RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 MRPL11Q9Y3B7 192 aaKnown RBP13.81□□□□□ -0.2
SMIM4-201ENST00000307106 MRPL42Q9Y6G3 142 aaKnown RBP13.81□□□□□ -0.2
SMIM4-201ENST00000307106 CFBP00751 764 aa13.8□□□□□ -0.2
SMIM4-201ENST00000307106 GHRP10912 638 aa13.8□□□□□ -0.2
SMIM4-201ENST00000307106 ATF7P17544 494 aaPredicted RBP13.8□□□□□ -0.2
SMIM4-201ENST00000307106 SP2Q02086 613 aa13.8□□□□□ -0.2
SMIM4-201ENST00000307106 NAALADL2Q58DX5 795 aa13.8□□□□□ -0.2
SMIM4-201ENST00000307106 ZBTB33Q86T24 672 aa13.8□□□□□ -0.2
SMIM4-201ENST00000307106 POF1BQ8WVV4 589 aa13.8□□□□□ -0.2
SMIM4-201ENST00000307106 PDCD2LQ9BRP1 358 aa13.8□□□□□ -0.2
SMIM4-201ENST00000307106 CHMP4BQ9H444 224 aaKnown RBP13.8□□□□□ -0.2
SMIM4-201ENST00000307106 SETD4Q9NVD3 440 aa13.8□□□□□ -0.2
SMIM4-201ENST00000307106 BAZ2BQ9UIF8 2168 aaKnown RBP13.8□□□□□ -0.2
SMIM4-201ENST00000307106 ENPP3O14638 875 aa13.79□□□□□ -0.2
SMIM4-201ENST00000307106 CHRNA1P02708 482 aa13.79□□□□□ -0.2
SMIM4-201ENST00000307106 QRICH1Q2TAL8 776 aa13.79□□□□□ -0.2
SMIM4-201ENST00000307106 ADGRF4Q8IZF3 695 aa13.79□□□□□ -0.2
SMIM4-201ENST00000307106 KLHL23Q8NBE8 558 aa13.79□□□□□ -0.2
SMIM4-201ENST00000307106 SUSD6Q92537 303 aa13.79□□□□□ -0.2
SMIM4-201ENST00000307106 NKD2Q969F2 451 aaPredicted RBP13.79□□□□□ -0.2
SMIM4-201ENST00000307106 TLE6Q9H808 572 aa13.79□□□□□ -0.2
SMIM4-201ENST00000307106 CACNA1BQ00975 2339 aa13.79□□□□□ -0.2
SMIM4-201ENST00000307106 NOP56O00567 594 aaKnown RBP13.78□□□□□ -0.2
SMIM4-201ENST00000307106 TGFB3P10600 412 aa13.78□□□□□ -0.2
SMIM4-201ENST00000307106 HSD17B4P51659 736 aa13.78□□□□□ -0.2
SMIM4-201ENST00000307106 ARHGAP4P98171 946 aa13.78□□□□□ -0.2
SMIM4-201ENST00000307106 CMTR2Q8IYT2 770 aaKnown RBP13.78□□□□□ -0.2
SMIM4-201ENST00000307106 TMEM105Q8N8V8 129 aa13.78□□□□□ -0.2
SMIM4-201ENST00000307106 PI4K2BQ8TCG2 481 aa13.78□□□□□ -0.2
SMIM4-201ENST00000307106 LMBR1Q8WVP7 490 aa13.78□□□□□ -0.2
SMIM4-201ENST00000307106 GPKOWQ92917 476 aaPredicted RBP eCLIP13.78□□□□□ -0.2
SMIM4-201ENST00000307106 USP26Q9BXU7 913 aa13.78□□□□□ -0.2
SMIM4-201ENST00000307106 EHMT1Q9H9B1 1298 aa13.78□□□□□ -0.2
SMIM4-201ENST00000307106 PCDHGC5Q9Y5F6 944 aa13.78□□□□□ -0.2
SMIM4-201ENST00000307106 TTC41PQ6P2S7 1318 aa13.78□□□□□ -0.2
SMIM4-201ENST00000307106 DHX16O60231 1041 aaKnown RBP13.77□□□□□ -0.21
SMIM4-201ENST00000307106 ADAM17P78536 824 aa13.77□□□□□ -0.21
SMIM4-201ENST00000307106 RBM10P98175 930 aaKnown RBP13.77□□□□□ -0.21
SMIM4-201ENST00000307106 LPIN1Q14693 890 aa13.77□□□□□ -0.21
SMIM4-201ENST00000307106 PGM5Q15124 567 aa13.77□□□□□ -0.21
SMIM4-201ENST00000307106 ALX1Q15699 326 aa13.77□□□□□ -0.21
SMIM4-201ENST00000307106 PAN2Q504Q3 1202 aaKnown RBP13.77□□□□□ -0.21
SMIM4-201ENST00000307106 GVINP1Q7Z2Y8 2422 aa13.77□□□□□ -0.21
SMIM4-201ENST00000307106 FRMD5Q7Z6J6 570 aa13.77□□□□□ -0.21
SMIM4-201ENST00000307106 VSIG10LQ86VR7 867 aa13.77□□□□□ -0.21
SMIM4-201ENST00000307106 MIER1Q8N108 512 aa13.77□□□□□ -0.21
SMIM4-201ENST00000307106 ADSSL1Q8N142 457 aa13.77□□□□□ -0.21
SMIM4-201ENST00000307106 IL31RAQ8NI17 732 aa13.77□□□□□ -0.21
SMIM4-201ENST00000307106 ZFP91Q96JP5 570 aaPredicted RBP13.77□□□□□ -0.21
SMIM4-201ENST00000307106 NEK1Q96PY6 1258 aa13.77□□□□□ -0.21
SMIM4-201ENST00000307106 BCAS3Q9H6U6 928 aa13.77□□□□□ -0.21
SMIM4-201ENST00000307106 SUPT16HQ9Y5B9 1047 aaKnown RBP13.77□□□□□ -0.21
SMIM4-201ENST00000307106 EVPLQ92817 2033 aa13.76□□□□□ -0.21
SMIM4-201ENST00000307106 OPLAHO14841 1288 aa13.76□□□□□ -0.21
SMIM4-201ENST00000307106 PER2O15055 1255 aa13.76□□□□□ -0.21
SMIM4-201ENST00000307106 FGAP02671 866 aa13.76□□□□□ -0.21
SMIM4-201ENST00000307106 SP100P23497 879 aaPredicted RBP13.76□□□□□ -0.21
SMIM4-201ENST00000307106 HAND2P61296 217 aa13.76□□□□□ -0.21
SMIM4-201ENST00000307106 GHRHRQ02643 423 aa13.76□□□□□ -0.21
SMIM4-201ENST00000307106 MGAT3Q09327 533 aa13.76□□□□□ -0.21
SMIM4-201ENST00000307106 MCTP2Q6DN12 878 aa13.76□□□□□ -0.21
SMIM4-201ENST00000307106 STOX1Q6ZVD7 989 aa13.76□□□□□ -0.21
SMIM4-201ENST00000307106 TRIM50Q86XT4 487 aa13.76□□□□□ -0.21
SMIM4-201ENST00000307106 VN1R2Q8NFZ6 395 aa13.76□□□□□ -0.21
SMIM4-201ENST00000307106 MICAL1Q8TDZ2 1067 aa13.76□□□□□ -0.21
SMIM4-201ENST00000307106 ATP8B4Q8TF62 1192 aa13.76□□□□□ -0.21
SMIM4-201ENST00000307106 ZKSCAN3Q9BRR0 538 aa13.76□□□□□ -0.21
SMIM4-201ENST00000307106 VAT1LQ9HCJ6 419 aa13.76□□□□□ -0.21
SMIM4-201ENST00000307106 ZNF215Q9UL58 517 aaPredicted RBP13.76□□□□□ -0.21
SMIM4-201ENST00000307106 FANCMQ8IYD8 2048 aa13.75□□□□□ -0.21
SMIM4-201ENST00000307106 FSD2A1L4K1 749 aa13.75□□□□□ -0.21
SMIM4-201ENST00000307106 PPFIA3O75145 1194 aa13.75□□□□□ -0.21
SMIM4-201ENST00000307106 CCND2P30279 289 aa13.75□□□□□ -0.21
SMIM4-201ENST00000307106 ASPRV1Q53RT3 343 aa13.75□□□□□ -0.21
SMIM4-201ENST00000307106 FBXO47Q5MNV8 452 aa13.75□□□□□ -0.21
SMIM4-201ENST00000307106 MFSD6Q6ZSS7 791 aa13.75□□□□□ -0.21
SMIM4-201ENST00000307106 KREMEN2Q8NCW0 462 aa13.75□□□□□ -0.21
SMIM4-201ENST00000307106 PNMA1Q8ND90 353 aa13.75□□□□□ -0.21
SMIM4-201ENST00000307106 LINC01599Q8WXQ3 324 aa13.75□□□□□ -0.21
SMIM4-201ENST00000307106 GPR20Q99678 358 aa13.75□□□□□ -0.21
SMIM4-201ENST00000307106 DCTPP1Q9H773 170 aa13.75□□□□□ -0.21
SMIM4-201ENST00000307106 JMJD4Q9H9V9 463 aa13.75□□□□□ -0.21
SMIM4-201ENST00000307106 MAP3K20Q9NYL2 800 aaKnown RBP13.75□□□□□ -0.21
SMIM4-201ENST00000307106 DENND4AQ7Z401 1863 aa13.75□□□□□ -0.21
SMIM4-201ENST00000307106 DNAH14Q0VDD8 3507 aa13.75□□□□□ -0.21
SMIM4-201ENST00000307106 NRCAMQ92823 1304 aa13.74□□□□□ -0.21
SMIM4-201ENST00000307106 DMXL1Q9Y485 3027 aa13.74□□□□□ -0.21
SMIM4-201ENST00000307106 PCP11498 1178 aaKnown RBP13.74□□□□□ -0.21
SMIM4-201ENST00000307106 HOXA13P31271 388 aaPredicted RBP13.74□□□□□ -0.21
SMIM4-201ENST00000307106 HNRNPUQ00839 825 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMIM4-201ENST00000307106 MTMR3Q13615 1198 aa13.74□□□□□ -0.21
SMIM4-201ENST00000307106 DUSP6Q16828 381 aa13.74□□□□□ -0.21
SMIM4-201ENST00000307106 UTP14CQ5TAP6 766 aaKnown RBP13.74□□□□□ -0.21
SMIM4-201ENST00000307106 TAF2Q6P1X5 1199 aa13.74□□□□□ -0.21
SMIM4-201ENST00000307106 METTL7BQ6UX53 244 aa13.74□□□□□ -0.21
SMIM4-201ENST00000307106 RUFY4Q6ZNE9 571 aa13.74□□□□□ -0.21
SMIM4-201ENST00000307106 TSHZ1Q6ZSZ6 1077 aa13.74□□□□□ -0.21
SMIM4-201ENST00000307106 DGKHQ86XP1 1220 aa13.74□□□□□ -0.21
SMIM4-201ENST00000307106 NPAS4Q8IUM7 802 aa13.74□□□□□ -0.21
SMIM4-201ENST00000307106 UBALD2Q8IYN6 164 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms