RNA–Protein interactions for RNA: ENST00000325222.8

CUL1-201, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 3,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-201ENST00000325222 LRIG3Q6UXM1 1119 aa15.98■□□□□ 0.15
CUL1-201ENST00000325222 SYN2Q92777 582 aaPredicted RBP15.98■□□□□ 0.15
CUL1-201ENST00000325222 DNAJC19Q96DA6 116 aa15.98■□□□□ 0.15
CUL1-201ENST00000325222 FBXL5Q9UKA1 691 aa15.98■□□□□ 0.15
CUL1-201ENST00000325222 COL4A3BPQ9Y5P4 624 aa15.98■□□□□ 0.15
CUL1-201ENST00000325222 SH3RF3Q8TEJ3 882 aaPredicted RBP15.98■□□□□ 0.15
CUL1-201ENST00000325222 RAPGEF5Q92565 580 aa15.98■□□□□ 0.15
CUL1-201ENST00000325222 DDX47Q9H0S4 455 aaKnown RBP15.98■□□□□ 0.15
CUL1-201ENST00000325222 SRRM3A6NNA2 597 aaPredicted RBP15.98■□□□□ 0.15
CUL1-201ENST00000325222 GCOM1H8Y6P7 765 aaPredicted RBP15.98■□□□□ 0.15
CUL1-201ENST00000325222 TRAF5O00463 557 aa15.98■□□□□ 0.15
CUL1-201ENST00000325222 OPLAHO14841 1288 aa15.98■□□□□ 0.15
CUL1-201ENST00000325222 MYZAPP0CAP1 466 aa15.98■□□□□ 0.15
CUL1-201ENST00000325222 ITPK1Q13572 414 aa15.98■□□□□ 0.15
CUL1-201ENST00000325222 NEDD9Q14511 834 aa15.98■□□□□ 0.15
CUL1-201ENST00000325222 PLCB4Q15147 1175 aa15.98■□□□□ 0.15
CUL1-201ENST00000325222 ANKRD20A8PQ5CZ79 823 aa15.98■□□□□ 0.15
CUL1-201ENST00000325222 ZNF526Q8TF50 670 aaPredicted RBP15.98■□□□□ 0.15
CUL1-201ENST00000325222 MIEF2Q96C03 454 aa15.98■□□□□ 0.15
CUL1-201ENST00000325222 GANQ9H2C0 597 aa15.98■□□□□ 0.15
CUL1-201ENST00000325222 VEZTQ9HBM0 779 aa15.98■□□□□ 0.15
CUL1-201ENST00000325222 IRF6O14896 467 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 KIF4AO95239 1232 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 SSBP05455 408 aaKnown RBP eCLIP15.97■□□□□ 0.15
CUL1-201ENST00000325222 ACTN1P12814 892 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 TNNC1P63316 161 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 MAP2K1Q02750 393 aaPredicted RBP15.97■□□□□ 0.15
CUL1-201ENST00000325222 DPY19L2P1Q6NXN4 242 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 KIRREL3Q8IZU9 778 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 FUKQ8N0W3 1084 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 SEC16BQ96JE7 1060 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 MKNK2Q9HBH9 465 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 SART1O43290 800 aaKnown RBP15.97■□□□□ 0.15
CUL1-201ENST00000325222 CEP104O60308 925 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 FGFR1OPO95684 399 aaKnown RBP15.97■□□□□ 0.15
CUL1-201ENST00000325222 TSPY3P0CV98 308 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 TSPY8P0CW00 308 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 CTNNA1P35221 906 aaKnown RBP15.97■□□□□ 0.15
CUL1-201ENST00000325222 COASYQ13057 564 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 GRIK5Q16478 980 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 WLSQ5T9L3 541 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 ZNF571Q7Z3V5 609 aaPredicted RBP15.97■□□□□ 0.15
CUL1-201ENST00000325222 CEP57Q86XR8 500 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 LRRC57Q8N9N7 239 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 CCDC114Q96M63 670 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 PIGSQ96S52 555 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 STK17AQ9UEE5 414 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 NOVA2Q9UNW9 492 aaKnown RBP15.97■□□□□ 0.15
CUL1-201ENST00000325222 ABCA3Q99758 1704 aa15.97■□□□□ 0.15
CUL1-201ENST00000325222 PHF20L1A8MW92 1017 aa15.96■□□□□ 0.15
CUL1-201ENST00000325222 SARNPP82979 210 aaKnown RBP15.96■□□□□ 0.15
CUL1-201ENST00000325222 PTK2Q05397 1052 aa15.96■□□□□ 0.15
CUL1-201ENST00000325222 KLHL30Q0D2K2 578 aa15.96■□□□□ 0.15
CUL1-201ENST00000325222 RPS6KA1Q15418 735 aa15.96■□□□□ 0.15
CUL1-201ENST00000325222 CALCRLQ16602 461 aa15.96■□□□□ 0.15
CUL1-201ENST00000325222 CYB5D1Q6P9G0 228 aa15.96■□□□□ 0.15
CUL1-201ENST00000325222 CCDC121Q6ZUS5 278 aa15.96■□□□□ 0.15
CUL1-201ENST00000325222 TRIM59Q8IWR1 403 aa15.96■□□□□ 0.15
CUL1-201ENST00000325222 NELFCDQ8IXH7 590 aa15.96■□□□□ 0.15
CUL1-201ENST00000325222 BTG4Q9NY30 223 aa15.96■□□□□ 0.15
CUL1-201ENST00000325222 MYH14Q7Z406 1995 aaKnown RBP15.96■□□□□ 0.15
CUL1-201ENST00000325222 DAPK3O43293 454 aa15.96■□□□□ 0.15
CUL1-201ENST00000325222 ATP2C2O75185 946 aa15.96■□□□□ 0.15
CUL1-201ENST00000325222 RASA1P20936 1047 aa15.96■□□□□ 0.15
CUL1-201ENST00000325222 MYOCDQ8IZQ8 938 aa15.96■□□□□ 0.15
CUL1-201ENST00000325222 METTL13Q8N6R0 699 aa15.96■□□□□ 0.15
CUL1-201ENST00000325222 UIMC1Q96RL1 719 aa15.96■□□□□ 0.15
CUL1-201ENST00000325222 SPZ1Q9BXG8 430 aa15.96■□□□□ 0.15
CUL1-201ENST00000325222 UBA5Q9GZZ9 404 aa15.96■□□□□ 0.15
CUL1-201ENST00000325222 AIPL1Q9NZN9 384 aa15.96■□□□□ 0.15
CUL1-201ENST00000325222 TPX2Q9ULW0 747 aaKnown RBP15.96■□□□□ 0.15
CUL1-201ENST00000325222 MYH4Q9Y623 1939 aa15.96■□□□□ 0.14
CUL1-201ENST00000325222 C5orf60A6NFR6 353 aa15.96■□□□□ 0.14
CUL1-201ENST00000325222 PDE6BP35913 854 aa15.96■□□□□ 0.14
CUL1-201ENST00000325222 FXR2P51116 673 aaKnown RBP eCLIP15.96■□□□□ 0.142e-6■■■■□ 26.3
CUL1-201ENST00000325222 USP11P51784 963 aa15.96■□□□□ 0.14
CUL1-201ENST00000325222 FKBP3Q00688 224 aaKnown RBP15.96■□□□□ 0.14
CUL1-201ENST00000325222 CACNB1Q02641 598 aaPredicted RBP15.96■□□□□ 0.14
CUL1-201ENST00000325222 TMEM119Q4V9L6 283 aa15.96■□□□□ 0.14
CUL1-201ENST00000325222 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.96■□□□□ 0.14
CUL1-201ENST00000325222 IRF2BP2Q7Z5L9 587 aa15.96■□□□□ 0.14
CUL1-201ENST00000325222 CEP120Q8N960 986 aa15.96■□□□□ 0.14
CUL1-201ENST00000325222 MDM1Q8TC05 714 aa15.96■□□□□ 0.14
CUL1-201ENST00000325222 SNX29Q8TEQ0 813 aa15.96■□□□□ 0.14
CUL1-201ENST00000325222 C6orf50Q9HD87 102 aa15.96■□□□□ 0.14
CUL1-201ENST00000325222 RIC8AQ9NPQ8 531 aa15.96■□□□□ 0.14
CUL1-201ENST00000325222 AMACRQ9UHK6 382 aa15.96■□□□□ 0.14
CUL1-201ENST00000325222 ODF2LQ9ULJ1 636 aa15.96■□□□□ 0.14
CUL1-201ENST00000325222 LAMB2P55268 1798 aa15.96■□□□□ 0.14
CUL1-201ENST00000325222 CCDC88AQ3V6T2 1871 aa15.95■□□□□ 0.14
CUL1-201ENST00000325222 NPHP3-ACAD11A0A0J9YXS1 232 aa15.95■□□□□ 0.14
CUL1-201ENST00000325222 F8W031 263 aaPredicted RBP15.95■□□□□ 0.14
CUL1-201ENST00000325222 CELF4Q9BZC1 486 aaKnown RBP15.95■□□□□ 0.14
CUL1-201ENST00000325222 SAP30BPQ9UHR5 308 aaKnown RBP15.95■□□□□ 0.14
CUL1-201ENST00000325222 C21orf2O43822 256 aa15.95■□□□□ 0.14
CUL1-201ENST00000325222 CALRP27797 417 aaKnown RBP15.95■□□□□ 0.14
CUL1-201ENST00000325222 HIBADHP31937 336 aaKnown RBP15.95■□□□□ 0.14
CUL1-201ENST00000325222 SCTRP47872 440 aa15.95■□□□□ 0.14
CUL1-201ENST00000325222 MAGOHP61326 146 aaKnown RBP15.95■□□□□ 0.14
CUL1-201ENST00000325222 PPP2R2AP63151 447 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms