RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 ERICH1Q86X53 443 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 TBC1D10CQ8IV04 446 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 CSGALNACT2Q8N6G5 542 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 ABTB2Q8N961 1025 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 MKL1Q969V6 931 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 IFT43Q96FT9 208 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 MTRQ99707 1265 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 NOC4LQ9BVI4 516 aaKnown RBP9.16□□□□□ -0.94
SKA2-201ENST00000330137 FBXL5Q9UKA1 691 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 TTC7AQ9ULT0 858 aaPredicted RBP9.16□□□□□ -0.94
SKA2-201ENST00000330137 TMCO1Q9UM00 188 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 DIS3Q9Y2L1 958 aaKnown RBP9.16□□□□□ -0.94
SKA2-201ENST00000330137 CHD4Q14839 1912 aa9.16□□□□□ -0.94
SKA2-201ENST00000330137 IGF2BP3O00425 579 aaKnown RBP eCLIP9.15□□□□□ -0.94
SKA2-201ENST00000330137 CXCR5P32302 372 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 DRG2P55039 364 aaKnown RBP9.15□□□□□ -0.94
SKA2-201ENST00000330137 NR5A1Q13285 461 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 TNFAIP8L3Q5GJ75 292 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 TTC38Q5R3I4 469 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 WASHC2DQ5SRD0 308 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 RNF43Q68DV7 783 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 ILDR2Q71H61 639 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 C2CD5Q86YS7 1000 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 AGGF1Q8N302 714 aaeCLIP9.15□□□□□ -0.94
SKA2-201ENST00000330137 CNBD1Q8NA66 436 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 UBLCP1Q8WVY7 318 aaPredicted RBP9.15□□□□□ -0.94
SKA2-201ENST00000330137 LPIN2Q92539 896 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 TNFRSF25Q93038 417 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 P2RX5Q93086 422 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 MTMR8Q96EF0 704 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 PLEKHG4BQ96PX9 1271 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 UBAC1Q9BSL1 405 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 PUS7LQ9H0K6 701 aaKnown RBP9.15□□□□□ -0.94
SKA2-201ENST00000330137 VCX3BQ9H321 246 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 ZWILCHQ9H900 591 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 VCX3AQ9NNX9 186 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 LMCD1Q9NZU5 365 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 CIDEBQ9UHD4 219 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 KCNJ14Q9UNX9 436 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 ARL2BPQ9Y2Y0 163 aa9.15□□□□□ -0.94
SKA2-201ENST00000330137 ZBTB12Q9Y330 459 aaPredicted RBP9.15□□□□□ -0.94
SKA2-201ENST00000330137 ESYT3A0FGR9 886 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 ZSCAN9O15535 394 aaPredicted RBP9.15□□□□□ -0.95
SKA2-201ENST00000330137 ATP2C2O75185 946 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 CHN1P15882 459 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 ADD2P35612 726 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 NLRP6P59044 892 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 PLS1Q14651 629 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 ZRSR2Q15696 482 aaKnown RBP9.15□□□□□ -0.95
SKA2-201ENST00000330137 GNPTABQ3T906 1256 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 HHATQ5VTY9 493 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 TYW1BQ6NUM6 668 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 RAB11FIP4Q86YS3 637 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 RASGEF1CQ8N431 466 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 TBC1D16Q8TBP0 767 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 STK32AQ8WU08 396 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 INPP5DQ92835 1189 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 CNOT6LQ96LI5 555 aaKnown RBP9.15□□□□□ -0.95
SKA2-201ENST00000330137 DUSP9Q99956 384 aaKnown RBP9.15□□□□□ -0.95
SKA2-201ENST00000330137 TXLNGQ9NUQ3 528 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 INTS9Q9NV88 658 aaKnown RBP9.15□□□□□ -0.95
SKA2-201ENST00000330137 AIPL1Q9NZN9 384 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 AGAP1Q9UPQ3 857 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 PHF24Q9UPV7 400 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 CCDC9Q9Y3X0 531 aaKnown RBP9.15□□□□□ -0.95
SKA2-201ENST00000330137 C2CD2Q9Y426 696 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 MYH10P35580 1976 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 RTL9Q8NET4 1388 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 C5P01031 1676 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 PKD1L3Q7Z443 1732 aa9.15□□□□□ -0.95
SKA2-201ENST00000330137 MYH6P13533 1939 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 MYH2Q9UKX2 1941 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 UBOX5O94941 541 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 SERPING1P05155 500 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 CSB-PGBD3P0DP91 1061 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 PDE6BP35913 854 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 USP11P51784 963 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 TIMM10P62072 90 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 KCNJ2P63252 427 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 SLC9C1Q4G0N8 1177 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 PPP1R15BQ5SWA1 713 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 ZNF772Q68DY9 489 aaPredicted RBP9.14□□□□□ -0.95
SKA2-201ENST00000330137 LMBR1LQ6UX01 489 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 KRT26Q7Z3Y9 468 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 LRP10Q7Z4F1 713 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 LCA5Q86VQ0 697 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 XAGE3Q8WTP9 111 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 NCSTNQ92542 709 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 KIFAP3Q92845 792 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 MS4A14Q96JA4 679 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 PCMTD1Q96MG8 357 aaPredicted RBP9.14□□□□□ -0.95
SKA2-201ENST00000330137 PDP2Q9P2J9 529 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 A0A087WZG4 1122 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 ZSCAN5CA6NGD5 496 aaPredicted RBP9.14□□□□□ -0.95
SKA2-201ENST00000330137 B4E1Z4 1266 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 PGRMC1O00264 195 aaKnown RBP9.14□□□□□ -0.95
SKA2-201ENST00000330137 KLRC4O43908 158 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 HNRNPCL1O60812 293 aaKnown RBP9.14□□□□□ -0.95
SKA2-201ENST00000330137 CASP1P29466 404 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 GUCY1A2P33402 732 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms