RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 RNF17Q9BXT8 1623 aaKnown RBP13.34□□□□□ -0.27
EBF1-201ENST00000313708 ACEP12821 1306 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 USP42Q9H9J4 1324 aaKnown RBP13.34□□□□□ -0.27
EBF1-201ENST00000313708 CEP152O94986 1710 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 POC1B-GALNT4F8VUJ3 575 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 AGTP01019 485 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 COL9A3Q14050 684 aaPredicted RBP13.34□□□□□ -0.27
EBF1-201ENST00000313708 KPNB1Q14974 876 aaKnown RBP13.34□□□□□ -0.27
EBF1-201ENST00000313708 LRRC36Q1X8D7 754 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 ZCWPW2Q504Y3 356 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 CREG2Q8IUH2 290 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.34□□□□□ -0.27
EBF1-201ENST00000313708 TBC1D7Q9P0N9 293 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 A0A0G2JND7 137 aa13.33□□□□□ -0.27
EBF1-201ENST00000313708 ADCY3O60266 1144 aa13.33□□□□□ -0.27
EBF1-201ENST00000313708 TNFAIP3P21580 790 aa13.33□□□□□ -0.27
EBF1-201ENST00000313708 CALML3P27482 149 aa13.33□□□□□ -0.27
EBF1-201ENST00000313708 PCYT1AP49585 367 aa13.33□□□□□ -0.27
EBF1-201ENST00000313708 AKNAD1Q5T1N1 836 aa13.33□□□□□ -0.27
EBF1-201ENST00000313708 IRGCQ6NXR0 463 aa13.33□□□□□ -0.27
EBF1-201ENST00000313708 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.33□□□□□ -0.27
EBF1-201ENST00000313708 NELFCDQ8IXH7 590 aa13.33□□□□□ -0.27
EBF1-201ENST00000313708 RBBP8NLQ8NC74 664 aaPredicted RBP13.33□□□□□ -0.27
EBF1-201ENST00000313708 TRIM51Q9BSJ1 452 aa13.33□□□□□ -0.27
EBF1-201ENST00000313708 NDST4Q9H3R1 872 aa13.33□□□□□ -0.27
EBF1-201ENST00000313708 DMAP1Q9NPF5 467 aaPredicted RBP13.33□□□□□ -0.27
EBF1-201ENST00000313708 NLRP2Q9NX02 1062 aa13.33□□□□□ -0.27
EBF1-201ENST00000313708 ARPP21Q9UBL0 812 aaPredicted RBP13.33□□□□□ -0.27
EBF1-201ENST00000313708 AMOTL2Q9Y2J4 779 aa13.33□□□□□ -0.27
EBF1-201ENST00000313708 SERPING1P05155 500 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 PLEKP08567 350 aaPredicted RBP13.33□□□□□ -0.28
EBF1-201ENST00000313708 CTNNA2P26232 953 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 CABP7Q86V35 215 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 MPP4Q96JB8 637 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.33□□□□□ -0.28
EBF1-201ENST00000313708 TMOD2Q9NZR1 351 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 LZTS1Q9Y250 596 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 MARK3P27448 753 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 MLH1P40692 756 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 CLUL1Q15846 466 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 UBAP1Q9NZ09 502 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 PASKQ96RG2 1323 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 ARHGEF5Q12774 1597 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 OATP04181 439 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 TATP17735 454 aaPredicted RBP13.33□□□□□ -0.28
EBF1-201ENST00000313708 CCDC80Q76M96 950 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 ZNF570Q96NI8 536 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.33□□□□□ -0.28
EBF1-201ENST00000313708 SEC63Q9UGP8 760 aaKnown RBP13.33□□□□□ -0.28
EBF1-201ENST00000313708 DCTN4Q9UJW0 460 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 LRCH1Q9Y2L9 728 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 MED23Q9ULK4 1368 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 CAPN9O14815 690 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 IMPDH2P12268 514 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 LACTB2Q53H82 288 aaPredicted RBP13.33□□□□□ -0.28
EBF1-201ENST00000313708 CCDC110Q8TBZ0 833 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 STK32AQ8WU08 396 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 ZNF594Q96JF6 807 aaPredicted RBP13.33□□□□□ -0.28
EBF1-201ENST00000313708 RMDN2Q96LZ7 410 aa13.33□□□□□ -0.28
EBF1-201ENST00000313708 METTL5Q9NRN9 209 aaKnown RBP13.33□□□□□ -0.28
EBF1-201ENST00000313708 DISP1Q96F81 1524 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 INO80Q9ULG1 1556 aaPredicted RBP13.32□□□□□ -0.28
EBF1-201ENST00000313708 CFAP69A5D8W1 941 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 SRRM3A6NNA2 597 aaPredicted RBP13.32□□□□□ -0.28
EBF1-201ENST00000313708 KRT16P08779 473 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 CALB2P22676 271 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 MAN2A1Q16706 1144 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 SLC4A8Q2Y0W8 1093 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 USPL1Q5W0Q7 1092 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 RASSF3Q86WH2 238 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 SYT2Q8N9I0 419 aaPredicted RBP13.32□□□□□ -0.28
EBF1-201ENST00000313708 HIPK4Q8NE63 616 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 DRD4P21917 467 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 LETM2Q2VYF4 491 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 KBTBD12Q3ZCT8 623 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 LZICQ8WZA0 190 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 SCINQ9Y6U3 715 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 SHROOM2Q13796 1616 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 ETS2P15036 469 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 ADCY8P40145 1251 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 WDR60Q8WVS4 1066 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 TUBB6Q9BUF5 446 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 ZBTB3Q9H5J0 574 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 ZAP70P43403 619 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 AP2B1P63010 937 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 RIPK1Q13546 671 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 LLGL1Q15334 1064 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 P3H1Q32P28 736 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 CCT6BQ92526 530 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 TRIM33Q9UPN9 1127 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 THRAP3Q9Y2W1 955 aaKnown RBP13.32□□□□□ -0.28
EBF1-201ENST00000313708 EDC4Q6P2E9 1401 aaKnown RBP13.32□□□□□ -0.28
EBF1-201ENST00000313708 UGGT1Q9NYU2 1555 aa13.32□□□□□ -0.28
EBF1-201ENST00000313708 PPP1R3GB7ZBB8 358 aa13.31□□□□□ -0.28
EBF1-201ENST00000313708 CROCC2H7BZ55 1655 aa13.31□□□□□ -0.28
EBF1-201ENST00000313708 I3L4J1 428 aa13.31□□□□□ -0.28
EBF1-201ENST00000313708 TRPM2O94759 1503 aa13.31□□□□□ -0.28
EBF1-201ENST00000313708 ATP6V1C1P21283 382 aa13.31□□□□□ -0.28
EBF1-201ENST00000313708 USP38Q8NB14 1042 aa13.31□□□□□ -0.28
EBF1-201ENST00000313708 DNAJC7Q99615 494 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms