RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 PPFIA3O75145 1194 aa11.71□□□□□ -0.53
COL4A3-201ENST00000304990 FGAP02671 866 aa11.71□□□□□ -0.53
COL4A3-201ENST00000304990 PARP1P09874 1014 aaKnown RBP11.71□□□□□ -0.53
COL4A3-201ENST00000304990 TGFB3P10600 412 aa11.71□□□□□ -0.53
COL4A3-201ENST00000304990 PCP11498 1178 aaKnown RBP11.71□□□□□ -0.53
COL4A3-201ENST00000304990 IBSPP21815 317 aaPredicted RBP11.71□□□□□ -0.53
COL4A3-201ENST00000304990 PGM5Q15124 567 aa11.71□□□□□ -0.53
COL4A3-201ENST00000304990 ALX1Q15699 326 aa11.71□□□□□ -0.53
COL4A3-201ENST00000304990 GNPTABQ3T906 1256 aa11.71□□□□□ -0.53
COL4A3-201ENST00000304990 PAN2Q504Q3 1202 aaKnown RBP11.71□□□□□ -0.53
COL4A3-201ENST00000304990 ASPRV1Q53RT3 343 aa11.71□□□□□ -0.53
COL4A3-201ENST00000304990 CCDC178Q5BJE1 867 aa11.71□□□□□ -0.53
COL4A3-201ENST00000304990 FAM26DQ5JW98 314 aa11.71□□□□□ -0.53
COL4A3-201ENST00000304990 SPOUT1Q5T280 376 aaKnown RBP11.71□□□□□ -0.53
COL4A3-201ENST00000304990 IQCA1Q86XH1 822 aa11.71□□□□□ -0.53
COL4A3-201ENST00000304990 PI4K2BQ8TCG2 481 aa11.71□□□□□ -0.53
COL4A3-201ENST00000304990 POF1BQ8WVV4 589 aa11.71□□□□□ -0.53
COL4A3-201ENST00000304990 CLP1Q92989 425 aaKnown RBP11.71□□□□□ -0.53
COL4A3-201ENST00000304990 P2RX5Q93086 422 aa11.71□□□□□ -0.53
COL4A3-201ENST00000304990 AMNQ9BXJ7 453 aa11.71□□□□□ -0.53
COL4A3-201ENST00000304990 USP26Q9BXU7 913 aa11.71□□□□□ -0.53
COL4A3-201ENST00000304990 TLE6Q9H808 572 aa11.71□□□□□ -0.53
COL4A3-201ENST00000304990 HELLSQ9NRZ9 838 aa11.71□□□□□ -0.53
COL4A3-201ENST00000304990 CLEC1BQ9P126 229 aa11.71□□□□□ -0.53
COL4A3-201ENST00000304990 PLXNA4Q9HCM2 1894 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 ENPP3O14638 875 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 DGKIO75912 1065 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 SRGAP2BP0DMP2 458 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 MX1P20591 662 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 HOXA13P31271 388 aaPredicted RBP11.7□□□□□ -0.54
COL4A3-201ENST00000304990 ICAM3P32942 547 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 HSD17B4P51659 736 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 NUBP1P53384 320 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 SP2Q02086 613 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 SP4Q02446 784 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 CBX2Q14781 532 aaPredicted RBP11.7□□□□□ -0.54
COL4A3-201ENST00000304990 PTPN21Q16825 1174 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 NAALADL2Q58DX5 795 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 ERMP1Q7Z2K6 904 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 FCHSD1Q86WN1 690 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 DGKHQ86XP1 1220 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 KLHL23Q8NBE8 558 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 LMBR1Q8WVP7 490 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 FOXD4L1Q9NU39 408 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 MAP3K20Q9NYL2 800 aaKnown RBP11.7□□□□□ -0.54
COL4A3-201ENST00000304990 LRFN2Q9ULH4 789 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 TRPC6Q9Y210 931 aa11.7□□□□□ -0.54
COL4A3-201ENST00000304990 MRPL42Q9Y6G3 142 aaKnown RBP11.7□□□□□ -0.54
COL4A3-201ENST00000304990 RGS20O76081 388 aa11.69□□□□□ -0.54
COL4A3-201ENST00000304990 CHRNA1P02708 482 aa11.69□□□□□ -0.54
COL4A3-201ENST00000304990 ITGB1P05556 798 aa11.69□□□□□ -0.54
COL4A3-201ENST00000304990 LINC00271P0C7V0 271 aa11.69□□□□□ -0.54
COL4A3-201ENST00000304990 STAG3L1P0CL83 205 aa11.69□□□□□ -0.54
COL4A3-201ENST00000304990 DNAJB1P25685 340 aa11.69□□□□□ -0.54
COL4A3-201ENST00000304990 HOXC8P31273 242 aa11.69□□□□□ -0.54
COL4A3-201ENST00000304990 ID4P47928 161 aa11.69□□□□□ -0.54
COL4A3-201ENST00000304990 NEDD9Q14511 834 aa11.69□□□□□ -0.54
COL4A3-201ENST00000304990 MCMDC2Q4G0Z9 681 aa11.69□□□□□ -0.54
COL4A3-201ENST00000304990 ASCL5Q7RTU5 278 aa11.69□□□□□ -0.54
COL4A3-201ENST00000304990 VSIG10LQ86VR7 867 aa11.69□□□□□ -0.54
COL4A3-201ENST00000304990 CMTR2Q8IYT2 770 aaKnown RBP11.69□□□□□ -0.54
COL4A3-201ENST00000304990 SPPL3Q8TCT6 385 aa11.69□□□□□ -0.54
COL4A3-201ENST00000304990 GPKOWQ92917 476 aaPredicted RBP eCLIP11.69□□□□□ -0.54
COL4A3-201ENST00000304990 EVI5LQ96CN4 794 aa11.69□□□□□ -0.54
COL4A3-201ENST00000304990 ZNF689Q96CS4 500 aaPredicted RBP11.69□□□□□ -0.54
COL4A3-201ENST00000304990 ASIC4Q96FT7 647 aa11.69□□□□□ -0.54
COL4A3-201ENST00000304990 RIPOR3Q96MK2 946 aa11.69□□□□□ -0.54
COL4A3-201ENST00000304990 NEK1Q96PY6 1258 aa11.69□□□□□ -0.54
COL4A3-201ENST00000304990 JMJD4Q9H9V9 463 aa11.69□□□□□ -0.54
COL4A3-201ENST00000304990 TSHZ2Q9NRE2 1034 aa11.69□□□□□ -0.54
COL4A3-201ENST00000304990 NRCAMQ92823 1304 aa11.68□□□□□ -0.54
COL4A3-201ENST00000304990 FSD2A1L4K1 749 aa11.68□□□□□ -0.54
COL4A3-201ENST00000304990 PRR23AA6NEV1 266 aa11.68□□□□□ -0.54
COL4A3-201ENST00000304990 PROB1E7EW31 1015 aa11.68□□□□□ -0.54
COL4A3-201ENST00000304990 GCOM1H8Y6P7 765 aaPredicted RBP11.68□□□□□ -0.54
COL4A3-201ENST00000304990 PER2O15055 1255 aa11.68□□□□□ -0.54
COL4A3-201ENST00000304990 GALR2O43603 387 aaPredicted RBP11.68□□□□□ -0.54
COL4A3-201ENST00000304990 POLR2MP0CAP2 368 aa11.68□□□□□ -0.54
COL4A3-201ENST00000304990 ATF7P17544 494 aaPredicted RBP11.68□□□□□ -0.54
COL4A3-201ENST00000304990 SP100P23497 879 aaPredicted RBP11.68□□□□□ -0.54
COL4A3-201ENST00000304990 CAMK1Q14012 370 aa11.68□□□□□ -0.54
COL4A3-201ENST00000304990 LPIN1Q14693 890 aa11.68□□□□□ -0.54
COL4A3-201ENST00000304990 TAF2Q6P1X5 1199 aa11.68□□□□□ -0.54
COL4A3-201ENST00000304990 METTL7BQ6UX53 244 aa11.68□□□□□ -0.54
COL4A3-201ENST00000304990 CYFIP1Q7L576 1253 aa11.68□□□□□ -0.54
COL4A3-201ENST00000304990 TRIM50Q86XT4 487 aa11.68□□□□□ -0.54
COL4A3-201ENST00000304990 NPAS4Q8IUM7 802 aa11.68□□□□□ -0.54
COL4A3-201ENST00000304990 TBC1D10CQ8IV04 446 aa11.68□□□□□ -0.54
COL4A3-201ENST00000304990 SPDYE1Q8NFV5 336 aaPredicted RBP11.68□□□□□ -0.54
COL4A3-201ENST00000304990 IL31RAQ8NI17 732 aa11.68□□□□□ -0.54
COL4A3-201ENST00000304990 OTUD7AQ8TE49 926 aaPredicted RBP11.68□□□□□ -0.54
COL4A3-201ENST00000304990 SUPT16HQ9Y5B9 1047 aaKnown RBP11.68□□□□□ -0.54
COL4A3-201ENST00000304990 PCDHA1Q9Y5I3 950 aa11.68□□□□□ -0.54
COL4A3-201ENST00000304990 TTC3P53804 2025 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 NEDD4P46934 1319 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 LOXHD1Q8IVV2 1947 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 M0QZ92 97 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 ZNF213O14771 459 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 GLP2RO95838 553 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 PDGFBP01127 241 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms