RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 ETNPPLQ8TBG4 499 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 GMCL1Q96IK5 515 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 NOX5Q96PH1 765 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 TANGO6Q9C0B7 1094 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 TMX4Q9H1E5 349 aaPredicted RBP21.55■■□□□ 1.04
AP3S1-201ENST00000316788 VPS18Q9P253 973 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 PI4KBQ9UBF8 816 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 E9PMD0 336 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 RPS6KA5O75582 802 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 MOCS3O95396 460 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 EEF2P13639 858 aaKnown RBP21.55■■□□□ 1.04
AP3S1-201ENST00000316788 SLC1A4P43007 532 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 SCNN1DP51172 638 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 SPIRE1Q08AE8 756 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 NFIAQ12857 509 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 FAM83BQ5T0W9 1011 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 TMEM179Q6ZVK1 233 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 GOLGA5Q8TBA6 731 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 SCFD1Q8WVM8 642 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 OSBPL9Q96SU4 736 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 MLXIPQ9HAP2 919 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 EMILIN3Q9NT22 766 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 AIPL1Q9NZN9 384 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 HPCAL4Q9UM19 191 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.55■■□□□ 1.04
AP3S1-201ENST00000316788 MYH4Q9Y623 1939 aa21.55■■□□□ 1.04
AP3S1-201ENST00000316788 ATP8B3O60423 1300 aa21.54■■□□□ 1.04
AP3S1-201ENST00000316788 SIPA1L1O43166 1804 aa21.54■■□□□ 1.04
AP3S1-201ENST00000316788 POTEB3A0JP26 581 aa21.54■■□□□ 1.04
AP3S1-201ENST00000316788 POTECB2RU33 542 aa21.54■■□□□ 1.04
AP3S1-201ENST00000316788 MEIS2O14770 477 aa21.54■■□□□ 1.04
AP3S1-201ENST00000316788 ZNF185O15231 689 aa21.54■■□□□ 1.04
AP3S1-201ENST00000316788 TNFRSF8P28908 595 aa21.54■■□□□ 1.04
AP3S1-201ENST00000316788 ATP2B2Q01814 1243 aa21.54■■□□□ 1.04
AP3S1-201ENST00000316788 CERKLQ49MI3 558 aaPredicted RBP21.54■■□□□ 1.04
AP3S1-201ENST00000316788 POTEBQ6S5H4 581 aa21.54■■□□□ 1.04
AP3S1-201ENST00000316788 FAM20AQ96MK3 541 aa21.54■■□□□ 1.04
AP3S1-201ENST00000316788 AMNQ9BXJ7 453 aa21.54■■□□□ 1.04
AP3S1-201ENST00000316788 TRAF3IP3Q9Y228 551 aa21.54■■□□□ 1.04
AP3S1-201ENST00000316788 ARFGEF1Q9Y6D6 1849 aa21.54■■□□□ 1.04
AP3S1-201ENST00000316788 COL2A1P02458 1487 aaPredicted RBP21.54■■□□□ 1.04
AP3S1-201ENST00000316788 MYH7BA7E2Y1 1941 aa21.54■■□□□ 1.04
AP3S1-201ENST00000316788 USP17L15C9J2P7 530 aa21.53■■□□□ 1.04
AP3S1-201ENST00000316788 USP17L13C9JLJ4 530 aa21.53■■□□□ 1.04
AP3S1-201ENST00000316788 USP17L11C9JVI0 530 aa21.53■■□□□ 1.04
AP3S1-201ENST00000316788 USP17L18D6R9N7 530 aa21.53■■□□□ 1.04
AP3S1-201ENST00000316788 USP17L22D6RA61 530 aa21.53■■□□□ 1.04
AP3S1-201ENST00000316788 USP17L17D6RBQ6 530 aa21.53■■□□□ 1.04
AP3S1-201ENST00000316788 USP17L19D6RCP7 530 aa21.53■■□□□ 1.04
AP3S1-201ENST00000316788 USP17L20D6RJB6 530 aa21.53■■□□□ 1.04
AP3S1-201ENST00000316788 CETN3O15182 167 aa21.53■■□□□ 1.04
AP3S1-201ENST00000316788 CIITAP33076 1130 aa21.53■■□□□ 1.04
AP3S1-201ENST00000316788 SREBF1P36956 1147 aa21.53■■□□□ 1.04
AP3S1-201ENST00000316788 HNRNPH2P55795 449 aaKnown RBP21.53■■□□□ 1.04
AP3S1-201ENST00000316788 ARHGAP4P98171 946 aa21.53■■□□□ 1.04
AP3S1-201ENST00000316788 USP17L24Q0WX57 530 aa21.53■■□□□ 1.04
AP3S1-201ENST00000316788 DOK7Q18PE1 504 aa21.53■■□□□ 1.04
AP3S1-201ENST00000316788 HERC4Q5GLZ8 1057 aaPredicted RBP21.53■■□□□ 1.04
AP3S1-201ENST00000316788 USP17L6PQ6QN14 398 aa21.53■■□□□ 1.04
AP3S1-201ENST00000316788 MXD3Q9BW11 206 aa21.53■■□□□ 1.04
AP3S1-201ENST00000316788 LSM14BQ9BX40 385 aaKnown RBP21.53■■□□□ 1.04
AP3S1-201ENST00000316788 FAN1Q9Y2M0 1017 aa21.53■■□□□ 1.04
AP3S1-201ENST00000316788 ZC3H4Q9UPT8 1303 aaKnown RBP21.53■■□□□ 1.04
AP3S1-201ENST00000316788 ATAD5Q96QE3 1844 aa21.53■■□□□ 1.04
AP3S1-201ENST00000316788 ADAMTSL1Q8N6G6 1762 aa21.52■■□□□ 1.04
AP3S1-201ENST00000316788 BTNL10A8MVZ5 291 aa21.52■■□□□ 1.04
AP3S1-201ENST00000316788 MED24O75448 989 aa21.52■■□□□ 1.04
AP3S1-201ENST00000316788 CLSTN1O94985 981 aa21.52■■□□□ 1.04
AP3S1-201ENST00000316788 SSBP05455 408 aaKnown RBP eCLIP21.52■■□□□ 1.04
AP3S1-201ENST00000316788 RPA1P27694 616 aa21.52■■□□□ 1.04
AP3S1-201ENST00000316788 GLE1Q53GS7 698 aaKnown RBP21.52■■□□□ 1.04
AP3S1-201ENST00000316788 STRIP1Q5VSL9 837 aa21.52■■□□□ 1.04
AP3S1-201ENST00000316788 FRMD5Q7Z6J6 570 aa21.52■■□□□ 1.04
AP3S1-201ENST00000316788 SYT2Q8N9I0 419 aaPredicted RBP21.52■■□□□ 1.04
AP3S1-201ENST00000316788 SPATA4Q8NEY3 305 aa21.52■■□□□ 1.04
AP3S1-201ENST00000316788 SMCR8Q8TEV9 937 aaPredicted RBP21.52■■□□□ 1.04
AP3S1-201ENST00000316788 AENQ8WTP8 325 aaKnown RBP21.52■■□□□ 1.04
AP3S1-201ENST00000316788 CCDC102AQ96A19 550 aa21.52■■□□□ 1.04
AP3S1-201ENST00000316788 PLCB1Q9NQ66 1216 aa21.52■■□□□ 1.04
AP3S1-201ENST00000316788 G3V3G9 751 aa21.52■■□□□ 1.03
AP3S1-201ENST00000316788 TLR2O60603 784 aa21.52■■□□□ 1.03
AP3S1-201ENST00000316788 ANXA13P27216 316 aa21.52■■□□□ 1.03
AP3S1-201ENST00000316788 BMT2Q1RMZ1 405 aa21.52■■□□□ 1.03
AP3S1-201ENST00000316788 ARSHQ5FYA8 562 aa21.52■■□□□ 1.03
AP3S1-201ENST00000316788 C10orf76Q5T2E6 689 aa21.52■■□□□ 1.03
AP3S1-201ENST00000316788 DCAF8Q5TAQ9 597 aa21.52■■□□□ 1.03
AP3S1-201ENST00000316788 BTNL9Q6UXG8 535 aa21.52■■□□□ 1.03
AP3S1-201ENST00000316788 EPM2AIP1Q7L775 607 aaPredicted RBP21.52■■□□□ 1.03
AP3S1-201ENST00000316788 GANQ9H2C0 597 aa21.52■■□□□ 1.03
AP3S1-201ENST00000316788 NFKBIEO00221 500 aa21.51■■□□□ 1.03
AP3S1-201ENST00000316788 N4BP1O75113 896 aaKnown RBP21.51■■□□□ 1.03
AP3S1-201ENST00000316788 ACTN2P35609 894 aa21.51■■□□□ 1.03
AP3S1-201ENST00000316788 PAFAH1B1P43034 410 aa21.51■■□□□ 1.03
AP3S1-201ENST00000316788 LMAN1P49257 510 aa21.51■■□□□ 1.03
AP3S1-201ENST00000316788 RASSF7Q02833 373 aa21.51■■□□□ 1.03
AP3S1-201ENST00000316788 C2orf54Q08AI8 447 aa21.51■■□□□ 1.03
AP3S1-201ENST00000316788 NAB2Q15742 525 aa21.51■■□□□ 1.03
AP3S1-201ENST00000316788 SLC18A3Q16572 532 aa21.51■■□□□ 1.03
AP3S1-201ENST00000316788 TDRD12Q587J7 1177 aaKnown RBP21.51■■□□□ 1.03
AP3S1-201ENST00000316788 FGFBP2Q9BYJ0 223 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms