RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 CEP63Q96MT8 703 aa12.46□□□□□ -0.41
PCDHGC3-201ENST00000308177 WRNIP1Q96S55 665 aa12.46□□□□□ -0.41
PCDHGC3-201ENST00000308177 RGL2O15211 777 aa12.46□□□□□ -0.41
PCDHGC3-201ENST00000308177 FCER1AP12319 257 aa12.46□□□□□ -0.41
PCDHGC3-201ENST00000308177 SMARCA1P28370 1054 aa12.46□□□□□ -0.41
PCDHGC3-201ENST00000308177 ZNRF3Q9ULT6 936 aa12.46□□□□□ -0.41
PCDHGC3-201ENST00000308177 ZHX2Q9Y6X8 837 aa12.46□□□□□ -0.41
PCDHGC3-201ENST00000308177 GFPT2O94808 682 aa12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 ATP2A2P16615 1042 aaKnown RBP12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 MXI1P50539 228 aa12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 ALCAMQ13740 583 aa12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 MAIP1Q8WWC4 291 aa12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 POLD4Q9HCU8 107 aa12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 KCNK9Q9NPC2 374 aa12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 SLC5A4Q9NY91 659 aa12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 ADAMTS1Q9UHI8 967 aa12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 FEZ2Q9UHY8 353 aaPredicted RBP12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 JRKLQ9Y4A0 524 aa12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 PCDHA13Q9Y5I0 950 aa12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 PIK3C2AO00443 1686 aa12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 USP27XA6NNY8 438 aa12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 TNNC2P02585 160 aa12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 TMEM191BP0C7N4 346 aa12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 P4HA1P13674 534 aa12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 SNX16P57768 344 aa12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 PTK2Q05397 1052 aa12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 MTERF2Q49AM1 385 aa12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 NOD1Q9Y239 953 aa12.46□□□□□ -0.42
PCDHGC3-201ENST00000308177 GAS8O95995 478 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 PSAPP07602 524 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 GUCY2FP51841 1108 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 PPP1R14CQ8TAE6 165 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 DYDC2Q96IM9 177 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 TMEM60Q9H2L4 133 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 TTC26A0AVF1 554 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 HINFPQ9BQA5 517 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 KCNF1Q9H3M0 494 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 MAD2L2Q9UI95 211 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 MOCS3O95396 460 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 TMOD1P28289 359 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 BPIFB4P59827 614 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 CCNA1P78396 465 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 PDXDC2PQ6P474 469 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 EEPD1Q7L9B9 569 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 TBC1D22BQ9NU19 505 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 NFAT5O94916 1531 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 PEX3P56589 373 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 IGBP1P78318 339 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 MTMR3Q13615 1198 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 STYK1Q6J9G0 422 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 PADI6Q6TGC4 694 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 CEP128Q6ZU80 1094 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 ADPGKQ9BRR6 497 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 ZMYND15Q9H091 742 aa12.45□□□□□ -0.42
PCDHGC3-201ENST00000308177 IPO5O00410 1097 aaKnown RBP12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 NR3C1P04150 777 aa12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 NSFP46459 744 aaKnown RBP12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 ADSSL1Q8N142 457 aa12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 ANKS4BQ8N8V4 417 aa12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 BANK1Q8NDB2 785 aa12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 JPH2Q9BR39 696 aaPredicted RBP12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 JMJD4Q9H9V9 463 aa12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 ST7Q9NRC1 585 aa12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 SERPINA10Q9UK55 444 aa12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 ZBTB12Q9Y330 459 aaPredicted RBP12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 FMN2Q9NZ56 1722 aa12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 PIK3CAP42336 1068 aa12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 IREB2P48200 963 aaKnown RBP12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 JAK3P52333 1124 aa12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 ADAT2Q7Z6V5 191 aaKnown RBP12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 LDHDQ86WU2 507 aa12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 RNF146Q9NTX7 359 aa12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 KNOP1Q1ED39 458 aaKnown RBP12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 NAALADL2Q58DX5 795 aa12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 RTFDC1Q9BY42 306 aaPredicted RBP12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 UBE2TQ9NPD8 197 aaPredicted RBP12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 ADGRG1Q9Y653 693 aa12.44□□□□□ -0.42
PCDHGC3-201ENST00000308177 A0A1B0GTH6 734 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 PALM3A6NDB9 673 aaPredicted RBP12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 A6NNZ2 444 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 WDR64B1ANS9 1081 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 INO80B-WBP1J3KQ70 363 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 TUBB8Q3ZCM7 444 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 ANKRD40Q6AI12 368 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 SNRNP48Q6IEG0 339 aaKnown RBP12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 ALKBH5Q6P6C2 394 aaKnown RBP12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 LRP10Q7Z4F1 713 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 NEK9Q8TD19 979 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 UBE2Q2Q8WVN8 375 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 INO80BQ9C086 356 aaPredicted RBP12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 HOXC10Q9NYD6 342 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 A0A1W2PQC6 194 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 ESYT2A0FGR8 921 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 OSBPP22059 807 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 CXCR5P32302 372 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 KCNH2Q12809 1159 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 TFDP1Q14186 410 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 MESDQ14696 234 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 CEP55Q53EZ4 464 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 C10orf76Q5T2E6 689 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms