RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 ERVK-9P63128 1117 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 ERVK-24P63145 666 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 ZNF200P98182 395 aaPredicted RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 HSDL1Q3SXM5 330 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 KRT79Q5XKE5 535 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 FMR1NBQ8N0W7 255 aaPredicted RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 ST13P5Q8NFI4 369 aaPredicted RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 CCDC12Q8WUD4 166 aaPredicted RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 ANP32BQ92688 251 aaKnown RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 BICD1Q96G01 975 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 DYDC2Q96IM9 177 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 RNF208Q9H0X6 261 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 PRDM16Q9HAZ2 1276 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 KCNH7Q9NS40 1196 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 FAM13BQ9NYF5 915 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 GABBR1Q9UBS5 961 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 ANAPC4Q9UJX5 808 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 MTUS1Q9ULD2 1270 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 GDAQ9Y2T3 454 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 VPS13AQ96RL7 3174 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 CCDC85CA6NKD9 419 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 GOLGA6L19H0YKK7 550 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 CETPP11597 493 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 COPB2P35606 906 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 USP8P40818 1118 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 TBX2Q13207 712 aaPredicted RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 ANO6Q4KMQ2 910 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 PDXDC2PQ6P474 469 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 MIER3Q7Z3K6 550 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 TMEM130Q8N3G9 435 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 SYTL5Q8TDW5 730 aaPredicted RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 MED15Q96RN5 788 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 TRIM5Q9C035 493 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 RYDENQ9NUL5 291 aaKnown RBP5.51□□□□□ -1.53
CAST-201ENST00000309190 INTS13Q9NVM9 706 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 HPSEQ9Y251 543 aa5.51□□□□□ -1.53
CAST-201ENST00000309190 TAF1LQ8IZX4 1826 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 ADAMTSL1Q8N6G6 1762 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 LRRIQ4A6NIV6 560 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 TISP43B9A030 160 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 EML1O00423 815 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 SLC34A2O95436 690 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 PLCG1P19174 1290 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 U2AF2P26368 475 aaKnown RBP eCLIP5.5□□□□□ -1.535e-13■■■□□ 18.9
CAST-201ENST00000309190 MTFR1Q15390 333 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 KCNK18Q7Z418 384 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 CABP7Q86V35 215 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 SYCP3Q8IZU3 236 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 AFG1LQ8WV93 481 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 CCDC127Q96BQ5 260 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 SPATA33Q96N06 139 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 SCAND2PQ9GZW5 306 aaPredicted RBP5.5□□□□□ -1.53
CAST-201ENST00000309190 ACAD9Q9H845 621 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 CNTRLQ7Z7A1 2325 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 ZC3H4Q9UPT8 1303 aaKnown RBP5.5□□□□□ -1.53
CAST-201ENST00000309190 MEIS2O14770 477 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 ITGB5P18084 799 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 MDM2Q00987 491 aaPredicted RBP5.5□□□□□ -1.53
CAST-201ENST00000309190 LLGL1Q15334 1064 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 TERF2Q15554 542 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 COL13A1Q5TAT6 717 aaPredicted RBP5.5□□□□□ -1.53
CAST-201ENST00000309190 CEP135Q66GS9 1140 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 ZBTB33Q86T24 672 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 ZNF579Q8NAF0 562 aaKnown RBP5.5□□□□□ -1.53
CAST-201ENST00000309190 LINC00301Q8NCQ3 95 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 MRPS27Q92552 414 aaKnown RBP5.5□□□□□ -1.53
CAST-201ENST00000309190 DEFB118Q96PH6 123 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 PPP1R12CQ9BZL4 782 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 GBP3Q9H0R5 595 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 OGFRQ9NZT2 677 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 ANKFY1Q9P2R3 1169 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 FEM1BQ9UK73 627 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 ARFGEF1Q9Y6D6 1849 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 TRIM49BA6NDI0 452 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 WDR46O15213 610 aaKnown RBP5.5□□□□□ -1.53
CAST-201ENST00000309190 CAPN2P17655 700 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 GABPB1Q06547 395 aaPredicted RBP5.5□□□□□ -1.53
CAST-201ENST00000309190 ARID5BQ14865 1188 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 PPP4R3BQ5MIZ7 849 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 ARMCX5Q6P1M9 558 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 SHC4Q6S5L8 630 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 CATSPERGQ6ZRH7 1159 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 MSL3Q8N5Y2 521 aaKnown RBP5.5□□□□□ -1.53
CAST-201ENST00000309190 AOPEPQ8N6M6 819 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 MRRFQ96E11 262 aaKnown RBP5.5□□□□□ -1.53
CAST-201ENST00000309190 KIAA1683Q9H0B3 1180 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 RNF186Q9NXI6 227 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 BCCIPQ9P287 314 aaKnown RBP eCLIP5.5□□□□□ -1.53
CAST-201ENST00000309190 PCDHA5Q9Y5H7 936 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 MRPL42Q9Y6G3 142 aaKnown RBP5.5□□□□□ -1.53
CAST-201ENST00000309190 F5P12259 2224 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 SPEGQ15772 3267 aa5.5□□□□□ -1.53
CAST-201ENST00000309190 ANKRD31Q8N7Z5 1873 aa5.49□□□□□ -1.53
CAST-201ENST00000309190 A0A087X0B3 334 aa5.49□□□□□ -1.53
CAST-201ENST00000309190 SPDYE5A6NIY4 337 aa5.49□□□□□ -1.53
CAST-201ENST00000309190 SYN1P17600 705 aa5.49□□□□□ -1.53
CAST-201ENST00000309190 DSG3P32926 999 aa5.49□□□□□ -1.53
CAST-201ENST00000309190 CYP2J2P51589 502 aa5.49□□□□□ -1.53
CAST-201ENST00000309190 GTF2A2P52657 109 aa5.49□□□□□ -1.53
CAST-201ENST00000309190 CAP1Q01518 475 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms