RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 CALUO43852 315 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 LCA5LO95447 670 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 ARHGAP4P98171 946 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 ICA1Q05084 483 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 KCNH2Q12809 1159 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 AP3B2Q13367 1082 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 DHX36Q9H2U1 1008 aaKnown RBP12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 DMGDHQ9UI17 866 aaKnown RBP12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 PJA2O43164 708 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 PALMO75781 387 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 FTCDO95954 541 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 CYP11B2P19099 503 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 ALDH1B1P30837 517 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 CACNB3P54284 484 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 RNASE9P60153 205 aaKnown RBP12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 EHHADHQ08426 723 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 KCNMA1Q12791 1236 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 PPFIA1Q13136 1202 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 EMBQ6PCB8 327 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 DCAF4Q8WV16 495 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 MTMR8Q96EF0 704 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 SMARCAL1Q9NZC9 954 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 PI4KBQ9UBF8 816 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 STK24Q9Y6E0 443 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 MYBL2P10244 700 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 CLK2P49760 499 aaKnown RBP12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 NFIAQ12857 509 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 SLC18A3Q16572 532 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 HHIPL2Q6UWX4 724 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 FBXO11Q86XK2 927 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 TRIM59Q8IWR1 403 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 CERS5Q8N5B7 392 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 SCFD1Q8WVM8 642 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 HDAC9Q9UKV0 1011 aa12.86□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 EPB41P11171 864 aaKnown RBP12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 CRKP46108 304 aa12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 EZH2Q15910 746 aaKnown RBP12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 EXOC3L4Q17RC7 722 aa12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 ZNF622Q969S3 477 aaKnown RBP eCLIP12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 ZNF831Q5JPB2 1677 aa12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 FOSP01100 380 aaPredicted RBP12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 CYP4A11Q02928 519 aa12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 EDRF1Q3B7T1 1238 aa12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 ZCWPW2Q504Y3 356 aa12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 GLE1Q53GS7 698 aaKnown RBP12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 C10orf67Q8IYJ2 551 aa12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 SEPT12Q8IYM1 358 aa12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 HDAC7Q8WUI4 952 aa12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 EHD2Q9NZN4 543 aa12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 PITPNM2Q9BZ72 1349 aa12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 GCNT3O95395 438 aa12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 SYF2O95926 243 aaKnown RBP12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 AFPP02771 609 aaKnown RBP12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 TNNC1P63316 161 aa12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 DDR1Q08345 913 aa12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 TLR10Q9BXR5 811 aa12.85□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 TNRC6CQ9HCJ0 1690 aaKnown RBP12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 TMCO5BA8MYB1 307 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 TULP1O00294 542 aaPredicted RBP12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 SLC26A4O43511 780 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 PAK2Q13177 524 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 RPS6KA1Q15418 735 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 HYIQ5T013 277 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 MS4A14Q96JA4 679 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 DBNDD1Q9H9R9 158 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 RBM12Q9NTZ6 932 aaKnown RBP12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 BZW2Q9Y6E2 419 aaKnown RBP12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 COL24A1Q17RW2 1714 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 GOLGA8KD6RF30 607 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 MED24O75448 989 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 FLOT1O75955 427 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 KNOP1Q1ED39 458 aaKnown RBP12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 KLHDC7AQ5VTJ3 777 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 SAMD1Q6SPF0 538 aaPredicted RBP12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 HEXIM1O94992 359 aaKnown RBP12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 NPR1P16066 1061 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 HMGB2P26583 209 aaKnown RBP12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 SNAP25P60880 206 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 GUCY2DQ02846 1103 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 HLTFQ14527 1009 aaKnown RBP eCLIP12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 NAB2Q15742 525 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 SLC27A3Q5K4L6 730 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 CFAP58Q5T655 872 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 HGSNATQ68CP4 663 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 SFR1Q86XK3 245 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 FGFBP2Q9BYJ0 223 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 PLEKHA4Q9H4M7 779 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 METTL14Q9HCE5 456 aaKnown RBP12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 NYAP2Q9P242 653 aa12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 RRP15Q9Y3B9 282 aaKnown RBP12.84□□□□□ -0.35
CSPG4P4Y-201ENST00000333235 F5H6K3 240 aa12.83□□□□□ -0.36
CSPG4P4Y-201ENST00000333235 POLRMTO00411 1230 aaKnown RBP12.83□□□□□ -0.36
CSPG4P4Y-201ENST00000333235 EDIL3O43854 480 aa12.83□□□□□ -0.36
CSPG4P4Y-201ENST00000333235 KLRC1P26715 233 aa12.83□□□□□ -0.36
CSPG4P4Y-201ENST00000333235 KLRC3Q07444 240 aa12.83□□□□□ -0.36
CSPG4P4Y-201ENST00000333235 DNAJC21Q5F1R6 531 aaKnown RBP12.83□□□□□ -0.36
CSPG4P4Y-201ENST00000333235 APOBEC3HQ6NTF7 200 aaKnown RBP12.83□□□□□ -0.36
CSPG4P4Y-201ENST00000333235 CATSPER3Q86XQ3 398 aa12.83□□□□□ -0.36
CSPG4P4Y-201ENST00000333235 AENQ8WTP8 325 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms