RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 LXNQ9BS40 222 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 CRACR2AQ9BSW2 395 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 A1CFQ9NQ94 594 aaKnown RBP7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 AGPAT5Q9NUQ2 364 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 SPTLC3Q9NUV7 552 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 DACH1Q9UI36 760 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 COL11A1P12107 1806 aaPredicted RBP7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 FOSP01100 380 aaPredicted RBP7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 CYP2C8P10632 490 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 NPEPPSP55786 919 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 SP2Q02086 613 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 SEMA3FQ13275 785 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 KCNB1Q14721 858 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 Q3C1V9 767 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 UNC13DQ70J99 1090 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 ELMO3Q96BJ8 720 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 CNOT6LQ96LI5 555 aaKnown RBP7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 RAB34Q9BZG1 259 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 CTDP1Q9Y5B0 961 aaPredicted RBP7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 PSMA7O14818 248 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 CLIC2O15247 247 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 CYP3A4P08684 503 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 RPA1P27694 616 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 PBX1P40424 430 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 MIIPQ5JXC2 388 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 LRRN4CLQ8ND94 238 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 SMCR8Q8TEV9 937 aaPredicted RBP7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 CCDC34Q96HJ3 373 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 MXRA8Q9BRK3 442 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 KIFC3Q9BVG8 833 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 RMND1Q9NWS8 449 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 MTMR1Q13613 665 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 RAD9BQ6WBX8 426 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 CATSPERGQ6ZRH7 1159 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 SLFN12Q8IYM2 578 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 SLC5A5Q92911 643 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 CHP1Q99653 195 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 ARID3AQ99856 593 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 PDCD2LQ9BRP1 358 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.78□□□□□ -1.162e-7■■■■■ 29.5
LYSMD3-201ENST00000315948 RLFQ13129 1914 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 DSG3P32926 999 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 FAM26FQ5R3K3 315 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 ARHGEF16Q5VV41 709 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 CCAR2Q8N163 923 aaKnown RBP7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 TUBGCP2Q9BSJ2 902 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 PXMP2Q9NR77 195 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 STK17AQ9UEE5 414 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 CLEC11AQ9Y240 323 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 V9GYY5 206 aaPredicted RBP7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 ZBED4O75132 1171 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 RINT1Q6NUQ1 792 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 DNAAF5Q86Y56 855 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 PPP1R13LQ8WUF5 828 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 ZBTB10Q96DT7 871 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 DNM3Q9UQ16 869 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 TTC26A0AVF1 554 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 PLEKP08567 350 aaPredicted RBP7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 CCNE1P24864 410 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 CASP4P49662 377 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 MAP3K9P80192 1104 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 WDR78Q5VTH9 848 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 LRRC55Q6ZSA7 311 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 ACRBPQ8NEB7 543 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 PPP1R13BQ96KQ4 1090 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 FAM207AQ9NSI2 230 aaPredicted RBP7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 RABGAP1Q9Y3P9 1069 aa7.78□□□□□ -1.16
LYSMD3-201ENST00000315948 DOCK5Q9H7D0 1870 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 LRRN2O75325 713 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 TNNT1P13805 278 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 ERVK-24P63145 666 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 HYIQ5T013 277 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 MRPL44Q9H9J2 332 aaKnown RBP7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 AGO4Q9HCK5 861 aaKnown RBP7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 CYP39A1Q9NYL5 469 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 TRIM10Q9UDY6 481 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 PLA2G6O60733 806 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 NR3C2P08235 984 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 RBM10P98175 930 aaKnown RBP7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 AMPD3Q01432 767 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 SYCP1Q15431 976 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 SUPT20HL1Q3ZLR7 823 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 CENPPQ6IPU0 288 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 CNNM4Q6P4Q7 775 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 DAW1Q8N136 415 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 OPTNQ96CV9 577 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 FAM20AQ96MK3 541 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 CUEDC2Q9H467 287 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 LIMA1Q9UHB6 759 aaKnown RBP7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 SYNPO2Q9UMS6 1093 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 RPTORQ8N122 1335 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 PAPPA2Q9BXP8 1791 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 MTIF2P46199 727 aaKnown RBP7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 SEPT14Q6ZU15 432 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 NCAPG2Q86XI2 1143 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 SYT2Q8N9I0 419 aaPredicted RBP7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 ZNF507Q8TCN5 953 aa7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 NOC3LQ8WTT2 800 aaKnown RBP7.77□□□□□ -1.17
LYSMD3-201ENST00000315948 BAG1Q99933 345 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms