RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 PAFAH1B1P43034 410 aa13.58□□□□□ -0.24
VPS33B-201ENST00000333371 GUCY2FP51841 1108 aa13.58□□□□□ -0.24
VPS33B-201ENST00000333371 SFMBT2Q5VUG0 894 aa13.58□□□□□ -0.24
VPS33B-201ENST00000333371 FAM163AQ96GL9 167 aaPredicted RBP13.58□□□□□ -0.24
VPS33B-201ENST00000333371 TSPYL1Q9H0U9 437 aa13.58□□□□□ -0.24
VPS33B-201ENST00000333371 DAGLAQ9Y4D2 1042 aa13.58□□□□□ -0.24
VPS33B-201ENST00000333371 GAKO14976 1311 aa13.58□□□□□ -0.24
VPS33B-201ENST00000333371 MMP10P09238 476 aa13.58□□□□□ -0.24
VPS33B-201ENST00000333371 PRLRP16471 622 aa13.58□□□□□ -0.24
VPS33B-201ENST00000333371 FKBP3Q00688 224 aaKnown RBP13.58□□□□□ -0.24
VPS33B-201ENST00000333371 GUCY2DQ02846 1103 aa13.58□□□□□ -0.24
VPS33B-201ENST00000333371 SLC20A2Q08357 652 aa13.58□□□□□ -0.24
VPS33B-201ENST00000333371 ZIM3Q96PE6 472 aa13.58□□□□□ -0.24
VPS33B-201ENST00000333371 PCDHA12Q9UN75 941 aa13.58□□□□□ -0.24
VPS33B-201ENST00000333371 FGFR1OPO95684 399 aaKnown RBP13.57□□□□□ -0.24
VPS33B-201ENST00000333371 TAL1P17542 331 aaPredicted RBP13.57□□□□□ -0.24
VPS33B-201ENST00000333371 ATP1A2P50993 1020 aa13.57□□□□□ -0.24
VPS33B-201ENST00000333371 CASP5P51878 434 aa13.57□□□□□ -0.24
VPS33B-201ENST00000333371 PDIA5Q14554 519 aa13.57□□□□□ -0.24
VPS33B-201ENST00000333371 DOK7Q18PE1 504 aa13.57□□□□□ -0.24
VPS33B-201ENST00000333371 SLC9C1Q4G0N8 1177 aa13.57□□□□□ -0.24
VPS33B-201ENST00000333371 PACS2Q86VP3 889 aa13.57□□□□□ -0.24
VPS33B-201ENST00000333371 FLAD1Q8NFF5 587 aa13.57□□□□□ -0.24
VPS33B-201ENST00000333371 RAB34Q9BZG1 259 aa13.57□□□□□ -0.24
VPS33B-201ENST00000333371 EPB41L5Q9HCM4 733 aa13.57□□□□□ -0.24
VPS33B-201ENST00000333371 LTBP1Q14766 1721 aa13.57□□□□□ -0.24
VPS33B-201ENST00000333371 GRIN2DO15399 1336 aa13.57□□□□□ -0.24
VPS33B-201ENST00000333371 PLSCR1O15162 318 aa13.57□□□□□ -0.24
VPS33B-201ENST00000333371 SHOX2O60902 331 aaPredicted RBP13.57□□□□□ -0.24
VPS33B-201ENST00000333371 EPHB4P54760 987 aa13.57□□□□□ -0.24
VPS33B-201ENST00000333371 GNGT1P63211 74 aa13.57□□□□□ -0.24
VPS33B-201ENST00000333371 HERC4Q5GLZ8 1057 aaPredicted RBP13.57□□□□□ -0.24
VPS33B-201ENST00000333371 MSL1Q68DK7 614 aa13.57□□□□□ -0.24
VPS33B-201ENST00000333371 ZNF772Q68DY9 489 aaPredicted RBP13.57□□□□□ -0.24
VPS33B-201ENST00000333371 AKT1S1Q96B36 256 aa13.57□□□□□ -0.24
VPS33B-201ENST00000333371 KRT12Q99456 494 aa13.57□□□□□ -0.24
VPS33B-201ENST00000333371 CEP72Q9P209 647 aa13.57□□□□□ -0.24
VPS33B-201ENST00000333371 SMCHD1A6NHR9 2005 aa13.57□□□□□ -0.24
VPS33B-201ENST00000333371 FAM196BA6NMK8 535 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 MPHOSPH10O00566 681 aaKnown RBP13.56□□□□□ -0.24
VPS33B-201ENST00000333371 HEXIM1O94992 359 aaKnown RBP13.56□□□□□ -0.24
VPS33B-201ENST00000333371 NOVP48745 357 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 SNAP25P60880 206 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 KIAA0753Q2KHM9 967 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 GPBP1Q86WP2 473 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 SCFD1Q8WVM8 642 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 ZNF622Q969S3 477 aaKnown RBP eCLIP13.56□□□□□ -0.247e-6■■■■□ 22.7
VPS33B-201ENST00000333371 CAPS2Q9BXY5 557 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 RIC8AQ9NPQ8 531 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 SAMM50Q9Y512 469 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.56□□□□□ -0.24
VPS33B-201ENST00000333371 ADAMTSL1Q8N6G6 1762 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 SRCAPQ6ZRS2 3230 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 SSU72P8A0A1W2PR75 194 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 POTEFA5A3E0 1075 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 MEIS1O00470 390 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 POTEIP0CG38 1075 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 SMARCA1P28370 1054 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 CORO7P57737 925 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 ITIH3Q06033 890 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 ZNF543Q08ER8 600 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 PDCLQ13371 301 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 POTEGQ6S5H5 508 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 POTEEQ6S8J3 1075 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 IQCDQ96DY2 449 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 CCDC43Q96MW1 224 aaKnown RBP13.56□□□□□ -0.24
VPS33B-201ENST00000333371 SH3GL2Q99962 352 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 PCDHA2Q9Y5H9 948 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 ABCB11O95342 1321 aa13.56□□□□□ -0.24
VPS33B-201ENST00000333371 PNMA6FA0A0J9YX94 578 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 SERPING1P05155 500 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 PLA2G4BP0C869 781 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 SCNN1DP51172 638 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 CFAP221Q4G0U5 840 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 ASPRV1Q53RT3 343 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 KLHL7Q8IXQ5 586 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 BCAS4Q8TDM0 211 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 MASTLQ96GX5 879 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 SUGT1Q9Y2Z0 365 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 FOCADQ5VW36 1801 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 MED24O75448 989 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 SNHG28P0DPA3 235 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 SLC9A1P19634 815 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 CLK2P49760 499 aaKnown RBP13.55□□□□□ -0.24
VPS33B-201ENST00000333371 PSMC6P62333 389 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 GABPAQ06546 454 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 PSMD2Q13200 908 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 ADAM9Q13443 819 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 TRIM59Q8IWR1 403 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 PSTPIP2Q9H939 334 aa13.55□□□□□ -0.24
VPS33B-201ENST00000333371 RBAK-RBAKDNI3L0D1 243 aa13.54□□□□□ -0.24
VPS33B-201ENST00000333371 HSF2BPO75031 334 aa13.54□□□□□ -0.24
VPS33B-201ENST00000333371 KLHL30Q0D2K2 578 aa13.54□□□□□ -0.24
VPS33B-201ENST00000333371 PPFIA1Q13136 1202 aa13.54□□□□□ -0.24
VPS33B-201ENST00000333371 ORC2Q13416 577 aaPredicted RBP13.54□□□□□ -0.24
VPS33B-201ENST00000333371 NAB2Q15742 525 aa13.54□□□□□ -0.24
VPS33B-201ENST00000333371 ARSHQ5FYA8 562 aa13.54□□□□□ -0.24
VPS33B-201ENST00000333371 PPP4R3AQ6IN85 833 aa13.54□□□□□ -0.24
VPS33B-201ENST00000333371 CASKIN2Q8WXE0 1202 aa13.54□□□□□ -0.24
VPS33B-201ENST00000333371 CUL5Q93034 780 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms