RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 CNGA1P29973 690 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 BASP1P80723 227 aaKnown RBP15.07■□□□□ 0
PRKCB-201ENST00000303531 EXOC4Q96A65 974 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 LUC7L3O95232 432 aaKnown RBP15.07■□□□□ 0
PRKCB-201ENST00000303531 USP14P54578 494 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 SLMAPQ14BN4 828 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 SUSD4Q5VX71 490 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 ALS2CLQ60I27 953 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 TBC1D10CQ8IV04 446 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 RPS6KC1Q96S38 1066 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 ADAMTS1Q9UHI8 967 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 CCND2P30279 289 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 HOXA13P31271 388 aaPredicted RBP15.07■□□□□ 0
PRKCB-201ENST00000303531 NEK9Q8TD19 979 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 TRIM56Q9BRZ2 755 aaKnown RBP15.07■□□□□ 0
PRKCB-201ENST00000303531 CNOT10Q9H9A5 744 aaKnown RBP15.07■□□□□ 0
PRKCB-201ENST00000303531 PIGBQ92521 554 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 FMO2Q99518 471 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 JPH2Q9BR39 696 aaPredicted RBP15.07■□□□□ 0
PRKCB-201ENST00000303531 NXF1Q9UBU9 619 aaKnown RBP15.07■□□□□ 0
PRKCB-201ENST00000303531 NEDD4P46934 1319 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 CTTNQ14247 550 aaKnown RBP15.07■□□□□ 0
PRKCB-201ENST00000303531 MUM1L1Q5H9M0 696 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 CCNYQ8ND76 341 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 PI4KBQ9UBF8 816 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 NR1D1P20393 614 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 FAM133BQ5BKY9 247 aaKnown RBP15.07■□□□□ 0
PRKCB-201ENST00000303531 EPHA10Q5JZY3 1008 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 TMTC3Q6ZXV5 915 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 GOLPH3LQ9H4A5 285 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 CACYBPQ9HB71 228 aaKnown RBP15.07■□□□□ 0
PRKCB-201ENST00000303531 NUB1Q9Y5A7 615 aa15.07■□□□□ 0
PRKCB-201ENST00000303531 PPP1R2P3Q6NXS1 205 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 C4orf50Q6ZRC1 276 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 CALN1Q9BXU9 219 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 SH3GLB2Q9NR46 395 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 XPOTO43592 962 aaKnown RBP15.06■□□□□ 0
PRKCB-201ENST00000303531 HOXA7P31268 230 aaPredicted RBP15.06■□□□□ 0
PRKCB-201ENST00000303531 IFT122Q9HBG6 1241 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 RNASELQ05823 741 aaKnown RBP15.06■□□□□ 0
PRKCB-201ENST00000303531 MTERF2Q49AM1 385 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 ALKBH5Q6P6C2 394 aaKnown RBP15.06■□□□□ 0
PRKCB-201ENST00000303531 DARS2Q6PI48 645 aaKnown RBP15.06■□□□□ 0
PRKCB-201ENST00000303531 PPP4R3CPQ6ZMV5 832 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 FRMD3A2A2Y4 597 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 RASGRF2O14827 1237 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 PTPREP23469 700 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 ZBTB33Q86T24 672 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 TRIM42Q8IWZ5 723 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 MCUQ8NE86 351 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 BSDC1Q9NW68 430 aaPredicted RBP15.06■□□□□ 0
PRKCB-201ENST00000303531 WDR46O15213 610 aaKnown RBP15.06■□□□□ 0
PRKCB-201ENST00000303531 LPXNO60711 386 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 KCTD6Q8NC69 237 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 BRIP1Q9BX63 1249 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 NFU1Q9UMS0 254 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 SHROOM2Q13796 1616 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 CD58P19256 250 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 GDAP1Q8TB36 358 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 HVCN1Q96D96 273 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 LRGUKQ96M69 825 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 BHMT2Q9H2M3 363 aa15.06■□□□□ 0
PRKCB-201ENST00000303531 RPAP1Q9BWH6 1393 aaPredicted RBP15.05■□□□□ 0
PRKCB-201ENST00000303531 RPSAP08865 295 aaKnown RBP15.05■□□□□ 0
PRKCB-201ENST00000303531 PNMA6AP0CW24 399 aaPredicted RBP15.05■□□□□ 0
PRKCB-201ENST00000303531 SNAP25P60880 206 aa15.05■□□□□ 0
PRKCB-201ENST00000303531 SLC38A10Q9HBR0 1119 aa15.05■□□□□ 0
PRKCB-201ENST00000303531 CASP1P29466 404 aa15.05■□□□□ 0
PRKCB-201ENST00000303531 KLHL29Q96CT2 875 aa15.05■□□□□ 0
PRKCB-201ENST00000303531 LRRD1A4D1F6 860 aa15.05■□□□□ -0
PRKCB-201ENST00000303531 MED7O43513 233 aa15.05■□□□□ -0
PRKCB-201ENST00000303531 MRPS25P82663 173 aaKnown RBP15.05■□□□□ -0
PRKCB-201ENST00000303531 E2F5Q15329 346 aa15.05■□□□□ -0
PRKCB-201ENST00000303531 DGKHQ86XP1 1220 aa15.05■□□□□ -0
PRKCB-201ENST00000303531 ZMYND12Q9H0C1 365 aa15.05■□□□□ -0
PRKCB-201ENST00000303531 GOLGA8IPA6NC78 632 aa15.05■□□□□ -0
PRKCB-201ENST00000303531 GOLGA8JA6NMD2 632 aa15.05■□□□□ -0
PRKCB-201ENST00000303531 CCHCR1Q8TD31 782 aa15.05■□□□□ -0
PRKCB-201ENST00000303531 SNX25Q9H3E2 840 aa15.05■□□□□ -0
PRKCB-201ENST00000303531 MT-ND3P03897 115 aa15.05■□□□□ -0
PRKCB-201ENST00000303531 SRGAP2BP0DMP2 458 aa15.05■□□□□ -0
PRKCB-201ENST00000303531 CYB5R4Q7L1T6 521 aa15.05■□□□□ -0
PRKCB-201ENST00000303531 ARMC9Q7Z3E5 817 aa15.05■□□□□ -0
PRKCB-201ENST00000303531 CDHR1Q96JP9 859 aa15.05■□□□□ -0
PRKCB-201ENST00000303531 EXOC1LA0A1B0GW35 172 aa15.05■□□□□ -0
PRKCB-201ENST00000303531 TRIM49BA6NDI0 452 aa15.05■□□□□ -0
PRKCB-201ENST00000303531 IGKV5-2P06315 115 aa15.05■□□□□ -0
PRKCB-201ENST00000303531 ADD3Q9UEY8 706 aaKnown RBP15.05■□□□□ -0
PRKCB-201ENST00000303531 MAGED2Q9UNF1 606 aaPredicted RBP15.05■□□□□ -0
PRKCB-201ENST00000303531 DNAAF3Q8N9W5 541 aa15.04■□□□□ -0
PRKCB-201ENST00000303531 ARHGAP27Q6ZUM4 889 aa15.04■□□□□ -0
PRKCB-201ENST00000303531 GPR101Q96P66 508 aaPredicted RBP15.04■□□□□ -0
PRKCB-201ENST00000303531 OSTNP61366 133 aa15.04■□□□□ -0
PRKCB-201ENST00000303531 DPP9Q86TI2 863 aa15.04■□□□□ -0
PRKCB-201ENST00000303531 ABHD10Q9NUJ1 306 aa15.04■□□□□ -0
PRKCB-201ENST00000303531 SFI1A8K8P3 1242 aa15.04■□□□□ -0
PRKCB-201ENST00000303531 COG7P83436 770 aa15.04■□□□□ -0
PRKCB-201ENST00000303531 SKA2Q8WVK7 121 aaPredicted RBP15.04■□□□□ -0
PRKCB-201ENST00000303531 ABCD1P33897 745 aa15.04■□□□□ -0
PRKCB-201ENST00000303531 BIRC2Q13490 618 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms