RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 PCDHA6Q9UN73 950 aa17.95■□□□□ 0.46
CLIP4-201ENST00000320081 PCDHA8Q9Y5H6 950 aa17.95■□□□□ 0.46
CLIP4-201ENST00000320081 FGGP02679 453 aa17.95■□□□□ 0.46
CLIP4-201ENST00000320081 MARK3P27448 753 aa17.95■□□□□ 0.46
CLIP4-201ENST00000320081 COASYQ13057 564 aa17.95■□□□□ 0.46
CLIP4-201ENST00000320081 EARS2Q5JPH6 523 aaKnown RBP17.95■□□□□ 0.46
CLIP4-201ENST00000320081 DNAAF5Q86Y56 855 aa17.95■□□□□ 0.46
CLIP4-201ENST00000320081 NOA1Q8NC60 698 aaKnown RBP17.95■□□□□ 0.46
CLIP4-201ENST00000320081 APOL6Q9BWW8 343 aa17.95■□□□□ 0.46
CLIP4-201ENST00000320081 ZNF341Q9BYN7 854 aa17.95■□□□□ 0.46
CLIP4-201ENST00000320081 RAB17Q9H0T7 212 aa17.95■□□□□ 0.46
CLIP4-201ENST00000320081 MED4Q9NPJ6 270 aa17.95■□□□□ 0.46
CLIP4-201ENST00000320081 UTYO14607 1347 aa17.94■□□□□ 0.46
CLIP4-201ENST00000320081 TADA3O75528 432 aa17.94■□□□□ 0.46
CLIP4-201ENST00000320081 CD44P16070 742 aaKnown RBP17.94■□□□□ 0.46
CLIP4-201ENST00000320081 TOB1P50616 345 aaPredicted RBP17.94■□□□□ 0.46
CLIP4-201ENST00000320081 NOVA2Q9UNW9 492 aaKnown RBP17.94■□□□□ 0.46
CLIP4-201ENST00000320081 LMTK2Q8IWU2 1503 aa17.94■□□□□ 0.46
CLIP4-201ENST00000320081 COL3A1P02461 1466 aaPredicted RBP17.94■□□□□ 0.46
CLIP4-201ENST00000320081 MYO1FO00160 1098 aa17.94■□□□□ 0.46
CLIP4-201ENST00000320081 ZBTB5O15062 677 aa17.94■□□□□ 0.46
CLIP4-201ENST00000320081 FOSP01100 380 aaPredicted RBP17.94■□□□□ 0.46
CLIP4-201ENST00000320081 ACTN1P12814 892 aa17.94■□□□□ 0.46
CLIP4-201ENST00000320081 PDE6CP51160 858 aa17.94■□□□□ 0.46
CLIP4-201ENST00000320081 MKRN3Q13064 507 aaKnown RBP17.94■□□□□ 0.46
CLIP4-201ENST00000320081 DMP1Q13316 513 aaPredicted RBP17.94■□□□□ 0.46
CLIP4-201ENST00000320081 HP1BP3Q5SSJ5 553 aaPredicted RBP17.94■□□□□ 0.46
CLIP4-201ENST00000320081 UNC13DQ70J99 1090 aa17.94■□□□□ 0.46
CLIP4-201ENST00000320081 SESTD1Q86VW0 696 aa17.94■□□□□ 0.46
CLIP4-201ENST00000320081 LINC00116Q8NCU8 138 aa17.94■□□□□ 0.46
CLIP4-201ENST00000320081 MPHOSPH6Q99547 160 aaKnown RBP17.94■□□□□ 0.46
CLIP4-201ENST00000320081 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.94■□□□□ 0.46
CLIP4-201ENST00000320081 FAM169AQ9Y6X4 670 aa17.94■□□□□ 0.46
CLIP4-201ENST00000320081 THAP12O43422 761 aa17.94■□□□□ 0.46
CLIP4-201ENST00000320081 CHRNA5P30532 468 aa17.94■□□□□ 0.46
CLIP4-201ENST00000320081 GGCXP38435 758 aa17.94■□□□□ 0.46
CLIP4-201ENST00000320081 TROAPQ12815 778 aa17.94■□□□□ 0.46
CLIP4-201ENST00000320081 Q3C1V9 767 aa17.94■□□□□ 0.46
CLIP4-201ENST00000320081 FOXP4Q8IVH2 680 aaPredicted RBP17.94■□□□□ 0.46
CLIP4-201ENST00000320081 PHF20Q9BVI0 1012 aa17.94■□□□□ 0.46
CLIP4-201ENST00000320081 SNX24Q9Y343 169 aa17.94■□□□□ 0.46
CLIP4-201ENST00000320081 DAAM1Q9Y4D1 1078 aa17.94■□□□□ 0.46
CLIP4-201ENST00000320081 HHATQ5VTY9 493 aa17.93■□□□□ 0.46
CLIP4-201ENST00000320081 SCARA5Q6ZMJ2 495 aa17.93■□□□□ 0.46
CLIP4-201ENST00000320081 ARHGEF2Q92974 986 aaKnown RBP17.93■□□□□ 0.46
CLIP4-201ENST00000320081 ADD3Q9UEY8 706 aaKnown RBP17.93■□□□□ 0.46
CLIP4-201ENST00000320081 DUSP10Q9Y6W6 482 aa17.93■□□□□ 0.46
CLIP4-201ENST00000320081 CLTCQ00610 1675 aaKnown RBP17.93■□□□□ 0.46
CLIP4-201ENST00000320081 INO80B-WBP1J3KQ70 363 aa17.93■□□□□ 0.46
CLIP4-201ENST00000320081 KCTD19Q17RG1 926 aaPredicted RBP17.93■□□□□ 0.46
CLIP4-201ENST00000320081 KRT27Q7Z3Y8 459 aa17.93■□□□□ 0.46
CLIP4-201ENST00000320081 ZBTB33Q86T24 672 aa17.93■□□□□ 0.46
CLIP4-201ENST00000320081 TBC1D31Q96DN5 1066 aa17.93■□□□□ 0.46
CLIP4-201ENST00000320081 HEMGNQ9BXL5 484 aa17.93■□□□□ 0.46
CLIP4-201ENST00000320081 INO80BQ9C086 356 aaPredicted RBP17.93■□□□□ 0.46
CLIP4-201ENST00000320081 TUBE1Q9UJT0 475 aa17.93■□□□□ 0.46
CLIP4-201ENST00000320081 GYPCP04921 128 aa17.93■□□□□ 0.46
CLIP4-201ENST00000320081 PLEKP08567 350 aaPredicted RBP17.93■□□□□ 0.46
CLIP4-201ENST00000320081 C3orf67Q6ZVT6 689 aa17.93■□□□□ 0.46
CLIP4-201ENST00000320081 PASD1Q8IV76 773 aa17.93■□□□□ 0.46
CLIP4-201ENST00000320081 FMNL3Q8IVF7 1028 aa17.93■□□□□ 0.46
CLIP4-201ENST00000320081 PPM1EQ8WY54 764 aa17.93■□□□□ 0.46
CLIP4-201ENST00000320081 PGRMC1O00264 195 aaKnown RBP17.92■□□□□ 0.46
CLIP4-201ENST00000320081 NSFP46459 744 aaKnown RBP17.92■□□□□ 0.46
CLIP4-201ENST00000320081 MXI1P50539 228 aa17.92■□□□□ 0.46
CLIP4-201ENST00000320081 IFRD2Q12894 506 aaPredicted RBP17.92■□□□□ 0.46
CLIP4-201ENST00000320081 E2F5Q15329 346 aa17.92■□□□□ 0.46
CLIP4-201ENST00000320081 GADL1Q6ZQY3 521 aa17.92■□□□□ 0.46
CLIP4-201ENST00000320081 CCDC89Q8N998 374 aa17.92■□□□□ 0.46
CLIP4-201ENST00000320081 INO80Q9ULG1 1556 aaPredicted RBP17.92■□□□□ 0.46
CLIP4-201ENST00000320081 ACSL3O95573 720 aa17.92■□□□□ 0.46
CLIP4-201ENST00000320081 TAL1P17542 331 aaPredicted RBP17.92■□□□□ 0.46
CLIP4-201ENST00000320081 PTPAQ15257 358 aa17.92■□□□□ 0.46
CLIP4-201ENST00000320081 SMAD1Q15797 465 aaKnown RBP17.92■□□□□ 0.46
CLIP4-201ENST00000320081 ZBTB12Q9Y330 459 aaPredicted RBP17.92■□□□□ 0.46
CLIP4-201ENST00000320081 PNPLA7Q6ZV29 1317 aa17.92■□□□□ 0.46
CLIP4-201ENST00000320081 NTSR2O95665 410 aa17.92■□□□□ 0.46
CLIP4-201ENST00000320081 GRM4Q14833 912 aa17.92■□□□□ 0.46
CLIP4-201ENST00000320081 CNKSR1Q969H4 720 aa17.92■□□□□ 0.46
CLIP4-201ENST00000320081 FRMD3A2A2Y4 597 aa17.92■□□□□ 0.46
CLIP4-201ENST00000320081 VEGFAP15692 232 aaPredicted RBP17.92■□□□□ 0.46
CLIP4-201ENST00000320081 TFAMQ00059 246 aaKnown RBP17.92■□□□□ 0.46
CLIP4-201ENST00000320081 LMBRD2Q68DH5 695 aaPredicted RBP17.92■□□□□ 0.46
CLIP4-201ENST00000320081 GLYCTKQ8IVS8 523 aa17.92■□□□□ 0.46
CLIP4-201ENST00000320081 RNF34Q969K3 372 aa17.92■□□□□ 0.46
CLIP4-201ENST00000320081 FERMT1Q9BQL6 677 aa17.92■□□□□ 0.46
CLIP4-201ENST00000320081 BPIFA3Q9BQP9 254 aa17.92■□□□□ 0.46
CLIP4-201ENST00000320081 TRPC5Q9UL62 973 aaPredicted RBP17.92■□□□□ 0.46
CLIP4-201ENST00000320081 CCDC160A6NGH7 325 aa17.91■□□□□ 0.46
CLIP4-201ENST00000320081 CTNND1O60716 968 aaKnown RBP17.91■□□□□ 0.46
CLIP4-201ENST00000320081 NMT1P30419 496 aaKnown RBP17.91■□□□□ 0.46
CLIP4-201ENST00000320081 CACNA2D3Q8IZS8 1091 aa17.91■□□□□ 0.46
CLIP4-201ENST00000320081 SH2D3CQ8N5H7 860 aa17.91■□□□□ 0.46
CLIP4-201ENST00000320081 GOLGA5Q8TBA6 731 aa17.91■□□□□ 0.46
CLIP4-201ENST00000320081 TRIM7Q9C029 511 aa17.91■□□□□ 0.46
CLIP4-201ENST00000320081 LIMA1Q9UHB6 759 aaKnown RBP17.91■□□□□ 0.46
CLIP4-201ENST00000320081 MRFAP1Q9Y605 127 aa17.91■□□□□ 0.46
CLIP4-201ENST00000320081 GCFC2P16383 781 aaKnown RBP17.91■□□□□ 0.46
CLIP4-201ENST00000320081 DYDC2Q96IM9 177 aa17.91■□□□□ 0.46
CLIP4-201ENST00000320081 SMC6Q96SB8 1091 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms