RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 UBE2SQ16763 222 aa22.6■■□□□ 1.21
KDM3B-201ENST00000314358 BBS5Q8N3I7 341 aa22.6■■□□□ 1.21
KDM3B-201ENST00000314358 HEXIM2Q96MH2 286 aaKnown RBP22.6■■□□□ 1.21
KDM3B-201ENST00000314358 ZSWIM6Q9HCJ5 1215 aa22.6■■□□□ 1.21
KDM3B-201ENST00000314358 CFAP74Q9C0B2 1584 aa22.6■■□□□ 1.21
KDM3B-201ENST00000314358 KCNA1Q09470 495 aa22.6■■□□□ 1.21
KDM3B-201ENST00000314358 LMCD1Q9NZU5 365 aa22.6■■□□□ 1.21
KDM3B-201ENST00000314358 SCOCQ9UIL1 159 aa22.6■■□□□ 1.21
KDM3B-201ENST00000314358 SFI1A8K8P3 1242 aa22.59■■□□□ 1.21
KDM3B-201ENST00000314358 GOLGA8MH3BSY2 632 aa22.59■■□□□ 1.21
KDM3B-201ENST00000314358 RBM6P78332 1123 aaKnown RBP22.59■■□□□ 1.21
KDM3B-201ENST00000314358 METTL23Q86XA0 190 aa22.59■■□□□ 1.21
KDM3B-201ENST00000314358 TRAIPQ9BWF2 469 aa22.59■■□□□ 1.21
KDM3B-201ENST00000314358 MAN1B1Q9UKM7 699 aa22.59■■□□□ 1.21
KDM3B-201ENST00000314358 PTPRTO14522 1441 aa22.59■■□□□ 1.21
KDM3B-201ENST00000314358 PMLP29590 882 aa22.59■■□□□ 1.21
KDM3B-201ENST00000314358 ARL4AP40617 200 aa22.59■■□□□ 1.21
KDM3B-201ENST00000314358 TBC1D1Q86TI0 1168 aaPredicted RBP22.59■■□□□ 1.21
KDM3B-201ENST00000314358 MRFAP1L1Q96HT8 127 aa22.59■■□□□ 1.21
KDM3B-201ENST00000314358 EPHB4P54760 987 aa22.59■■□□□ 1.21
KDM3B-201ENST00000314358 NR1H4Q96RI1 486 aaPredicted RBP22.59■■□□□ 1.21
KDM3B-201ENST00000314358 SPZ1Q9BXG8 430 aa22.59■■□□□ 1.21
KDM3B-201ENST00000314358 ESRRAP11474 423 aaPredicted RBP22.59■■□□□ 1.21
KDM3B-201ENST00000314358 CEP170P1Q96L14 293 aa22.59■■□□□ 1.21
KDM3B-201ENST00000314358 GREM2Q9H772 168 aa22.59■■□□□ 1.21
KDM3B-201ENST00000314358 NHEJ1Q9H9Q4 299 aaPredicted RBP22.59■■□□□ 1.21
KDM3B-201ENST00000314358 SRGAP2CP0DJJ0 459 aa22.58■■□□□ 1.21
KDM3B-201ENST00000314358 AOC3Q16853 763 aa22.58■■□□□ 1.21
KDM3B-201ENST00000314358 KIAA1841Q6NSI8 718 aa22.58■■□□□ 1.21
KDM3B-201ENST00000314358 DRC3Q9H069 523 aa22.58■■□□□ 1.21
KDM3B-201ENST00000314358 CYP27A1Q02318 531 aa22.58■■□□□ 1.21
KDM3B-201ENST00000314358 LMNB2Q03252 620 aa22.58■■□□□ 1.21
KDM3B-201ENST00000314358 TFDP1Q14186 410 aa22.58■■□□□ 1.21
KDM3B-201ENST00000314358 A0A0G2JND7 137 aa22.58■■□□□ 1.21
KDM3B-201ENST00000314358 EIF4A3P38919 411 aaKnown RBP22.58■■□□□ 1.21
KDM3B-201ENST00000314358 FBXW4P57775 412 aa22.58■■□□□ 1.21
KDM3B-201ENST00000314358 CAPRIN1Q14444 709 aaKnown RBP22.58■■□□□ 1.21
KDM3B-201ENST00000314358 HIBCHQ6NVY1 386 aaPredicted RBP22.58■■□□□ 1.21
KDM3B-201ENST00000314358 TTC17Q96AE7 1141 aa22.58■■□□□ 1.21
KDM3B-201ENST00000314358 ZMAT2Q96NC0 199 aaKnown RBP22.58■■□□□ 1.21
KDM3B-201ENST00000314358 SLC13A4Q9UKG4 626 aa22.58■■□□□ 1.21
KDM3B-201ENST00000314358 KCNV2Q8TDN2 545 aa22.58■■□□□ 1.2
KDM3B-201ENST00000314358 P2RX5Q93086 422 aa22.58■■□□□ 1.2
KDM3B-201ENST00000314358 MLXIPLQ9NP71 852 aa22.58■■□□□ 1.2
KDM3B-201ENST00000314358 PGRMC1O00264 195 aaKnown RBP22.58■■□□□ 1.2
KDM3B-201ENST00000314358 RUNDC3BQ96NL0 473 aa22.58■■□□□ 1.2
KDM3B-201ENST00000314358 HADHAP40939 763 aa22.57■■□□□ 1.2
KDM3B-201ENST00000314358 ATG16L1Q676U5 607 aa22.57■■□□□ 1.2
KDM3B-201ENST00000314358 TBCKQ8TEA7 893 aa22.57■■□□□ 1.2
KDM3B-201ENST00000314358 POLIQ9UNA4 740 aa22.57■■□□□ 1.2
KDM3B-201ENST00000314358 ZNF394Q53GI3 561 aa22.57■■□□□ 1.2
KDM3B-201ENST00000314358 TRIML2Q8N7C3 387 aa22.57■■□□□ 1.2
KDM3B-201ENST00000314358 NR5A1Q13285 461 aa22.57■■□□□ 1.2
KDM3B-201ENST00000314358 TRIML1Q8N9V2 468 aa22.57■■□□□ 1.2
KDM3B-201ENST00000314358 PIGSQ96S52 555 aa22.57■■□□□ 1.2
KDM3B-201ENST00000314358 LRRC4Q9HBW1 653 aa22.57■■□□□ 1.2
KDM3B-201ENST00000314358 GUCY2CP25092 1073 aa22.57■■□□□ 1.2
KDM3B-201ENST00000314358 GLE1Q53GS7 698 aaKnown RBP22.57■■□□□ 1.2
KDM3B-201ENST00000314358 RFX8Q6ZV50 586 aa22.57■■□□□ 1.2
KDM3B-201ENST00000314358 RABGGTAQ92696 567 aa22.57■■□□□ 1.2
KDM3B-201ENST00000314358 ATP6V1E1P36543 226 aa22.56■■□□□ 1.2
KDM3B-201ENST00000314358 TNFAIP1Q13829 316 aa22.56■■□□□ 1.2
KDM3B-201ENST00000314358 KRT26Q7Z3Y9 468 aa22.56■■□□□ 1.2
KDM3B-201ENST00000314358 CCDC124Q96CT7 223 aaKnown RBP22.56■■□□□ 1.2
KDM3B-201ENST00000314358 EFHD1Q9BUP0 239 aa22.56■■□□□ 1.2
KDM3B-201ENST00000314358 ACCSQ96QU6 501 aa22.56■■□□□ 1.2
KDM3B-201ENST00000314358 ELAC2Q9BQ52 826 aaKnown RBP22.56■■□□□ 1.2
KDM3B-201ENST00000314358 ATF5Q9Y2D1 282 aaPredicted RBP22.56■■□□□ 1.2
KDM3B-201ENST00000314358 H0YCG3 227 aa22.56■■□□□ 1.2
KDM3B-201ENST00000314358 PRPSAP2O60256 369 aa22.56■■□□□ 1.2
KDM3B-201ENST00000314358 DDAH1O94760 285 aa22.56■■□□□ 1.2
KDM3B-201ENST00000314358 PCDHA4Q9UN74 947 aa22.56■■□□□ 1.2
KDM3B-201ENST00000314358 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.56■■□□□ 1.2
KDM3B-201ENST00000314358 ZBTB17Q13105 803 aa22.56■■□□□ 1.2
KDM3B-201ENST00000314358 CCDC85BQ15834 202 aaPredicted RBP22.56■■□□□ 1.2
KDM3B-201ENST00000314358 PDCD6IPQ8WUM4 868 aaKnown RBP22.56■■□□□ 1.2
KDM3B-201ENST00000314358 GOLGA8QA0A0J9YX86 632 aa22.55■■□□□ 1.2
KDM3B-201ENST00000314358 GOLGA8OA6NCC3 632 aa22.55■■□□□ 1.2
KDM3B-201ENST00000314358 GOLGA8NF8WBI6 632 aa22.55■■□□□ 1.2
KDM3B-201ENST00000314358 PHKG2P15735 406 aa22.55■■□□□ 1.2
KDM3B-201ENST00000314358 MIGA2Q7L4E1 593 aa22.55■■□□□ 1.2
KDM3B-201ENST00000314358 PARD6BQ9BYG5 372 aa22.55■■□□□ 1.2
KDM3B-201ENST00000314358 TADA3O75528 432 aa22.55■■□□□ 1.2
KDM3B-201ENST00000314358 PCDHA13Q9Y5I0 950 aa22.55■■□□□ 1.2
KDM3B-201ENST00000314358 PDHA1P08559 390 aa22.55■■□□□ 1.2
KDM3B-201ENST00000314358 HLA-DPA1P20036 260 aa22.55■■□□□ 1.2
KDM3B-201ENST00000314358 SLC7A3Q8WY07 619 aa22.55■■□□□ 1.2
KDM3B-201ENST00000314358 TM6SF1Q9BZW5 370 aa22.55■■□□□ 1.2
KDM3B-201ENST00000314358 SCINQ9Y6U3 715 aa22.55■■□□□ 1.2
KDM3B-201ENST00000314358 ESRRBO95718 433 aa22.55■■□□□ 1.2
KDM3B-201ENST00000314358 ZC3H18Q86VM9 953 aaKnown RBP22.55■■□□□ 1.2
KDM3B-201ENST00000314358 PACSIN2Q9UNF0 486 aaPredicted RBP22.55■■□□□ 1.2
KDM3B-201ENST00000314358 SOS2Q07890 1332 aaPredicted RBP22.55■■□□□ 1.2
KDM3B-201ENST00000314358 PPEF1O14829 653 aaPredicted RBP22.55■■□□□ 1.2
KDM3B-201ENST00000314358 DBNDD1Q9H9R9 158 aa22.55■■□□□ 1.2
KDM3B-201ENST00000314358 NFU1Q9UMS0 254 aa22.55■■□□□ 1.2
KDM3B-201ENST00000314358 hCG_2014768A0A024R1R8 64 aa22.54■■□□□ 1.2
KDM3B-201ENST00000314358 PRKAB2O43741 272 aa22.54■■□□□ 1.2
KDM3B-201ENST00000314358 BPIFB4P59827 614 aa22.54■■□□□ 1.2
KDM3B-201ENST00000314358 KCTD2Q14681 263 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms