RNA–Protein interactions for RNA: ENST00000331471.8

BEST3-203, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,506 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-203ENST00000331471 PTH1RQ03431 593 aa10.19□□□□□ -0.78
BEST3-203ENST00000331471 RBL2Q08999 1139 aa10.19□□□□□ -0.78
BEST3-203ENST00000331471 HSDL1Q3SXM5 330 aa10.19□□□□□ -0.78
BEST3-203ENST00000331471 MYSM1Q5VVJ2 828 aa10.19□□□□□ -0.78
BEST3-203ENST00000331471 TMCO2Q7Z6W1 182 aaPredicted RBP10.19□□□□□ -0.78
BEST3-203ENST00000331471 METTL3Q86U44 580 aaKnown RBP10.19□□□□□ -0.78
BEST3-203ENST00000331471 IL31RAQ8NI17 732 aa10.19□□□□□ -0.78
BEST3-203ENST00000331471 PIBF1Q8WXW3 757 aa10.19□□□□□ -0.78
BEST3-203ENST00000331471 RIOX1Q9H6W3 641 aa10.19□□□□□ -0.78
BEST3-203ENST00000331471 ADGRG1Q9Y653 693 aa10.19□□□□□ -0.78
BEST3-203ENST00000331471 ABHD14A-ACY1A0A1B0GW23 586 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 C17orf102A2RUQ5 167 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 E7EWF7 191 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 NOP56O00567 594 aaKnown RBP10.18□□□□□ -0.78
BEST3-203ENST00000331471 EFCAB14O75071 495 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 RGS20O76081 388 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 ARHGEF15O94989 841 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 TGFB3P10600 412 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 HOXB1P14653 301 aaPredicted RBP10.18□□□□□ -0.78
BEST3-203ENST00000331471 POU3F3P20264 500 aaPredicted RBP10.18□□□□□ -0.78
BEST3-203ENST00000331471 CHMLP26374 656 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 THPOP40225 353 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 PRSS12P56730 875 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 ZNF200P98182 395 aaPredicted RBP10.18□□□□□ -0.78
BEST3-203ENST00000331471 SP2Q02086 613 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 TFF2Q03403 129 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 IKBKEQ14164 716 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 GPNMBQ14956 572 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 RABEP1Q15276 862 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 GNPTABQ3T906 1256 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 ZNF618Q5T7W0 954 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 KRT40Q6A162 431 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 CASC1Q6TDU7 716 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 TMUB1Q9BVT8 246 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 SENP2Q9HC62 589 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 CHD7Q9P2D1 2997 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 COL4A4P53420 1690 aaPredicted RBP10.18□□□□□ -0.78
BEST3-203ENST00000331471 MYH7BA7E2Y1 1941 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 PTPRSQ13332 1948 aa10.18□□□□□ -0.78
BEST3-203ENST00000331471 LCHNA4D1U4 455 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 K7ELQ4 463 aaPredicted RBP10.17□□□□□ -0.78
BEST3-203ENST00000331471 CYTH3O43739 400 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 LGR5O75473 907 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 HOXD8P13378 290 aaPredicted RBP10.17□□□□□ -0.78
BEST3-203ENST00000331471 TROAPQ12815 778 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 GRB10Q13322 594 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 SLC35G1Q2M3R5 365 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 TRIM71Q2Q1W2 868 aaKnown RBP10.17□□□□□ -0.78
BEST3-203ENST00000331471 FAM117BQ6P1L5 589 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 CLEC17AQ6ZS10 378 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 TTC13Q8NBP0 860 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 CTCFLQ8NI51 663 aaPredicted RBP10.17□□□□□ -0.78
BEST3-203ENST00000331471 GPKOWQ92917 476 aaPredicted RBP eCLIP10.17□□□□□ -0.78
BEST3-203ENST00000331471 CUL5Q93034 780 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 ATP6V0A1Q93050 837 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 WNT8BQ93098 351 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 MTUS1Q9ULD2 1270 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 TRIP12Q14669 1992 aaPredicted RBP10.17□□□□□ -0.78
BEST3-203ENST00000331471 XIRP2A4UGR9 3374 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 EMSYQ7Z589 1322 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 RSPH10B2B2RC85 870 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 H3BRB1 525 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 SNPHO15079 494 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 STAM2O75886 525 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 GJB5O95377 273 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 AMHP03971 560 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 RSPH10BP0C881 870 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 SMIM10L2AP0DMW4 78 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 SMIM10L2BP0DMW5 78 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 KCNQ1P51787 676 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 NEDD9Q14511 834 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 TCTN1Q2MV58 587 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 SPRED2Q7Z698 418 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 SMARCC2Q8TAQ2 1214 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 GDPD5Q8WTR4 605 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 RRP36Q96EU6 259 aaKnown RBP10.17□□□□□ -0.78
BEST3-203ENST00000331471 NECAB3Q96P71 396 aaPredicted RBP10.17□□□□□ -0.78
BEST3-203ENST00000331471 RAD9AQ99638 391 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 C16orf70Q9BSU1 422 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 TUT1Q9H6E5 874 aaKnown RBP10.17□□□□□ -0.78
BEST3-203ENST00000331471 RTEL1Q9NZ71 1219 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 SEC63Q9UGP8 760 aaKnown RBP10.17□□□□□ -0.78
BEST3-203ENST00000331471 COG5Q9UP83 839 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 TAF6LQ9Y6J9 622 aa10.17□□□□□ -0.78
BEST3-203ENST00000331471 REV3LO60673 3130 aa10.16□□□□□ -0.78
BEST3-203ENST00000331471 SGSM2O43147 1006 aa10.16□□□□□ -0.78
BEST3-203ENST00000331471 FIBPO43427 364 aa10.16□□□□□ -0.78
BEST3-203ENST00000331471 EPB41L2O43491 1005 aaKnown RBP10.16□□□□□ -0.78
BEST3-203ENST00000331471 REC8O95072 547 aa10.16□□□□□ -0.78
BEST3-203ENST00000331471 OATP04181 439 aa10.16□□□□□ -0.78
BEST3-203ENST00000331471 LGALS2P05162 132 aa10.16□□□□□ -0.78
BEST3-203ENST00000331471 GNAT1P11488 350 aa10.16□□□□□ -0.78
BEST3-203ENST00000331471 KIF5BP33176 963 aa10.16□□□□□ -0.78
BEST3-203ENST00000331471 UTP14CQ5TAP6 766 aaKnown RBP10.16□□□□□ -0.78
BEST3-203ENST00000331471 TRAF7Q6Q0C0 670 aa10.16□□□□□ -0.78
BEST3-203ENST00000331471 METTL7BQ6UX53 244 aa10.16□□□□□ -0.78
BEST3-203ENST00000331471 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.16□□□□□ -0.78
BEST3-203ENST00000331471 NFXL1Q6ZNB6 911 aa10.16□□□□□ -0.78
BEST3-203ENST00000331471 CYFIP1Q7L576 1253 aa10.16□□□□□ -0.78
BEST3-203ENST00000331471 SERINC5Q86VE9 423 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms