RNA–Protein interactions for RNA: ENST00000319406.8

LCLAT1-202, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2 BASIC

Gene LCLAT1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-202ENST00000319406 NNTQ13423 1086 aa11.19□□□□□ -0.62
LCLAT1-202ENST00000319406 CEP85LQ5SZL2 805 aa11.19□□□□□ -0.62
LCLAT1-202ENST00000319406 HYIQ5T013 277 aa11.19□□□□□ -0.62
LCLAT1-202ENST00000319406 KCNQ5Q9NR82 932 aa11.19□□□□□ -0.62
LCLAT1-202ENST00000319406 PCDHAC2Q9Y5I4 1007 aa11.19□□□□□ -0.62
LCLAT1-202ENST00000319406 INHBEP58166 350 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 FKBP1AP62942 108 aaKnown RBP11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 SHROOM1Q2M3G4 852 aaPredicted RBP11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 FOXR2Q6PJQ5 311 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 C6orf89Q6UWU4 347 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 SV2BQ7L1I2 683 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 SH3BP5LQ7L8J4 393 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 SPATS2Q86XZ4 545 aaKnown RBP11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 SIAH1Q8IUQ4 282 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 RETREG2Q8NC44 543 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 MASTLQ96GX5 879 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 CCDC17Q96LX7 622 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 CCT8L2Q96SF2 557 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 IDI2Q9BXS1 227 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 AGPAT5Q9NUQ2 364 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 LUC7L2Q9Y383 392 aaKnown RBP11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 FRMD3A2A2Y4 597 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 SLC16A2P36021 539 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 KLK7P49862 253 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 PODNQ7Z5L7 613 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 CEP57Q86XR8 500 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 GUF1Q8N442 669 aaKnown RBP11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 MMGT1Q8N4V1 131 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 CRYGNQ8WXF5 182 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 CCDC47Q96A33 483 aaKnown RBP11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 MBOAT7Q96N66 472 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 JADE2Q9NQC1 790 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 SMARCAL1Q9NZC9 954 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 FAM198AQ9UFP1 575 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 ABCB11O95342 1321 aa11.18□□□□□ -0.62
LCLAT1-202ENST00000319406 ZNF233A6NK53 670 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 PLSCR1O15162 318 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 NPM3O75607 178 aaKnown RBP11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 HLA-DOAP06340 250 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 PDE6BP35913 854 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 TNNI2P48788 182 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 PTGISQ16647 500 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 TMEM266Q2M3C6 531 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 ALS2CLQ60I27 953 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 TATDN1Q6P1N9 297 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 TLDC1Q6P9B6 456 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 LRRC55Q6ZSA7 311 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 KCTD1Q719H9 257 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 MYCBPAPQ8TBZ2 947 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 RNF217Q8TC41 542 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 CUL5Q93034 780 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 DNAJC19Q96DA6 116 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 EEF2KMTQ96G04 330 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 SLC39A2Q9NP94 309 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 MAGEC2Q9UBF1 373 aaPredicted RBP11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 A0A1W2PQJ5 194 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 DDTLA6NHG4 134 aaPredicted RBP11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 DNM1LO00429 736 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 IDEP14735 1019 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 HOXA7P31268 230 aaPredicted RBP11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 CRYMQ14894 314 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 C11orf91Q3C1V1 193 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 DACT2Q5SW24 774 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 KDM7AQ6ZMT4 941 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 NLRP14Q86W24 1093 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 FAM114A1Q8IWE2 563 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 FUKQ8N0W3 1084 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 SNX29Q8TEQ0 813 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 NUP58Q9BVL2 599 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 EHD2Q9NZN4 543 aa11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 DDX25Q9UHL0 483 aaKnown RBP11.17□□□□□ -0.62
LCLAT1-202ENST00000319406 SSBP05455 408 aaKnown RBP eCLIP11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 HMGB2P26583 209 aaKnown RBP11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 HNRNPH3P31942 346 aaKnown RBP11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 MATR3P43243 847 aaKnown RBP eCLIP11.16□□□□□ -0.622e-6■■■■■ 27.5
LCLAT1-202ENST00000319406 CDK17Q00537 523 aa11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 PPARDQ03181 441 aa11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 ZCWPW2Q504Y3 356 aa11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 SMCR8Q8TEV9 937 aaPredicted RBP11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 P2RX7Q99572 595 aaKnown RBP11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 RAB34Q9BZG1 259 aa11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 KCNMB3Q9NPA1 279 aa11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 NYAP2Q9P242 653 aa11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 TPX2Q9ULW0 747 aaKnown RBP11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 SIK3Q9Y2K2 1263 aa11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 MACROD2A1Z1Q3 448 aa11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 A6NNZ2 444 aa11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 HSF2BPO75031 334 aa11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 SKAP2O75563 359 aaPredicted RBP11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 PPP1R37O75864 691 aa11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 MMP10P09238 476 aa11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 ZBED6P86452 979 aa11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 TBC1D8BQ0IIM8 1120 aa11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 E2F5Q15329 346 aa11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 QRICH1Q2TAL8 776 aa11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 TUBB8Q3ZCM7 444 aa11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 STRIP1Q5VSL9 837 aa11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 CYB5D1Q6P9G0 228 aa11.16□□□□□ -0.62
LCLAT1-202ENST00000319406 MICALCLQ6ZW33 695 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms