RNA–Protein interactions for RNA: ENST00000320895.9

CLPTM1L-201, Transcript of CLPTM1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1L, Length 2,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-201ENST00000320895 PIM2Q9P1W9 311 aa26.75■■□□□ 1.87
CLPTM1L-201ENST00000320895 POLR2FP61218 127 aaKnown RBP26.75■■□□□ 1.87
CLPTM1L-201ENST00000320895 TUBB2AQ13885 445 aa26.75■■□□□ 1.87
CLPTM1L-201ENST00000320895 FIGNQ5HY92 759 aa26.75■■□□□ 1.87
CLPTM1L-201ENST00000320895 COG1Q8WTW3 980 aa26.75■■□□□ 1.87
CLPTM1L-201ENST00000320895 MKL1Q969V6 931 aa26.75■■□□□ 1.87
CLPTM1L-201ENST00000320895 TUBB2BQ9BVA1 445 aa26.75■■□□□ 1.87
CLPTM1L-201ENST00000320895 COL4A5P29400 1685 aa26.74■■□□□ 1.87
CLPTM1L-201ENST00000320895 PSMD2Q13200 908 aa26.74■■□□□ 1.87
CLPTM1L-201ENST00000320895 KIAA1755Q5JYT7 1200 aa26.74■■□□□ 1.87
CLPTM1L-201ENST00000320895 PAPD7Q5XG87 772 aaKnown RBP26.74■■□□□ 1.87
CLPTM1L-201ENST00000320895 FBXO11Q86XK2 927 aa26.74■■□□□ 1.87
CLPTM1L-201ENST00000320895 CCDC65Q8IXS2 484 aa26.74■■□□□ 1.87
CLPTM1L-201ENST00000320895 DCAF4Q8WV16 495 aa26.74■■□□□ 1.87
CLPTM1L-201ENST00000320895 AMNQ9BXJ7 453 aa26.74■■□□□ 1.87
CLPTM1L-201ENST00000320895 NT5C3AQ9H0P0 336 aa26.74■■□□□ 1.87
CLPTM1L-201ENST00000320895 DHX36Q9H2U1 1008 aaKnown RBP26.74■■□□□ 1.87
CLPTM1L-201ENST00000320895 RGL1Q9NZL6 768 aa26.74■■□□□ 1.87
CLPTM1L-201ENST00000320895 L1RE1Q9UN81 338 aa26.74■■□□□ 1.87
CLPTM1L-201ENST00000320895 SMCHD1A6NHR9 2005 aa26.74■■□□□ 1.87
CLPTM1L-201ENST00000320895 FGFR1OPO95684 399 aaKnown RBP26.74■■□□□ 1.87
CLPTM1L-201ENST00000320895 CSRNP1Q96S65 589 aa26.74■■□□□ 1.87
CLPTM1L-201ENST00000320895 ZBTB12Q9Y330 459 aaPredicted RBP26.74■■□□□ 1.87
CLPTM1L-201ENST00000320895 MAP2K7O14733 419 aa26.73■■□□□ 1.87
CLPTM1L-201ENST00000320895 TATDN1Q6P1N9 297 aa26.73■■□□□ 1.87
CLPTM1L-201ENST00000320895 SPDYE3A6NKU9 549 aa26.73■■□□□ 1.87
CLPTM1L-201ENST00000320895 OPLAHO14841 1288 aa26.73■■□□□ 1.87
CLPTM1L-201ENST00000320895 ATP8B1O43520 1251 aa26.73■■□□□ 1.87
CLPTM1L-201ENST00000320895 NOL4O94818 638 aa26.73■■□□□ 1.87
CLPTM1L-201ENST00000320895 SLC12A3P55017 1021 aa26.73■■□□□ 1.87
CLPTM1L-201ENST00000320895 NAP1L1P55209 391 aaKnown RBP26.73■■□□□ 1.87
CLPTM1L-201ENST00000320895 ADAM9Q13443 819 aa26.73■■□□□ 1.87
CLPTM1L-201ENST00000320895 NFRKBQ6P4R8 1299 aa26.73■■□□□ 1.87
CLPTM1L-201ENST00000320895 CCDC84Q86UT8 332 aaPredicted RBP26.73■■□□□ 1.87
CLPTM1L-201ENST00000320895 CDAN1Q8IWY9 1227 aa26.73■■□□□ 1.87
CLPTM1L-201ENST00000320895 ETNPPLQ8TBG4 499 aa26.73■■□□□ 1.87
CLPTM1L-201ENST00000320895 LRRC27Q9C0I9 530 aa26.73■■□□□ 1.87
CLPTM1L-201ENST00000320895 ARFGEF1Q9Y6D6 1849 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 LRRIQ3A6PVS8 624 aaPredicted RBP26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 ZBTB39O15060 712 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 CHMP2AO43633 222 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 KIF20AO95235 890 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 ACTN1P12814 892 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 MAGEA1P43355 309 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 SPIRE1Q08AE8 756 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 SYDE2Q5VT97 1194 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 CC2D2BQ6DHV5 1058 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 TMEM179Q6ZVK1 233 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 ACER1Q8TDN7 264 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 LENG9Q96B70 501 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 IDI2Q9BXS1 227 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 BCS1LQ9Y276 419 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 TLR2O60603 784 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 PRPF6O94906 941 aaKnown RBP26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 SPATA31C1P0DKV0 1188 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 USP11P51784 963 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 KCNA1Q09470 495 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 PDXDC1Q6P996 788 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 RTKN2Q8IZC4 609 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 SUPT20HQ8NEM7 779 aa26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.72■■□□□ 1.87
CLPTM1L-201ENST00000320895 KDM3AQ9Y4C1 1321 aa26.71■■□□□ 1.87
CLPTM1L-201ENST00000320895 CCDC174Q6PII3 467 aa26.71■■□□□ 1.87
CLPTM1L-201ENST00000320895 HDXQ7Z353 690 aa26.71■■□□□ 1.87
CLPTM1L-201ENST00000320895 REEP2Q9BRK0 252 aa26.71■■□□□ 1.87
CLPTM1L-201ENST00000320895 KCTD10Q9H3F6 313 aa26.71■■□□□ 1.87
CLPTM1L-201ENST00000320895 PLEKHA4Q9H4M7 779 aa26.71■■□□□ 1.87
CLPTM1L-201ENST00000320895 SH2D4AQ9H788 454 aa26.71■■□□□ 1.87
CLPTM1L-201ENST00000320895 MYBP10242 640 aa26.71■■□□□ 1.87
CLPTM1L-201ENST00000320895 BMP3P12645 472 aa26.71■■□□□ 1.87
CLPTM1L-201ENST00000320895 ZNF76P36508 570 aa26.71■■□□□ 1.87
CLPTM1L-201ENST00000320895 CASP8Q14790 479 aa26.71■■□□□ 1.87
CLPTM1L-201ENST00000320895 DALRD3Q5D0E6 543 aaKnown RBP26.71■■□□□ 1.87
CLPTM1L-201ENST00000320895 FAM83BQ5T0W9 1011 aa26.71■■□□□ 1.87
CLPTM1L-201ENST00000320895 SFR1Q86XK3 245 aa26.71■■□□□ 1.87
CLPTM1L-201ENST00000320895 PIGOQ8TEQ8 1089 aa26.71■■□□□ 1.87
CLPTM1L-201ENST00000320895 PURBQ96QR8 312 aaKnown RBP26.71■■□□□ 1.87
CLPTM1L-201ENST00000320895 SIPA1L1O43166 1804 aa26.71■■□□□ 1.87
CLPTM1L-201ENST00000320895 EML1O00423 815 aa26.7■■□□□ 1.87
CLPTM1L-201ENST00000320895 MSH4O15457 936 aa26.7■■□□□ 1.87
CLPTM1L-201ENST00000320895 ERLIN1O75477 346 aa26.7■■□□□ 1.87
CLPTM1L-201ENST00000320895 USP14P54578 494 aa26.7■■□□□ 1.87
CLPTM1L-201ENST00000320895 HYIQ5T013 277 aa26.7■■□□□ 1.87
CLPTM1L-201ENST00000320895 RBM26Q5T8P6 1007 aaKnown RBP26.7■■□□□ 1.87
CLPTM1L-201ENST00000320895 HGSNATQ68CP4 663 aa26.7■■□□□ 1.87
CLPTM1L-201ENST00000320895 CFBP00751 764 aa26.7■■□□□ 1.86
CLPTM1L-201ENST00000320895 MYBL2P10244 700 aa26.7■■□□□ 1.86
CLPTM1L-201ENST00000320895 HNRNPH3P31942 346 aaKnown RBP26.7■■□□□ 1.86
CLPTM1L-201ENST00000320895 HNRNPLLQ8WVV9 542 aaKnown RBP26.7■■□□□ 1.86
CLPTM1L-201ENST00000320895 BHMT2Q9H2M3 363 aa26.7■■□□□ 1.86
CLPTM1L-201ENST00000320895 POTEB2H3BUK9 544 aa26.69■■□□□ 1.86
CLPTM1L-201ENST00000320895 USO1O60763 962 aaKnown RBP26.69■■□□□ 1.86
CLPTM1L-201ENST00000320895 NR2F2P24468 414 aa26.69■■□□□ 1.86
CLPTM1L-201ENST00000320895 TNNT3P45378 269 aaPredicted RBP26.69■■□□□ 1.86
CLPTM1L-201ENST00000320895 CDK17Q00537 523 aa26.69■■□□□ 1.86
CLPTM1L-201ENST00000320895 RAPGEF1Q13905 1077 aa26.69■■□□□ 1.86
CLPTM1L-201ENST00000320895 GIT2Q14161 759 aa26.69■■□□□ 1.86
CLPTM1L-201ENST00000320895 HDAC7Q8WUI4 952 aa26.69■■□□□ 1.86
CLPTM1L-201ENST00000320895 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.69■■□□□ 1.86
CLPTM1L-201ENST00000320895 VPS18Q9P253 973 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms