RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 PRR23CQ6ZRP0 262 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 KRT27Q7Z3Y8 459 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 FANCLQ9NW38 375 aa4.88□□□□□ -1.63
CNOT1-201ENST00000317147 ARHGAP42A6NI28 874 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 LGALS16A8MUM7 142 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 ANKRD65E5RJM6 399 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 DKC1O60832 514 aaKnown RBP eCLIP4.87□□□□□ -1.631e-323■■■■■ 27.4
CNOT1-201ENST00000317147 SERPING1P05155 500 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 KRT16P08779 473 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 KIF11P52732 1056 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 ZC3H6P61129 1189 aaKnown RBP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 USH1GQ495M9 461 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 TTC38Q5R3I4 469 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 TRIM68Q6AZZ1 485 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 UNC13DQ70J99 1090 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 C2CD5Q86YS7 1000 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 NBPF15Q8N660 670 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 HELBQ8NG08 1087 aaPredicted RBP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 MIEF2Q96C03 454 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 SLF1Q9BQI6 1058 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 MAP3K2Q9Y2U5 619 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 ADGRG1Q9Y653 693 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 CCT8L1PA6NM43 557 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 SPAG6O75602 509 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 GPTP24298 496 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 RESTQ13127 1097 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 CCDC105Q8IYK2 499 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 SLC35F6Q8N357 371 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 HAUS7Q99871 368 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 ARHGAP26Q9UNA1 814 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 COMMD3-BMI1R4GMX3 469 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 HNRNPH1P31943 449 aaKnown RBP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 VHLP40337 213 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 GYS2P54840 703 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 FSCBQ5H9T9 825 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 KRT40Q6A162 431 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 THEMISQ8N1K5 641 aaPredicted RBP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 PITPNM2Q9BZ72 1349 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 SMIM31A0A1B0GVY4 71 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 NVLO15381 856 aaKnown RBP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 ATP2C2O75185 946 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 IDH1O75874 414 aaKnown RBP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 PARP1P09874 1014 aaKnown RBP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 FKBP3Q00688 224 aaKnown RBP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 KCNB1Q14721 858 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 ARHGAP22Q7Z5H3 698 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 SETD3Q86TU7 594 aaPredicted RBP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 ZC3H18Q86VM9 953 aaKnown RBP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 CTAGE3PQ8IX95 158 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 IRAK4Q9NWZ3 460 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 BLOC1S6Q9UL45 172 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 USP15Q9Y4E8 981 aaPredicted RBP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 SRPRBQ9Y5M8 271 aaKnown RBP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 ADKP55263 362 aaKnown RBP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 GSCP56915 257 aaPredicted RBP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 MDM2Q00987 491 aaPredicted RBP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 OCA2Q04671 838 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 AOC3Q16853 763 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 FIGNQ5HY92 759 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 CD302Q8IX05 232 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 DHX40Q8IX18 779 aaKnown RBP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 MREGQ8N565 214 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 CCDC85AQ96PX6 553 aaPredicted RBP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 XPO6Q96QU8 1125 aaKnown RBP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 USP44Q9H0E7 712 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 PLEKHA4Q9H4M7 779 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 IFT122Q9HBG6 1241 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 ASIC3Q9UHC3 531 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 MAP2K7O14733 419 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 SPOPO43791 374 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 CDH16O75309 829 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 RGS2P41220 211 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 NDUFA8P51970 172 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 CYB5D1Q6P9G0 228 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 NEK10Q6ZWH5 1172 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 COPRSQ9NQ92 184 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 DDX21Q9NR30 783 aaKnown RBP eCLIP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 GID8Q9NWU2 228 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 SLC4A7Q9Y6M7 1214 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 PCDH11YQ9BZA8 1340 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 TRIM66O15016 1216 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 AFMP43652 599 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 PTH1RQ03431 593 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 DPCR1Q3MIW9 517 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 TCERG1LQ5VWI1 586 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 USHBP1Q8N6Y0 703 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 ICA1LQ8NDH6 482 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 TNIP2Q8NFZ5 429 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 NR1H4Q96RI1 486 aaPredicted RBP4.87□□□□□ -1.63
CNOT1-201ENST00000317147 DESI2Q9BSY9 194 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 L1RE1Q9UN81 338 aa4.87□□□□□ -1.63
CNOT1-201ENST00000317147 H2AFZP0C0S5 128 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 ACTN1P12814 892 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 NEK2P51955 445 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 POLA2Q14181 598 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 H2AFVQ71UI9 128 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 TRPM8Q7Z2W7 1104 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 KLHL23Q8NBE8 558 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 CYFIP2Q96F07 1278 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 NUDCD1Q96RS6 583 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms