08AF8 430 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 GOLGA8DPQ0D2H9 430 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 TNFAIP1Q13829 316 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 ZYXQ15942 572 aaKnown RBP9.72□□□□□ -0.85
LSAMP-201ENST00000333617 Q4G0T1 1027 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 CEP135Q66GS9 1140 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 E4F1Q66K89 784 aaPredicted RBP9.72□□□□□ -0.85
LSAMP-201ENST00000333617 UNC13DQ70J99 1090 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 FAM160B2Q86V87 743 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 PPFIBP1Q86W92 1011 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 MYRIPQ8NFW9 859 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 NOC3LQ8WTT2 800 aaKnown RBP9.72□□□□□ -0.85
LSAMP-201ENST00000333617 GJA10Q969M2 543 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 TRIM47Q96LD4 638 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 NT5C3AQ9H0P0 336 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 KCNMB3Q9NPA1 279 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 FEM1BQ9UK73 627 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 BCS1LQ9Y276 419 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 LTBP3Q9NS15 1303 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 RLFQ13129 1914 aa9.72□□□□□ -0.85
LSAMP-201ENST00000333617 PVALEFA0A1B0GWK0 134 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 TRIM49BA6NDI0 452 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 AKR1B15C9JRZ8 316 aaPredicted RBP9.71□□□□□ -0.85
LSAMP-201ENST00000333617 KIF2AO00139 706 aaPredicted RBP9.71□□□□□ -0.85
LSAMP-201ENST00000333617 OPLAHO14841 1288 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 N4BP3O15049 544 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 TBX3O15119 743 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 ALDH1A1P00352 501 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 CCNE1P24864 410 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 EEF1GP26641 437 aaKnown RBP9.71□□□□□ -0.85
LSAMP-201ENST00000333617 HOXA7P31268 230 aaPredicted RBP9.71□□□□□ -0.85
LSAMP-201ENST00000333617 HOXA13P31271 388 aaPredicted RBP9.71□□□□□ -0.85
LSAMP-201ENST00000333617 PBX1P40424 430 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 STK4Q13043 487 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 RASA3Q14644 834 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 ECM1Q16610 540 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 TUSC1Q2TAM9 212 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 COBLL1Q53SF7 1204 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 PRR16Q569H4 304 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 HYIQ5T013 277 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 CCDC174Q6PII3 467 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 CREBRFQ8IUR6 639 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 TC2NQ8N9U0 490 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 P2RX5Q93086 422 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 KIFC2Q96AC6 838 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 PPP1R13BQ96KQ4 1090 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 P2RX7Q99572 595 aaKnown RBP9.71□□□□□ -0.85
LSAMP-201ENST00000333617 FEZ1Q99689 392 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 BAG1Q99933 345 aaPredicted RBP9.71□□□□□ -0.85
LSAMP-201ENST00000333617 VPS16Q9H269 839 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 RANBP17Q9H2T7 1088 aaKnown RBP9.71□□□□□ -0.85
LSAMP-201ENST00000333617 THAP9Q9H5L6 903 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 TAB2Q9NYJ8 693 aa9.71□□□□□ -0.85
LSAMP-201ENST00000333617 MAGEC2Q9UBF1 373 aaPredicted RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms