RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 CTDNEP1O95476 244 aa16.67■□□□□ 0.26
PPP1CA-201ENST00000312989 CCNE2O96020 404 aa16.67■□□□□ 0.26
PPP1CA-201ENST00000312989 PFKMP08237 780 aa16.67■□□□□ 0.26
PPP1CA-201ENST00000312989 SELPP16109 830 aa16.67■□□□□ 0.26
PPP1CA-201ENST00000312989 DNAJB2P25686 324 aa16.67■□□□□ 0.26
PPP1CA-201ENST00000312989 AK2P54819 239 aa16.67■□□□□ 0.26
PPP1CA-201ENST00000312989 MKRN4PQ13434 485 aaPredicted RBP16.67■□□□□ 0.26
PPP1CA-201ENST00000312989 LRRC8DQ7L1W4 858 aa16.67■□□□□ 0.26
PPP1CA-201ENST00000312989 NIPA1Q7RTP0 329 aa16.67■□□□□ 0.26
PPP1CA-201ENST00000312989 DEFB128Q7Z7B8 93 aa16.67■□□□□ 0.26
PPP1CA-201ENST00000312989 OSBPL7Q9BZF2 842 aa16.67■□□□□ 0.26
PPP1CA-201ENST00000312989 DOCK5Q9H7D0 1870 aa16.67■□□□□ 0.26
PPP1CA-201ENST00000312989 NFASCO94856 1347 aa16.67■□□□□ 0.26
PPP1CA-201ENST00000312989 EMSYQ7Z589 1322 aa16.67■□□□□ 0.26
PPP1CA-201ENST00000312989 TMEM265A0A087WTH1 108 aa16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 TREHO43280 583 aa16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 PFKFB2O60825 505 aa16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 ATG7O95352 703 aa16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 LARGE1O95461 756 aa16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 CIITAP33076 1130 aa16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 ST3GAL1Q11201 340 aa16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 STK3Q13188 491 aa16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 C8orf34Q49A92 452 aa16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 ZNF618Q5T7W0 954 aa16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 UTP14CQ5TAP6 766 aaKnown RBP16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 REXO1Q8N1G1 1221 aaKnown RBP16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 LMBR1Q8WVP7 490 aa16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 SEPT1Q8WYJ6 367 aa16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 FAM161BQ96MY7 647 aa16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 EHMT1Q9H9B1 1298 aa16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 C6orf50Q9HD87 102 aa16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 JPH1Q9HDC5 661 aaPredicted RBP16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 SETD4Q9NVD3 440 aa16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 NOD1Q9Y239 953 aa16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 STXBP5LQ9Y2K9 1186 aa16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 YBX2Q9Y2T7 364 aaKnown RBP16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 SCN5AQ14524 2016 aa16.66■□□□□ 0.26
PPP1CA-201ENST00000312989 IGKV6D-21A0A0A0MT36 114 aa16.65■□□□□ 0.26
PPP1CA-201ENST00000312989 C17orf102A2RUQ5 167 aa16.65■□□□□ 0.26
PPP1CA-201ENST00000312989 ZNF697Q5TEC3 545 aa16.65■□□□□ 0.26
PPP1CA-201ENST00000312989 RPUSD2Q8IZ73 545 aaKnown RBP16.65■□□□□ 0.26
PPP1CA-201ENST00000312989 SH3GLB2Q9NR46 395 aa16.65■□□□□ 0.26
PPP1CA-201ENST00000312989 MYH7BA7E2Y1 1941 aa16.65■□□□□ 0.26
PPP1CA-201ENST00000312989 DEXIO95424 95 aa16.64■□□□□ 0.26
PPP1CA-201ENST00000312989 ACTR2P61160 394 aa16.64■□□□□ 0.26
PPP1CA-201ENST00000312989 MARCH8Q5T0T0 291 aa16.64■□□□□ 0.26
PPP1CA-201ENST00000312989 RETREG2Q8NC44 543 aa16.64■□□□□ 0.26
PPP1CA-201ENST00000312989 DAGLBQ8NCG7 672 aa16.64■□□□□ 0.26
PPP1CA-201ENST00000312989 CCDC12Q8WUD4 166 aaPredicted RBP16.64■□□□□ 0.26
PPP1CA-201ENST00000312989 CDX2Q99626 313 aaPredicted RBP16.64■□□□□ 0.26
PPP1CA-201ENST00000312989 KIF2CQ99661 725 aa16.64■□□□□ 0.26
PPP1CA-201ENST00000312989 SLC9A2Q9UBY0 812 aa16.64■□□□□ 0.26
PPP1CA-201ENST00000312989 MBLAC1A4D2B0 266 aaPredicted RBP16.64■□□□□ 0.25
PPP1CA-201ENST00000312989 FDPSP14324 419 aaKnown RBP16.64■□□□□ 0.25
PPP1CA-201ENST00000312989 GNA11P29992 359 aa16.64■□□□□ 0.25
PPP1CA-201ENST00000312989 ME3Q16798 604 aa16.64■□□□□ 0.25
PPP1CA-201ENST00000312989 CCDC155Q8N6L0 562 aa16.64■□□□□ 0.25
PPP1CA-201ENST00000312989 CCDC148Q8NFR7 591 aa16.64■□□□□ 0.25
PPP1CA-201ENST00000312989 ATP6V0A1Q93050 837 aa16.64■□□□□ 0.25
PPP1CA-201ENST00000312989 TIFAQ96CG3 184 aa16.64■□□□□ 0.25
PPP1CA-201ENST00000312989 GJB4Q9NTQ9 266 aa16.64■□□□□ 0.25
PPP1CA-201ENST00000312989 ZNF215Q9UL58 517 aaPredicted RBP16.64■□□□□ 0.25
PPP1CA-201ENST00000312989 PRUNE2Q8WUY3 3088 aa16.63■□□□□ 0.25
PPP1CA-201ENST00000312989 STK36Q9NRP7 1315 aa16.63■□□□□ 0.25
PPP1CA-201ENST00000312989 UNC80Q8N2C7 3258 aa16.63■□□□□ 0.25
PPP1CA-201ENST00000312989 TET1Q8NFU7 2136 aa16.63■□□□□ 0.25
PPP1CA-201ENST00000312989 ARHGEF15O94989 841 aa16.63■□□□□ 0.25
PPP1CA-201ENST00000312989 MARK3P27448 753 aa16.63■□□□□ 0.25
PPP1CA-201ENST00000312989 RABGGTBP53611 331 aa16.63■□□□□ 0.25
PPP1CA-201ENST00000312989 AKAP17AQ02040 695 aaKnown RBP16.63■□□□□ 0.25
PPP1CA-201ENST00000312989 SSRP1Q08945 709 aaKnown RBP16.63■□□□□ 0.25
PPP1CA-201ENST00000312989 GRIN2CQ14957 1233 aa16.63■□□□□ 0.25
PPP1CA-201ENST00000312989 MCTP2Q6DN12 878 aa16.63■□□□□ 0.25
PPP1CA-201ENST00000312989 RUFY4Q6ZNE9 571 aa16.63■□□□□ 0.25
PPP1CA-201ENST00000312989 PLA2G4DQ86XP0 818 aa16.63■□□□□ 0.25
PPP1CA-201ENST00000312989 ZBTB10Q96DT7 871 aa16.63■□□□□ 0.25
PPP1CA-201ENST00000312989 ERAP1Q9NZ08 941 aa16.63■□□□□ 0.25
PPP1CA-201ENST00000312989 PCDHA4Q9UN74 947 aa16.63■□□□□ 0.25
PPP1CA-201ENST00000312989 NRCAMQ92823 1304 aa16.62■□□□□ 0.25
PPP1CA-201ENST00000312989 MYOGP15173 224 aa16.62■□□□□ 0.25
PPP1CA-201ENST00000312989 ABHD15Q6UXT9 468 aa16.62■□□□□ 0.25
PPP1CA-201ENST00000312989 RPAINQ86UA6 219 aa16.62■□□□□ 0.25
PPP1CA-201ENST00000312989 CCDC60Q8IWA6 550 aaPredicted RBP16.62■□□□□ 0.25
PPP1CA-201ENST00000312989 TRIM22Q8IYM9 498 aa16.62■□□□□ 0.25
PPP1CA-201ENST00000312989 UIMC1Q96RL1 719 aa16.62■□□□□ 0.25
PPP1CA-201ENST00000312989 PHF20Q9BVI0 1012 aa16.62■□□□□ 0.25
PPP1CA-201ENST00000312989 ZNF576Q9H609 170 aa16.62■□□□□ 0.25
PPP1CA-201ENST00000312989 SLC4A7Q9Y6M7 1214 aa16.62■□□□□ 0.25
PPP1CA-201ENST00000312989 SPTBN5Q9NRC6 3674 aaKnown RBP16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 IPO5O00410 1097 aaKnown RBP16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 CPLX1O14810 134 aa16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 CAND2O75155 1236 aa16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 BAIAP3O94812 1187 aa16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 PARNO95453 639 aaKnown RBP16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 ATP2A2P16615 1042 aaKnown RBP16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 ATP4AP20648 1035 aa16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 THPOP40225 353 aa16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 NLRP5P59047 1200 aa16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 WDR5P61964 334 aaKnown RBP16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 MGAT3Q09327 533 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms