RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 ADAM9Q13443 819 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 GIT2Q14161 759 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 CTTNQ14247 550 aaKnown RBP20.62■□□□□ 0.89
RNF139-201ENST00000303545 SLC15A2Q16348 729 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 GLIS2Q9BZE0 524 aaPredicted RBP20.62■□□□□ 0.89
RNF139-201ENST00000303545 BHMT2Q9H2M3 363 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 JADE2Q9NQC1 790 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 DNM3Q9UQ16 869 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 PCDHA13Q9Y5I0 950 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 SAR1BQ9Y6B6 198 aa20.62■□□□□ 0.89
RNF139-201ENST00000303545 PRPF6O94906 941 aaKnown RBP20.61■□□□□ 0.89
RNF139-201ENST00000303545 MYBP10242 640 aa20.61■□□□□ 0.89
RNF139-201ENST00000303545 TDRD12Q587J7 1177 aaKnown RBP20.61■□□□□ 0.89
RNF139-201ENST00000303545 HAUS3Q68CZ6 603 aa20.61■□□□□ 0.89
RNF139-201ENST00000303545 KCTD10Q9H3F6 313 aa20.61■□□□□ 0.89
RNF139-201ENST00000303545 TMOD2Q9NZR1 351 aa20.61■□□□□ 0.89
RNF139-201ENST00000303545 CAPN6Q9Y6Q1 641 aa20.61■□□□□ 0.89
RNF139-201ENST00000303545 SPDYE2BA6NHP3 402 aa20.61■□□□□ 0.89
RNF139-201ENST00000303545 SPDYE6P0CI01 402 aa20.61■□□□□ 0.89
RNF139-201ENST00000303545 HMGB2P26583 209 aaKnown RBP20.61■□□□□ 0.89
RNF139-201ENST00000303545 VAV2P52735 878 aa20.61■□□□□ 0.89
RNF139-201ENST00000303545 POLR2FP61218 127 aaKnown RBP20.61■□□□□ 0.89
RNF139-201ENST00000303545 ZNF772Q68DY9 489 aaPredicted RBP20.61■□□□□ 0.89
RNF139-201ENST00000303545 FUT8Q9BYC5 575 aa20.61■□□□□ 0.89
RNF139-201ENST00000303545 ABCB6Q9NP58 842 aa20.61■□□□□ 0.89
RNF139-201ENST00000303545 ZNF70Q9UC06 446 aaPredicted RBP20.61■□□□□ 0.89
RNF139-201ENST00000303545 ATRNL1Q5VV63 1379 aa20.61■□□□□ 0.89
RNF139-201ENST00000303545 MYH10P35580 1976 aa20.6■□□□□ 0.89
RNF139-201ENST00000303545 POLD1P28340 1107 aa20.6■□□□□ 0.89
RNF139-201ENST00000303545 DLGAP5Q15398 846 aa20.6■□□□□ 0.89
RNF139-201ENST00000303545 Q4G0T1 1027 aa20.6■□□□□ 0.89
RNF139-201ENST00000303545 LARGE2Q8N3Y3 721 aa20.6■□□□□ 0.89
RNF139-201ENST00000303545 SECISBP2LQ93073 1101 aaKnown RBP20.6■□□□□ 0.89
RNF139-201ENST00000303545 RUSC1Q9BVN2 902 aa20.6■□□□□ 0.89
RNF139-201ENST00000303545 FBXO28Q9NVF7 368 aa20.6■□□□□ 0.89
RNF139-201ENST00000303545 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.6■□□□□ 0.89
RNF139-201ENST00000303545 KCNA1Q09470 495 aa20.6■□□□□ 0.89
RNF139-201ENST00000303545 TERF2Q15554 542 aa20.6■□□□□ 0.89
RNF139-201ENST00000303545 ERMNQ8TAM6 284 aa20.6■□□□□ 0.89
RNF139-201ENST00000303545 WDR18Q9BV38 432 aa20.6■□□□□ 0.89
RNF139-201ENST00000303545 ZMYND10O75800 440 aa20.59■□□□□ 0.89
RNF139-201ENST00000303545 NOL4O94818 638 aa20.59■□□□□ 0.89
RNF139-201ENST00000303545 PDXDC1Q6P996 788 aa20.59■□□□□ 0.89
RNF139-201ENST00000303545 EIF2AK1Q9BQI3 630 aaKnown RBP20.59■□□□□ 0.89
RNF139-201ENST00000303545 VAV3Q9UKW4 847 aa20.59■□□□□ 0.89
RNF139-201ENST00000303545 NPM3O75607 178 aaKnown RBP20.59■□□□□ 0.89
RNF139-201ENST00000303545 NR2F2P24468 414 aa20.59■□□□□ 0.89
RNF139-201ENST00000303545 RPA1P27694 616 aa20.59■□□□□ 0.89
RNF139-201ENST00000303545 RXRBP28702 533 aa20.59■□□□□ 0.89
RNF139-201ENST00000303545 TUBB2AQ13885 445 aa20.59■□□□□ 0.89
RNF139-201ENST00000303545 RSBN1LQ6PCB5 846 aaPredicted RBP20.59■□□□□ 0.89
RNF139-201ENST00000303545 TPH2Q8IWU9 490 aa20.59■□□□□ 0.89
RNF139-201ENST00000303545 CAGE1Q8TC20 777 aa20.59■□□□□ 0.89
RNF139-201ENST00000303545 TUBB2BQ9BVA1 445 aa20.59■□□□□ 0.89
RNF139-201ENST00000303545 ARHGEF10LQ9HCE6 1279 aa20.59■□□□□ 0.89
RNF139-201ENST00000303545 SALL4Q9UJQ4 1053 aa20.59■□□□□ 0.89
RNF139-201ENST00000303545 ACTN1P12814 892 aa20.58■□□□□ 0.89
RNF139-201ENST00000303545 GYS2P54840 703 aa20.58■□□□□ 0.89
RNF139-201ENST00000303545 RASSF7Q02833 373 aa20.58■□□□□ 0.89
RNF139-201ENST00000303545 GABPB1Q06547 395 aaPredicted RBP20.58■□□□□ 0.89
RNF139-201ENST00000303545 CCDC151A5D8V7 595 aa20.58■□□□□ 0.89
RNF139-201ENST00000303545 PDE2AO00408 941 aaPredicted RBP20.58■□□□□ 0.89
RNF139-201ENST00000303545 CLIC2O15247 247 aa20.58■□□□□ 0.89
RNF139-201ENST00000303545 BUB1O43683 1085 aa20.58■□□□□ 0.89
RNF139-201ENST00000303545 CXCR5P32302 372 aa20.58■□□□□ 0.89
RNF139-201ENST00000303545 HOXD13P35453 343 aa20.58■□□□□ 0.89
RNF139-201ENST00000303545 MRPS25P82663 173 aaKnown RBP20.58■□□□□ 0.89
RNF139-201ENST00000303545 KSR1Q8IVT5 923 aa20.58■□□□□ 0.89
RNF139-201ENST00000303545 SMARCAL1Q9NZC9 954 aa20.58■□□□□ 0.89
RNF139-201ENST00000303545 PKD2L1Q9P0L9 805 aa20.58■□□□□ 0.89
RNF139-201ENST00000303545 ZBTB21Q9ULJ3 1066 aa20.58■□□□□ 0.89
RNF139-201ENST00000303545 SRCAPQ6ZRS2 3230 aa20.58■□□□□ 0.88
RNF139-201ENST00000303545 FOSP01100 380 aaPredicted RBP20.57■□□□□ 0.88
RNF139-201ENST00000303545 HNRNPH3P31942 346 aaKnown RBP20.57■□□□□ 0.88
RNF139-201ENST00000303545 EPS15P42566 896 aa20.57■□□□□ 0.88
RNF139-201ENST00000303545 CDK17Q00537 523 aa20.57■□□□□ 0.88
RNF139-201ENST00000303545 MOXD1Q6UVY6 613 aa20.57■□□□□ 0.88
RNF139-201ENST00000303545 BTNL9Q6UXG8 535 aa20.57■□□□□ 0.88
RNF139-201ENST00000303545 SYT2Q8N9I0 419 aaPredicted RBP20.57■□□□□ 0.88
RNF139-201ENST00000303545 MSANTD4Q8NCY6 345 aa20.57■□□□□ 0.88
RNF139-201ENST00000303545 SHTN1A0MZ66 631 aa20.57■□□□□ 0.88
RNF139-201ENST00000303545 NCK2O43639 380 aa20.57■□□□□ 0.88
RNF139-201ENST00000303545 TLR2O60603 784 aa20.57■□□□□ 0.88
RNF139-201ENST00000303545 OAS2P29728 719 aaKnown RBP20.57■□□□□ 0.88
RNF139-201ENST00000303545 MAGEA1P43355 309 aa20.57■□□□□ 0.88
RNF139-201ENST00000303545 SMC1AQ14683 1233 aaKnown RBP20.57■□□□□ 0.88
RNF139-201ENST00000303545 BRD3Q15059 726 aa20.57■□□□□ 0.88
RNF139-201ENST00000303545 PAPD7Q5XG87 772 aaKnown RBP20.57■□□□□ 0.88
RNF139-201ENST00000303545 TRIM59Q8IWR1 403 aa20.57■□□□□ 0.88
RNF139-201ENST00000303545 ABCB11O95342 1321 aa20.57■□□□□ 0.88
RNF139-201ENST00000303545 COL4A5P29400 1685 aa20.57■□□□□ 0.88
RNF139-201ENST00000303545 DNA2P51530 1060 aa20.57■□□□□ 0.88
RNF139-201ENST00000303545 C2orf54Q08AI8 447 aa20.57■□□□□ 0.88
RNF139-201ENST00000303545 RAPGEF1Q13905 1077 aa20.57■□□□□ 0.88
RNF139-201ENST00000303545 BEND6Q5SZJ8 279 aaPredicted RBP20.57■□□□□ 0.88
RNF139-201ENST00000303545 HGSNATQ68CP4 663 aa20.57■□□□□ 0.88
RNF139-201ENST00000303545 DYDC2Q96IM9 177 aa20.57■□□□□ 0.88
RNF139-201ENST00000303545 EHD2Q9NZN4 543 aa20.57■□□□□ 0.88
RNF139-201ENST00000303545 CNTNAP1P78357 1384 aa20.56■□□□□ 0.88
RNF139-201ENST00000303545 FAM170AA1A519 330 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms