RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 STK4Q13043 487 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 Q3C1V9 767 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 UTP14CQ5TAP6 766 aaKnown RBP12.37□□□□□ -0.43
TRIM59-201ENST00000309784 SAMD3Q8N6K7 520 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 GPRC5AQ8NFJ5 357 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 SLC5A5Q92911 643 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 RIT2Q99578 217 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 C7orf25Q9BPX7 421 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 AGO4Q9HCK5 861 aaKnown RBP12.37□□□□□ -0.43
TRIM59-201ENST00000309784 ZBTB39O15060 712 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 ATP9AO75110 1047 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 PRKCSHP14314 528 aaPredicted RBP12.37□□□□□ -0.43
TRIM59-201ENST00000309784 CHMP4BP1P59074 171 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 FKBP1BP68106 108 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 EPHA7Q15375 998 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 UNC13DQ70J99 1090 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 DPP9Q86TI2 863 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 MYCT1Q8N699 235 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 CSGALNACT2Q8N6G5 542 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 ENOX1Q8TC92 643 aaKnown RBP12.37□□□□□ -0.43
TRIM59-201ENST00000309784 CDHR1Q96JP9 859 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 NACC1Q96RE7 527 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 TSG101Q99816 390 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 BPIFA3Q9BQP9 254 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 VAV3Q9UKW4 847 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 ERVK-9P63128 1117 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 ERVK-24P63145 666 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 TMEM119Q4V9L6 283 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 SPATA1Q5VX52 437 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 VSIG10LQ86VR7 867 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 MLXIPQ9HAP2 919 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 N4BP3O15049 544 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 USO1O60763 962 aaKnown RBP12.37□□□□□ -0.43
TRIM59-201ENST00000309784 XKR9Q5GH70 373 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 SRRTQ9BXP5 876 aaKnown RBP12.37□□□□□ -0.43
TRIM59-201ENST00000309784 MRPL44Q9H9J2 332 aaKnown RBP12.37□□□□□ -0.43
TRIM59-201ENST00000309784 RBPJLQ9UBG7 517 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 ADAMTS5Q9UNA0 930 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 UBIAD1Q9Y5Z9 338 aa12.37□□□□□ -0.43
TRIM59-201ENST00000309784 WDR64B1ANS9 1081 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 PTGS1P23219 599 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 MTIF2P46199 727 aaKnown RBP12.36□□□□□ -0.43
TRIM59-201ENST00000309784 VPS16Q9H269 839 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 ZSWIM4Q9H7M6 989 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 BICDL2A1A5D9 508 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 ATP2A1O14983 1001 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 RHOBTB3O94955 611 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 P4HBP07237 508 aaKnown RBP12.36□□□□□ -0.43
TRIM59-201ENST00000309784 COASYQ13057 564 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 ITGB3BPQ13352 177 aaPredicted RBP12.36□□□□□ -0.43
TRIM59-201ENST00000309784 DNTTIP2Q5QJE6 756 aaKnown RBP12.36□□□□□ -0.43
TRIM59-201ENST00000309784 CYFIP1Q7L576 1253 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 NRBP1Q9UHY1 535 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 PPP1R3GB7ZBB8 358 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 NOP56O00567 594 aaKnown RBP12.36□□□□□ -0.43
TRIM59-201ENST00000309784 SLITRK3O94933 977 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 GCNT3O95395 438 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 KRT76Q01546 638 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 SPIRE1Q08AE8 756 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 KCNB1Q14721 858 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 TAF1CQ15572 869 aaPredicted RBP12.36□□□□□ -0.43
TRIM59-201ENST00000309784 SPRYD7Q5W111 196 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 SPATA20Q8TB22 786 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 CPLX3Q8WVH0 158 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 BRI3BPQ8WY22 251 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 PORCNQ9H237 461 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 TUFT1Q9NNX1 390 aa12.36□□□□□ -0.43
TRIM59-201ENST00000309784 KIF20AO95235 890 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 SPATA31C1P0DKV0 1188 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 CYP11B2P19099 503 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 QARSP47897 775 aaKnown RBP12.35□□□□□ -0.43
TRIM59-201ENST00000309784 ALDH5A1P51649 535 aaPredicted RBP12.35□□□□□ -0.43
TRIM59-201ENST00000309784 PPP2R5CQ13362 524 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 NCAPHQ15003 741 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 MYOCDQ8IZQ8 938 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 PARK7Q99497 189 aaKnown RBP12.35□□□□□ -0.43
TRIM59-201ENST00000309784 POLR3CQ9BUI4 534 aaPredicted RBP12.35□□□□□ -0.43
TRIM59-201ENST00000309784 JPH1Q9HDC5 661 aaPredicted RBP12.35□□□□□ -0.43
TRIM59-201ENST00000309784 TAB2Q9NYJ8 693 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 GABBR1Q9UBS5 961 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 ESPNB1AK53 854 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 SWSAP1Q6NVH7 229 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 FAM43AQ8N2R8 423 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 GPRASP2Q96D09 838 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 PDLIM2Q96JY6 352 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 CPA4Q9UI42 421 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 PHIPQ8WWQ0 1821 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 PVALEFA0A1B0GWK0 134 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 EYA4O95677 639 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 XRRA1Q6P2D8 792 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 REEP2Q9BRK0 252 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 SLC9A2Q9UBY0 812 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 RWDD2AQ9UIY3 292 aa12.35□□□□□ -0.43
TRIM59-201ENST00000309784 KLRC4O43908 158 aa12.34□□□□□ -0.43
TRIM59-201ENST00000309784 EIF3JO75822 258 aaKnown RBP12.34□□□□□ -0.43
TRIM59-201ENST00000309784 BCRP11274 1271 aa12.34□□□□□ -0.43
TRIM59-201ENST00000309784 JAK3P52333 1124 aa12.34□□□□□ -0.43
TRIM59-201ENST00000309784 SFR1Q86XK3 245 aa12.34□□□□□ -0.43
TRIM59-201ENST00000309784 GIMAP8Q8ND71 665 aaPredicted RBP12.34□□□□□ -0.43
TRIM59-201ENST00000309784 P2RX5Q93086 422 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms