RNA–Protein interactions for RNA: ENST00000321337.11

SENP3-201, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SENP3, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-201ENST00000321337 PAGR1Q9BTK6 254 aa27.75■■■□□ 2.03
SENP3-201ENST00000321337 BCCIPQ9P287 314 aaKnown RBP eCLIP27.75■■■□□ 2.03
SENP3-201ENST00000321337 DCDC2CA8MYV0 355 aa27.74■■■□□ 2.03
SENP3-201ENST00000321337 FAM107AO95990 144 aa27.74■■■□□ 2.03
SENP3-201ENST00000321337 ITGA4P13612 1032 aa27.74■■■□□ 2.03
SENP3-201ENST00000321337 TNNC1P63316 161 aa27.74■■■□□ 2.03
SENP3-201ENST00000321337 ZNF844Q08AG5 666 aa27.74■■■□□ 2.03
SENP3-201ENST00000321337 RPS6KA1Q15418 735 aa27.74■■■□□ 2.03
SENP3-201ENST00000321337 ASIC2Q16515 512 aa27.74■■■□□ 2.03
SENP3-201ENST00000321337 ZNF571Q7Z3V5 609 aaPredicted RBP27.74■■■□□ 2.03
SENP3-201ENST00000321337 PROM2Q8N271 834 aa27.74■■■□□ 2.03
SENP3-201ENST00000321337 MYCBPQ99417 103 aaPredicted RBP27.74■■■□□ 2.03
SENP3-201ENST00000321337 PLCB1Q9NQ66 1216 aa27.74■■■□□ 2.03
SENP3-201ENST00000321337 CNOT8Q9UFF9 292 aaKnown RBP27.74■■■□□ 2.03
SENP3-201ENST00000321337 ZNF335Q9H4Z2 1342 aaPredicted RBP27.74■■■□□ 2.03
SENP3-201ENST00000321337 SPTY2D1Q68D10 685 aaPredicted RBP27.74■■■□□ 2.03
SENP3-201ENST00000321337 CYFIP2Q96F07 1278 aa27.74■■■□□ 2.03
SENP3-201ENST00000321337 JPH2Q9BR39 696 aaPredicted RBP27.74■■■□□ 2.03
SENP3-201ENST00000321337 SRP68Q9UHB9 627 aaKnown RBP27.74■■■□□ 2.03
SENP3-201ENST00000321337 KIF4AO95239 1232 aa27.73■■■□□ 2.03
SENP3-201ENST00000321337 SLC9A1P19634 815 aa27.73■■■□□ 2.03
SENP3-201ENST00000321337 PSMD2Q13200 908 aa27.73■■■□□ 2.03
SENP3-201ENST00000321337 EIF6P56537 245 aaKnown RBP27.73■■■□□ 2.03
SENP3-201ENST00000321337 C6orf89Q6UWU4 347 aa27.73■■■□□ 2.03
SENP3-201ENST00000321337 CCDC13Q8IYE1 715 aa27.73■■■□□ 2.03
SENP3-201ENST00000321337 TAF4BQ92750 862 aa27.73■■■□□ 2.03
SENP3-201ENST00000321337 PCDHA2Q9Y5H9 948 aa27.73■■■□□ 2.03
SENP3-201ENST00000321337 SLC10A5Q5PT55 438 aa27.72■■■□□ 2.03
SENP3-201ENST00000321337 CHADLQ6NUI6 762 aa27.72■■■□□ 2.03
SENP3-201ENST00000321337 NEDD1Q8NHV4 660 aa27.72■■■□□ 2.03
SENP3-201ENST00000321337 SCFD2Q8WU76 684 aa27.72■■■□□ 2.03
SENP3-201ENST00000321337 SCFD1Q8WVM8 642 aa27.72■■■□□ 2.03
SENP3-201ENST00000321337 NLRP3Q96P20 1036 aa27.72■■■□□ 2.03
SENP3-201ENST00000321337 ANKRD2Q9GZV1 360 aa27.72■■■□□ 2.03
SENP3-201ENST00000321337 AIPL1Q9NZN9 384 aa27.72■■■□□ 2.03
SENP3-201ENST00000321337 ACTN3Q08043 901 aaPredicted RBP27.72■■■□□ 2.03
SENP3-201ENST00000321337 PDIA5Q14554 519 aa27.72■■■□□ 2.03
SENP3-201ENST00000321337 DDB1Q16531 1140 aa27.72■■■□□ 2.03
SENP3-201ENST00000321337 NUCKS1Q9H1E3 243 aaKnown RBP27.72■■■□□ 2.03
SENP3-201ENST00000321337 MAST2Q6P0Q8 1798 aa27.72■■■□□ 2.03
SENP3-201ENST00000321337 ADCY7P51828 1080 aa27.71■■■□□ 2.03
SENP3-201ENST00000321337 GSCP56915 257 aaPredicted RBP27.71■■■□□ 2.03
SENP3-201ENST00000321337 IRF2BP2Q7Z5L9 587 aa27.71■■■□□ 2.03
SENP3-201ENST00000321337 CCDC91Q7Z6B0 441 aa27.71■■■□□ 2.03
SENP3-201ENST00000321337 LRRC47Q8N1G4 583 aaKnown RBP27.71■■■□□ 2.03
SENP3-201ENST00000321337 VCPKMTQ9H867 229 aa27.71■■■□□ 2.03
SENP3-201ENST00000321337 SLC12A6Q9UHW9 1150 aa27.71■■■□□ 2.03
SENP3-201ENST00000321337 FBXL5Q9UKA1 691 aa27.71■■■□□ 2.03
SENP3-201ENST00000321337 GCOM1H8Y6P7 765 aaPredicted RBP27.71■■■□□ 2.03
SENP3-201ENST00000321337 SART1O43290 800 aaKnown RBP27.71■■■□□ 2.03
SENP3-201ENST00000321337 MYZAPP0CAP1 466 aa27.71■■■□□ 2.03
SENP3-201ENST00000321337 ZBTB48P10074 688 aaPredicted RBP27.71■■■□□ 2.03
SENP3-201ENST00000321337 CTNNA1P35221 906 aaKnown RBP27.71■■■□□ 2.03
SENP3-201ENST00000321337 KCNH2Q12809 1159 aa27.71■■■□□ 2.03
SENP3-201ENST00000321337 MICALCLQ6ZW33 695 aa27.71■■■□□ 2.03
SENP3-201ENST00000321337 YTHDF3Q7Z739 585 aaKnown RBP27.71■■■□□ 2.03
SENP3-201ENST00000321337 LUC7LQ9NQ29 371 aaKnown RBP27.71■■■□□ 2.03
SENP3-201ENST00000321337 DDX20Q9UHI6 824 aaKnown RBP27.71■■■□□ 2.03
SENP3-201ENST00000321337 DPY19L2P1Q6NXN4 242 aa27.71■■■□□ 2.03
SENP3-201ENST00000321337 SPATS2Q86XZ4 545 aaKnown RBP27.71■■■□□ 2.03
SENP3-201ENST00000321337 METTL13Q8N6R0 699 aa27.71■■■□□ 2.03
SENP3-201ENST00000321337 RTFDC1Q9BY42 306 aaPredicted RBP27.71■■■□□ 2.03
SENP3-201ENST00000321337 KCTD10Q9H3F6 313 aa27.71■■■□□ 2.03
SENP3-201ENST00000321337 RIOX1Q9H6W3 641 aa27.71■■■□□ 2.03
SENP3-201ENST00000321337 GPCPD1Q9NPB8 672 aa27.71■■■□□ 2.03
SENP3-201ENST00000321337 AJAP1Q9UKB5 411 aaPredicted RBP27.71■■■□□ 2.03
SENP3-201ENST00000321337 BAG3O95817 575 aa27.7■■■□□ 2.02
SENP3-201ENST00000321337 C16orf86Q6ZW13 317 aa27.7■■■□□ 2.02
SENP3-201ENST00000321337 LRRC57Q8N9N7 239 aa27.7■■■□□ 2.02
SENP3-201ENST00000321337 AMACRQ9UHK6 382 aa27.7■■■□□ 2.02
SENP3-201ENST00000321337 MYH4Q9Y623 1939 aa27.7■■■□□ 2.02
SENP3-201ENST00000321337 ESYT2A0FGR8 921 aa27.7■■■□□ 2.02
SENP3-201ENST00000321337 DAPK3O43293 454 aa27.7■■■□□ 2.02
SENP3-201ENST00000321337 PDHBP11177 359 aa27.7■■■□□ 2.02
SENP3-201ENST00000321337 BTDP43251 543 aa27.7■■■□□ 2.02
SENP3-201ENST00000321337 USP11P51784 963 aa27.7■■■□□ 2.02
SENP3-201ENST00000321337 CASP5P51878 434 aa27.7■■■□□ 2.02
SENP3-201ENST00000321337 ADAM9Q13443 819 aa27.7■■■□□ 2.02
SENP3-201ENST00000321337 PPP4R3AQ6IN85 833 aa27.7■■■□□ 2.02
SENP3-201ENST00000321337 UBLCP1Q8WVY7 318 aaPredicted RBP27.7■■■□□ 2.02
SENP3-201ENST00000321337 CELF4Q9BZC1 486 aaKnown RBP27.7■■■□□ 2.02
SENP3-201ENST00000321337 ZHX3Q9H4I2 956 aa27.7■■■□□ 2.02
SENP3-201ENST00000321337 KIAA1024Q9UPX6 916 aa27.7■■■□□ 2.02
SENP3-201ENST00000321337 GOLGA6L10A6NI86 522 aa27.69■■■□□ 2.02
SENP3-201ENST00000321337 PPP1R11O60927 126 aaPredicted RBP27.69■■■□□ 2.02
SENP3-201ENST00000321337 TM4SF1P30408 202 aa27.69■■■□□ 2.02
SENP3-201ENST00000321337 HERC4Q5GLZ8 1057 aaPredicted RBP27.69■■■□□ 2.02
SENP3-201ENST00000321337 C1orf131Q8NDD1 294 aaKnown RBP27.69■■■□□ 2.02
SENP3-201ENST00000321337 RBM46Q8TBY0 533 aaKnown RBP27.69■■■□□ 2.02
SENP3-201ENST00000321337 NOC2LQ9Y3T9 749 aaKnown RBP27.69■■■□□ 2.02
SENP3-201ENST00000321337 OSBPL7Q9BZF2 842 aa27.69■■■□□ 2.02
SENP3-201ENST00000321337 RAB34Q9BZG1 259 aa27.69■■■□□ 2.02
SENP3-201ENST00000321337 ANKIB1Q9P2G1 1089 aa27.69■■■□□ 2.02
SENP3-201ENST00000321337 DDX25Q9UHL0 483 aaKnown RBP27.69■■■□□ 2.02
SENP3-201ENST00000321337 DDX60LQ5H9U9 1706 aaKnown RBP27.68■■■□□ 2.02
SENP3-201ENST00000321337 POTEB3A0JP26 581 aa27.68■■■□□ 2.02
SENP3-201ENST00000321337 POTECB2RU33 542 aa27.68■■■□□ 2.02
SENP3-201ENST00000321337 IBSPP21815 317 aaPredicted RBP27.68■■■□□ 2.02
SENP3-201ENST00000321337 USP8P40818 1118 aa27.68■■■□□ 2.02
SENP3-201ENST00000321337 PPP4CP60510 307 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms