RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 WHAMMQ8TF30 809 aa15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 TCP11Q8WWU5 503 aa15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 ZKSCAN4Q969J2 545 aaPredicted RBP15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 AK8Q96MA6 479 aa15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 PANK4Q9NVE7 773 aa15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 LAMB4A4D0S4 1761 aa15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 BUB1BO60566 1050 aaPredicted RBP15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 CLTAP09496 248 aa15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 SCP2P22307 547 aa15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 GBP2P32456 591 aaPredicted RBP15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 SLCO1A2P46721 670 aa15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 CDK17Q00537 523 aa15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 CDC37Q16543 378 aaPredicted RBP15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 FIGNQ5HY92 759 aa15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 SWT1Q5T5J6 900 aaKnown RBP15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 KSR1Q8IVT5 923 aa15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 PIK3R5Q8WYR1 880 aa15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 FGFBP2Q9BYJ0 223 aa15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 RAB34Q9BZG1 259 aa15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 CUEDC2Q9H467 287 aa15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 GDF3Q9NR23 364 aa15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 ATP6V0A2Q9Y487 856 aa15.76■□□□□ 0.11
SCUBE2-201ENST00000309263 TTI1O43156 1089 aa15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 KCNQ2O43526 872 aa15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 ADAM9Q13443 819 aa15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 NAA25Q14CX7 972 aa15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 SNCBQ16143 134 aa15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 LRRC47Q8N1G4 583 aaKnown RBP15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 USP38Q8NB14 1042 aa15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 DDX20Q9UHI6 824 aaKnown RBP15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 SUFUQ9UMX1 484 aa15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 GRID2IPA4D2P6 1211 aa15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 E9PMD0 336 aa15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 CTNND1O60716 968 aaKnown RBP15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 ITGB3BPQ13352 177 aaPredicted RBP15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 UBE4AQ14139 1066 aa15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 HGSNATQ68CP4 663 aa15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 HIBCHQ6NVY1 386 aaPredicted RBP15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 LRRC45Q96CN5 670 aa15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 BLOC1S4Q9NUP1 217 aa15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 RNF10Q8N5U6 811 aaKnown RBP15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 TRIM51Q9BSJ1 452 aa15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 NEUROG2Q9H2A3 272 aa15.75■□□□□ 0.11
SCUBE2-201ENST00000309263 KRT13P13646 458 aa15.74■□□□□ 0.11
SCUBE2-201ENST00000309263 SLC9A1P19634 815 aa15.74■□□□□ 0.11
SCUBE2-201ENST00000309263 FNTAP49354 379 aa15.74■□□□□ 0.11
SCUBE2-201ENST00000309263 PTK2Q05397 1052 aa15.74■□□□□ 0.11
SCUBE2-201ENST00000309263 GRM4Q14833 912 aa15.74■□□□□ 0.11
SCUBE2-201ENST00000309263 EYA3Q99504 573 aa15.74■□□□□ 0.11
SCUBE2-201ENST00000309263 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.74■□□□□ 0.11
SCUBE2-201ENST00000309263 KIAA1024Q9UPX6 916 aa15.74■□□□□ 0.11
SCUBE2-201ENST00000309263 LAD1O00515 517 aa15.74■□□□□ 0.11
SCUBE2-201ENST00000309263 VIMP08670 466 aaKnown RBP15.74■□□□□ 0.11
SCUBE2-201ENST00000309263 NAB2Q15742 525 aa15.74■□□□□ 0.11
SCUBE2-201ENST00000309263 SLC18A3Q16572 532 aa15.74■□□□□ 0.11
SCUBE2-201ENST00000309263 FAM133BQ5BKY9 247 aaKnown RBP15.74■□□□□ 0.11
SCUBE2-201ENST00000309263 GKAP1Q5VSY0 366 aaPredicted RBP15.74■□□□□ 0.11
SCUBE2-201ENST00000309263 CHADLQ6NUI6 762 aa15.74■□□□□ 0.11
SCUBE2-201ENST00000309263 DGKHQ86XP1 1220 aa15.74■□□□□ 0.11
SCUBE2-201ENST00000309263 VCPKMTQ9H867 229 aa15.74■□□□□ 0.11
SCUBE2-201ENST00000309263 CD2APQ9Y5K6 639 aa15.74■□□□□ 0.11
SCUBE2-201ENST00000309263 CHD4Q14839 1912 aa15.74■□□□□ 0.11
SCUBE2-201ENST00000309263 LDHBP07195 334 aaKnown RBP15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 EZRP15311 586 aaKnown RBP15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 CLNS1AP54105 237 aaKnown RBP15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 NEDD9Q14511 834 aa15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 PARP10Q53GL7 1025 aa15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 GUF1Q8N442 669 aaKnown RBP15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 BANK1Q8NDB2 785 aa15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 MGARPQ8TDB4 240 aa15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 U2AF1L4Q8WU68 220 aaKnown RBP15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 ANKS1AQ92625 1134 aa15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 CEP72Q9P209 647 aa15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 NOC2LQ9Y3T9 749 aaKnown RBP15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 EIF4E1BA6NMX2 242 aaKnown RBP15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 FSBPO95073 299 aa15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 PCP11498 1178 aaKnown RBP15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 PPP1R2P41236 205 aa15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 ITIH3Q06033 890 aa15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 COASYQ13057 564 aa15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 PICALMQ13492 652 aa15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 RUFY4Q6ZNE9 571 aa15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 CCDC25Q86WR0 208 aa15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 SEC16BQ96JE7 1060 aa15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 SH3GLB2Q9NR46 395 aa15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 ADAMTS7Q9UKP4 1686 aa15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 TMEM110-MUSTN1A8MSY1 372 aa15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 NTSR2O95665 410 aa15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 ZNF211Q13398 564 aaPredicted RBP15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 ALKBH5Q6P6C2 394 aaKnown RBP15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 SPATS2Q86XZ4 545 aaKnown RBP15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 TMBIM4Q9HC24 238 aa15.73■□□□□ 0.11
SCUBE2-201ENST00000309263 USP17L5A8MUK1 530 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 DNM1LO00429 736 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 MEIS1O00470 390 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 NR2F2P24468 414 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 LRRC63Q05C16 580 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 ZNF844Q08AG5 666 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 NBPF9Q3BBW0 867 aa15.72■□□□□ 0.11
SCUBE2-201ENST00000309263 CYB5D1Q6P9G0 228 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms