RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 TAPT1Q6NXT6 567 aa30.77■■■□□ 2.52
CTDNEP1-201ENST00000318988 KANK3Q6NY19 840 aa30.77■■■□□ 2.52
CTDNEP1-201ENST00000318988 KRBA2Q6ZNG9 492 aa30.77■■■□□ 2.52
CTDNEP1-201ENST00000318988 SMAP1Q8IYB5 467 aaPredicted RBP30.77■■■□□ 2.52
CTDNEP1-201ENST00000318988 NEK9Q8TD19 979 aa30.77■■■□□ 2.52
CTDNEP1-201ENST00000318988 ANP32EQ9BTT0 268 aa30.77■■■□□ 2.52
CTDNEP1-201ENST00000318988 POLR3CQ9BUI4 534 aaPredicted RBP30.77■■■□□ 2.52
CTDNEP1-201ENST00000318988 TNMDQ9H2S6 317 aa30.77■■■□□ 2.52
CTDNEP1-201ENST00000318988 TMEM63CQ9P1W3 806 aa30.77■■■□□ 2.52
CTDNEP1-201ENST00000318988 SRRDQ9UH36 339 aa30.77■■■□□ 2.52
CTDNEP1-201ENST00000318988 SERTAD1Q9UHV2 236 aa30.77■■■□□ 2.52
CTDNEP1-201ENST00000318988 DOCK3Q8IZD9 2030 aa30.76■■■□□ 2.52
CTDNEP1-201ENST00000318988 SORBS3O60504 671 aa30.76■■■□□ 2.51
CTDNEP1-201ENST00000318988 GGPS1O95749 300 aa30.76■■■□□ 2.51
CTDNEP1-201ENST00000318988 PLCG1P19174 1290 aa30.76■■■□□ 2.51
CTDNEP1-201ENST00000318988 CYP2C19P33261 490 aa30.76■■■□□ 2.51
CTDNEP1-201ENST00000318988 SP4Q02446 784 aa30.76■■■□□ 2.51
CTDNEP1-201ENST00000318988 MFSD14CQ5VZR4 134 aa30.76■■■□□ 2.51
CTDNEP1-201ENST00000318988 TUFT1Q9NNX1 390 aa30.76■■■□□ 2.51
CTDNEP1-201ENST00000318988 RBM47A0AV96 593 aaKnown RBP30.75■■■□□ 2.51
CTDNEP1-201ENST00000318988 SLFN14P0C7P3 912 aa30.75■■■□□ 2.51
CTDNEP1-201ENST00000318988 IRF5Q13568 498 aa30.75■■■□□ 2.51
CTDNEP1-201ENST00000318988 CAMK4Q16566 473 aa30.75■■■□□ 2.51
CTDNEP1-201ENST00000318988 CCDC62Q6P9F0 684 aa30.75■■■□□ 2.51
CTDNEP1-201ENST00000318988 DHX37Q8IY37 1157 aaKnown RBP30.75■■■□□ 2.51
CTDNEP1-201ENST00000318988 KATNBL1Q9H079 304 aa30.75■■■□□ 2.51
CTDNEP1-201ENST00000318988 CUEDC2Q9H467 287 aa30.75■■■□□ 2.51
CTDNEP1-201ENST00000318988 TSKSQ9UJT2 592 aa30.75■■■□□ 2.51
CTDNEP1-201ENST00000318988 KIAA1217Q5T5P2 1943 aa30.75■■■□□ 2.51
CTDNEP1-201ENST00000318988 CTAGE5O15320 804 aa30.74■■■□□ 2.51
CTDNEP1-201ENST00000318988 ARIH2O95376 493 aa30.74■■■□□ 2.51
CTDNEP1-201ENST00000318988 CYP4A11Q02928 519 aa30.74■■■□□ 2.51
CTDNEP1-201ENST00000318988 GRB10Q13322 594 aa30.74■■■□□ 2.51
CTDNEP1-201ENST00000318988 IQSEC1Q6DN90 963 aa30.74■■■□□ 2.51
CTDNEP1-201ENST00000318988 METTL7BQ6UX53 244 aa30.74■■■□□ 2.51
CTDNEP1-201ENST00000318988 DYDC2Q96IM9 177 aa30.74■■■□□ 2.51
CTDNEP1-201ENST00000318988 WBP1LQ9NX94 342 aa30.74■■■□□ 2.51
CTDNEP1-201ENST00000318988 STK17AQ9UEE5 414 aa30.74■■■□□ 2.51
CTDNEP1-201ENST00000318988 PCDHA10Q9Y5I2 948 aa30.74■■■□□ 2.51
CTDNEP1-201ENST00000318988 MCM3APO60318 1980 aa30.74■■■□□ 2.51
CTDNEP1-201ENST00000318988 MED24O75448 989 aa30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 CCNE2O96020 404 aa30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 CELF3Q5SZQ8 465 aaKnown RBP30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 HYIQ5T013 277 aa30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 MIS18BP1Q6P0N0 1132 aa30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 CATSPER3Q86XQ3 398 aa30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 TPH2Q8IWU9 490 aa30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 GZF1Q9H116 711 aaPredicted RBP30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 RGL1Q9NZL6 768 aa30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 KIAA1024Q9UPX6 916 aa30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 POTEB3A0JP26 581 aa30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 ACTN4O43707 911 aaKnown RBP30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 FARP2O94887 1054 aaPredicted RBP30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 LETM1O95202 739 aaPredicted RBP30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 P4HBP07237 508 aaKnown RBP30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 PSAPP07602 524 aa30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 ADCYAP1R1P41586 468 aa30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 ACTR2P61160 394 aa30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 E2F4Q16254 413 aa30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 TMEM119Q4V9L6 283 aa30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 POTEBQ6S5H4 581 aa30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 DNAJC5GQ8N7S2 189 aa30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 PNMA5Q96PV4 448 aa30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 HSD17B14Q9BPX1 270 aa30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 BCAS3Q9H6U6 928 aa30.73■■■□□ 2.51
CTDNEP1-201ENST00000318988 ZSWIM8A7E2V4 1837 aa30.72■■■□□ 2.51
CTDNEP1-201ENST00000318988 NOP56O00567 594 aaKnown RBP30.72■■■□□ 2.51
CTDNEP1-201ENST00000318988 MUTP22033 750 aa30.72■■■□□ 2.51
CTDNEP1-201ENST00000318988 CAP1Q01518 475 aa30.72■■■□□ 2.51
CTDNEP1-201ENST00000318988 CTTNQ14247 550 aaKnown RBP30.72■■■□□ 2.51
CTDNEP1-201ENST00000318988 CCDC144BQ3MJ40 725 aa30.72■■■□□ 2.51
CTDNEP1-201ENST00000318988 PRAMEF19Q5SWL8 479 aa30.72■■■□□ 2.51
CTDNEP1-201ENST00000318988 KCTD17Q8N5Z5 321 aa30.72■■■□□ 2.51
CTDNEP1-201ENST00000318988 RAET1EQ8TD07 263 aa30.72■■■□□ 2.51
CTDNEP1-201ENST00000318988 MAGEF1Q9HAY2 307 aa30.72■■■□□ 2.51
CTDNEP1-201ENST00000318988 NKRFO15226 690 aaKnown RBP eCLIP30.71■■■□□ 2.51
CTDNEP1-201ENST00000318988 GH1P01241 217 aa30.71■■■□□ 2.51
CTDNEP1-201ENST00000318988 SPATA31C1P0DKV0 1188 aa30.71■■■□□ 2.51
CTDNEP1-201ENST00000318988 NRBP1Q9UHY1 535 aa30.71■■■□□ 2.51
CTDNEP1-201ENST00000318988 DNM3Q9UQ16 869 aa30.71■■■□□ 2.51
CTDNEP1-201ENST00000318988 POTEFA5A3E0 1075 aa30.7■■■□□ 2.51
CTDNEP1-201ENST00000318988 SLITRK3O94933 977 aa30.7■■■□□ 2.51
CTDNEP1-201ENST00000318988 PRMT2P55345 433 aa30.7■■■□□ 2.51
CTDNEP1-201ENST00000318988 LAMC2Q13753 1193 aa30.7■■■□□ 2.51
CTDNEP1-201ENST00000318988 POTEGQ6S5H5 508 aa30.7■■■□□ 2.51
CTDNEP1-201ENST00000318988 BANK1Q8NDB2 785 aa30.7■■■□□ 2.51
CTDNEP1-201ENST00000318988 TRIB2Q92519 343 aa30.7■■■□□ 2.51
CTDNEP1-201ENST00000318988 SPATA33Q96N06 139 aa30.7■■■□□ 2.51
CTDNEP1-201ENST00000318988 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP30.69■■■□□ 2.5
CTDNEP1-201ENST00000318988 DKC1O60832 514 aaKnown RBP eCLIP30.69■■■□□ 2.5
CTDNEP1-201ENST00000318988 QARSP47897 775 aaKnown RBP30.69■■■□□ 2.5
CTDNEP1-201ENST00000318988 TNFAIP2Q03169 654 aa30.69■■■□□ 2.5
CTDNEP1-201ENST00000318988 ECM1Q16610 540 aa30.69■■■□□ 2.5
CTDNEP1-201ENST00000318988 PDXDC2PQ6P474 469 aa30.69■■■□□ 2.5
CTDNEP1-201ENST00000318988 ELOA2Q8IYF1 753 aaPredicted RBP30.69■■■□□ 2.5
CTDNEP1-201ENST00000318988 LXNQ9BS40 222 aa30.69■■■□□ 2.5
CTDNEP1-201ENST00000318988 ZSWIM4Q9H7M6 989 aa30.69■■■□□ 2.5
CTDNEP1-201ENST00000318988 BACH1O14867 736 aa30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 SUPT20HL2P0C7V6 817 aa30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 ZNF865P0CJ78 1059 aaPredicted RBP30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms