RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 PSMC6P62333 389 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 CALCRLQ16602 461 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 MAN2A1Q16706 1144 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 ARL6IP4Q66PJ3 421 aaKnown RBP10.56□□□□□ -0.72
RPGR-201ENST00000318842 KDM7AQ6ZMT4 941 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 ZSCAN29Q8IWY8 852 aaPredicted RBP10.56□□□□□ -0.72
RPGR-201ENST00000318842 METTL13Q8N6R0 699 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 FAM84AQ96KN4 292 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 CRNKL1Q9BZJ0 848 aaKnown RBP10.56□□□□□ -0.72
RPGR-201ENST00000318842 ERVK-5Q9HDB9 667 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 BARHL2Q9NY43 387 aa10.56□□□□□ -0.72
RPGR-201ENST00000318842 TOGARAM1Q9Y4F4 1720 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 TNS2Q63HR2 1409 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 RSPH10B2B2RC85 870 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 RSPH10BP0C881 870 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 SKOR1P84550 965 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 CYP4A11Q02928 519 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 PLS1Q14651 629 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 NONOQ15233 471 aaKnown RBP eCLIP10.55□□□□□ -0.72
RPGR-201ENST00000318842 CENPPQ6IPU0 288 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 CCDC121Q6ZUS5 278 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 TBC1D1Q86TI0 1168 aaPredicted RBP10.55□□□□□ -0.72
RPGR-201ENST00000318842 PALB2Q86YC2 1186 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 RBM46Q8TBY0 533 aaKnown RBP10.55□□□□□ -0.72
RPGR-201ENST00000318842 STAMBPL1Q96FJ0 436 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 CARD10Q9BWT7 1032 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 ACP6Q9NPH0 428 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 NOC2LQ9Y3T9 749 aaKnown RBP10.55□□□□□ -0.72
RPGR-201ENST00000318842 IGSF9BQ9UPX0 1349 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 BICDL2A1A5D9 508 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 POTEFA5A3E0 1075 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 USP17L15C9J2P7 530 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 USP17L13C9JLJ4 530 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 USP17L11C9JVI0 530 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 USP17L18D6R9N7 530 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 USP17L22D6RA61 530 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 USP17L17D6RBQ6 530 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 USP17L19D6RCP7 530 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 USP17L20D6RJB6 530 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 GCOM1H8Y6P7 765 aaPredicted RBP10.55□□□□□ -0.72
RPGR-201ENST00000318842 KRIT1O00522 736 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 ZBTB39O15060 712 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 CALCAP01258 141 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 MYZAPP0CAP1 466 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 POTEIP0CG38 1075 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 USP17L24Q0WX57 530 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 COASYQ13057 564 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 HIBCHQ6NVY1 386 aaPredicted RBP10.55□□□□□ -0.72
RPGR-201ENST00000318842 CYB5D1Q6P9G0 228 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 USP17L6PQ6QN14 398 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 POTEGQ6S5H5 508 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 POTEEQ6S8J3 1075 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 PHLDB2Q86SQ0 1253 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 USP38Q8NB14 1042 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 GIMAP7Q8NHV1 300 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 CEP95Q96GE4 821 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 SEC16BQ96JE7 1060 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 RPGRIP1Q96KN7 1286 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 POP1Q99575 1024 aaKnown RBP10.55□□□□□ -0.72
RPGR-201ENST00000318842 BRIP1Q9BX63 1249 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 KIAA1024Q9UPX6 916 aa10.55□□□□□ -0.72
RPGR-201ENST00000318842 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.55□□□□□ -0.72
RPGR-201ENST00000318842 TUBBP07437 444 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 CALM1P0DP23 149 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 CALM2P0DP24 149 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 CALM3P0DP25 149 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 CALML3P27482 149 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 KIF5BP33176 963 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 NFIXQ14938 502 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 PPP2R5AQ15172 486 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 HERC4Q5GLZ8 1057 aaPredicted RBP10.54□□□□□ -0.72
RPGR-201ENST00000318842 CPLX4Q7Z7G2 160 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 NEK8Q86SG6 692 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 TAX1BP1Q86VP1 789 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 RDH13Q8NBN7 331 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 KCNV2Q8TDN2 545 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 CAVIN3Q969G5 261 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 NUP58Q9BVL2 599 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 TSGA10Q9BZW7 698 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 CCSER1Q9C0I3 900 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 VCPKMTQ9H867 229 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 TAS2R14Q9NYV8 317 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 ODF2LQ9ULJ1 636 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 PTPN22Q9Y2R2 807 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 ATMINO43313 823 aaPredicted RBP10.54□□□□□ -0.72
RPGR-201ENST00000318842 GFPT2O94808 682 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 FGFR4P22455 802 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 RFC4P35249 363 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 EPS15P42566 896 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 MARCKSL1P49006 195 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 RNASELQ05823 741 aaKnown RBP10.54□□□□□ -0.72
RPGR-201ENST00000318842 PPP1R7Q15435 360 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 ZKSCAN8Q15776 578 aaPredicted RBP10.54□□□□□ -0.72
RPGR-201ENST00000318842 SLC9C1Q4G0N8 1177 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 ALS2CLQ60I27 953 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 CNNM4Q6P4Q7 775 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 CCDC25Q86WR0 208 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 ZNF444Q8N0Y2 327 aaPredicted RBP10.54□□□□□ -0.72
RPGR-201ENST00000318842 CALML4Q96GE6 196 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 PWWP2AQ96N64 755 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms