RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 PIGOQ8TEQ8 1089 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 DYDC2Q96IM9 177 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 WRNIP1Q96S55 665 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 CHP1Q99653 195 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 MXRA8Q9BRK3 442 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 BHMT2Q9H2M3 363 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 UNC45AQ9H3U1 944 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 AGPAT5Q9NUQ2 364 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 SSC5DA1L4H1 1573 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 DOCK1Q14185 1865 aa7.27□□□□□ -1.25
USP47-201ENST00000305481 CHMP2AO43633 222 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 ABL1P00519 1130 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 ALAS1P13196 640 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 ERCC3P19447 782 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 HOXA7P31268 230 aaPredicted RBP7.26□□□□□ -1.25
USP47-201ENST00000305481 MRPS9P82933 396 aaKnown RBP7.26□□□□□ -1.25
USP47-201ENST00000305481 NELFCDQ8IXH7 590 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 SYTL5Q8TDW5 730 aaPredicted RBP7.26□□□□□ -1.25
USP47-201ENST00000305481 UPF1Q92900 1129 aaKnown RBP eCLIP7.26□□□□□ -1.258e-7■■■□□ 14.9
USP47-201ENST00000305481 ERGIC2Q96RQ1 377 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 WDR24Q96S15 920 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 ZNF577Q9BSK1 485 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 L2HGDHQ9H9P8 463 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 HOMER2Q9NSB8 354 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 DNAI1Q9UI46 699 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 RIPK3Q9Y572 518 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 PARP14Q460N5 1801 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 RLFQ13129 1914 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 IPO5O00410 1097 aaKnown RBP7.26□□□□□ -1.25
USP47-201ENST00000305481 VWA5AO00534 786 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 GAS7O60861 476 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 EYA4O95677 639 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 VWA3BQ502W6 1294 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 DLK2Q6UY11 383 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 EPM2AIP1Q7L775 607 aaPredicted RBP7.26□□□□□ -1.25
USP47-201ENST00000305481 TPH2Q8IWU9 490 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 PURBQ96QR8 312 aaKnown RBP7.26□□□□□ -1.25
USP47-201ENST00000305481 WDR11Q9BZH6 1224 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 IRX2Q9BZI1 471 aaPredicted RBP7.26□□□□□ -1.25
USP47-201ENST00000305481 NDST4Q9H3R1 872 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 TUFT1Q9NNX1 390 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 GGA3Q9NZ52 723 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 SIK3Q9Y2K2 1263 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 STK24Q9Y6E0 443 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 PHLPP2Q6ZVD8 1323 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 EPHB6O15197 1021 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 DHX15O43143 795 aaKnown RBP7.26□□□□□ -1.25
USP47-201ENST00000305481 TUBB4AP04350 444 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 KRT18P05783 430 aaKnown RBP7.26□□□□□ -1.25
USP47-201ENST00000305481 TPM1P09493 284 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 CCDC175P0C221 793 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 DCAF15Q66K64 600 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 RINT1Q6NUQ1 792 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 ARHGAP27Q6ZUM4 889 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 SFR1Q86XK3 245 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 TMTC1Q8IUR5 882 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 APOBEC3FQ8IUX4 373 aaKnown RBP7.26□□□□□ -1.25
USP47-201ENST00000305481 GPC2Q8N158 579 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 ZNF280CQ8ND82 737 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 ACRBPQ8NEB7 543 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 OR8K1Q8NGG5 319 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 BBXQ8WY36 941 aaPredicted RBP7.26□□□□□ -1.25
USP47-201ENST00000305481 ATG4CQ96DT6 458 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 TAAR1Q96RJ0 339 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 EHMT1Q9H9B1 1298 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 KCNH7Q9NS40 1196 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 LUC7L2Q9Y383 392 aaKnown RBP7.26□□□□□ -1.25
USP47-201ENST00000305481 RABGAP1Q9Y3P9 1069 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 PHIPQ8WWQ0 1821 aa7.26□□□□□ -1.25
USP47-201ENST00000305481 FRMPD4Q14CM0 1322 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 USP14P54578 494 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 RPS6P62753 249 aaKnown RBP7.25□□□□□ -1.25
USP47-201ENST00000305481 FKBP3Q00688 224 aaKnown RBP7.25□□□□□ -1.25
USP47-201ENST00000305481 SETQ01105 290 aaPredicted RBP7.25□□□□□ -1.25
USP47-201ENST00000305481 CYP26C1Q6V0L0 522 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 C1orf186Q6ZWK4 172 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 MCF2L2Q86YR7 1114 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 ZC3H3Q8IXZ2 948 aaKnown RBP7.25□□□□□ -1.25
USP47-201ENST00000305481 LRRN4CLQ8ND94 238 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 KLRG1Q96E93 195 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 ZHX3Q9H4I2 956 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 ZNF215Q9UL58 517 aaPredicted RBP7.25□□□□□ -1.25
USP47-201ENST00000305481 REXO2Q9Y3B8 237 aaKnown RBP7.25□□□□□ -1.25
USP47-201ENST00000305481 UBIAD1Q9Y5Z9 338 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 ZHX2Q9Y6X8 837 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 SFI1A8K8P3 1242 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 TRAF5O00463 557 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 MYBP10242 640 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 BCRP11274 1271 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 HMGCS2P54868 508 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 NCBP1Q09161 790 aaKnown RBP7.25□□□□□ -1.25
USP47-201ENST00000305481 ITGB3BPQ13352 177 aaPredicted RBP7.25□□□□□ -1.25
USP47-201ENST00000305481 MEA1Q16626 185 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 MAN2A1Q16706 1144 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 TKFCQ3LXA3 575 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 PCNX4Q63HM2 1172 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 KCTD17Q8N5Z5 321 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 CCDC155Q8N6L0 562 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 REPS2Q8NFH8 660 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 TSG101Q99816 390 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms