RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 CCDC51Q96ER9 411 aa11.78□□□□□ -0.52
CLP1-201ENST00000302731 WNK4Q96J92 1243 aa11.78□□□□□ -0.52
CLP1-201ENST00000302731 PANX2Q96RD6 677 aa11.78□□□□□ -0.52
CLP1-201ENST00000302731 NACC1Q96RE7 527 aa11.78□□□□□ -0.52
CLP1-201ENST00000302731 UIMC1Q96RL1 719 aa11.78□□□□□ -0.52
CLP1-201ENST00000302731 RMDN3Q96TC7 470 aa11.78□□□□□ -0.52
CLP1-201ENST00000302731 TSG101Q99816 390 aa11.78□□□□□ -0.52
CLP1-201ENST00000302731 UNC45AQ9H3U1 944 aa11.78□□□□□ -0.52
CLP1-201ENST00000302731 ACAD9Q9H845 621 aa11.78□□□□□ -0.52
CLP1-201ENST00000302731 AGO4Q9HCK5 861 aaKnown RBP11.78□□□□□ -0.52
CLP1-201ENST00000302731 HOMER2Q9NSB8 354 aa11.78□□□□□ -0.52
CLP1-201ENST00000302731 OTOFQ9HC10 1997 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 PTPRFP10586 1907 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 LOXHD1Q8IVV2 1947 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 GLTPD2A6NH11 291 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 AKR1B15C9JRZ8 316 aaPredicted RBP11.77□□□□□ -0.53
CLP1-201ENST00000302731 DHX15O43143 795 aaKnown RBP11.77□□□□□ -0.53
CLP1-201ENST00000302731 ARHGAP6O43182 974 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 COBLO75128 1261 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 STAM2O75886 525 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 TPM1P09493 284 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 DNM2P50570 870 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 CYP4A11Q02928 519 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 PABPC4Q13310 644 aaKnown RBP eCLIP11.77□□□□□ -0.53
CLP1-201ENST00000302731 MTMR1Q13613 665 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 BAATQ14032 418 aaPredicted RBP11.77□□□□□ -0.53
CLP1-201ENST00000302731 ZCWPW2Q504Y3 356 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 HERC4Q5GLZ8 1057 aaPredicted RBP11.77□□□□□ -0.53
CLP1-201ENST00000302731 ARHGEF16Q5VV41 709 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 NSMFQ6X4W1 530 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 PPFIBP1Q86W92 1011 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 CNGA4Q8IV77 575 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 CHST13Q8NET6 341 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 ZNF507Q8TCN5 953 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 HPS3Q969F9 1004 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 DYDC2Q96IM9 177 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 NAA15Q9BXJ9 866 aaKnown RBP11.77□□□□□ -0.53
CLP1-201ENST00000302731 BHMT2Q9H2M3 363 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 TAB2Q9NYJ8 693 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 RGL1Q9NZL6 768 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 RIPK3Q9Y572 518 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 COL11A1P12107 1806 aaPredicted RBP11.77□□□□□ -0.53
CLP1-201ENST00000302731 SCN4AP35499 1836 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 LOC285556D6RIA3 1793 aa11.77□□□□□ -0.53
CLP1-201ENST00000302731 A0A0G2JLL6 359 aaPredicted RBP11.76□□□□□ -0.53
CLP1-201ENST00000302731 IQCA1LA6NCM1 817 aa11.76□□□□□ -0.53
CLP1-201ENST00000302731 SPDYE5A6NIY4 337 aa11.76□□□□□ -0.53
CLP1-201ENST00000302731 LYPLA2O95372 231 aa11.76□□□□□ -0.53
CLP1-201ENST00000302731 GAP43P17677 238 aa11.76□□□□□ -0.53
CLP1-201ENST00000302731 EIF2AK2P19525 551 aaKnown RBP11.76□□□□□ -0.53
CLP1-201ENST00000302731 CCND2P30279 289 aa11.76□□□□□ -0.53
CLP1-201ENST00000302731 FKBP3Q00688 224 aaKnown RBP11.76□□□□□ -0.53
CLP1-201ENST00000302731 PRKG1Q13976 671 aa11.76□□□□□ -0.53
CLP1-201ENST00000302731 LBX2Q6XYB7 198 aa11.76□□□□□ -0.53
CLP1-201ENST00000302731 PRRT2Q7Z6L0 340 aaPredicted RBP11.76□□□□□ -0.53
CLP1-201ENST00000302731 VSIG10LQ86VR7 867 aa11.76□□□□□ -0.53
CLP1-201ENST00000302731 TPH2Q8IWU9 490 aa11.76□□□□□ -0.53
CLP1-201ENST00000302731 CCAR2Q8N163 923 aaKnown RBP11.76□□□□□ -0.53
CLP1-201ENST00000302731 RDM1Q8NG50 284 aa11.76□□□□□ -0.53
CLP1-201ENST00000302731 NSUN6Q8TEA1 469 aaKnown RBP11.76□□□□□ -0.53
CLP1-201ENST00000302731 GPRASP2Q96D09 838 aa11.76□□□□□ -0.53
CLP1-201ENST00000302731 IQCDQ96DY2 449 aa11.76□□□□□ -0.53
CLP1-201ENST00000302731 CDCA5Q96FF9 252 aa11.76□□□□□ -0.53
CLP1-201ENST00000302731 CNOT6LQ96LI5 555 aaKnown RBP11.76□□□□□ -0.53
CLP1-201ENST00000302731 REEP2Q9BRK0 252 aa11.76□□□□□ -0.53
CLP1-201ENST00000302731 TUBGCP2Q9BSJ2 902 aa11.76□□□□□ -0.53
CLP1-201ENST00000302731 VPS16Q9H269 839 aa11.76□□□□□ -0.53
CLP1-201ENST00000302731 OLFML3Q9NRN5 406 aa11.76□□□□□ -0.53
CLP1-201ENST00000302731 COL4A3BPQ9Y5P4 624 aa11.76□□□□□ -0.53
CLP1-201ENST00000302731 A0A0G2JMZ2 1700 aa11.76□□□□□ -0.53
CLP1-201ENST00000302731 UNCXA6NJT0 531 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 IRF6O14896 467 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 CHMP2AO43633 222 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 GRIN3BO60391 1043 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 GNA14O95837 355 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 TUBB4AP04350 444 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 P4HBP07237 508 aaKnown RBP11.75□□□□□ -0.53
CLP1-201ENST00000302731 FECHP22830 423 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 SFNP31947 248 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 JAK3P52333 1124 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 UBXN1Q04323 297 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 CTTNQ14247 550 aaKnown RBP11.75□□□□□ -0.53
CLP1-201ENST00000302731 BMT2Q1RMZ1 405 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 EDRF1Q3B7T1 1238 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 DNTTIP2Q5QJE6 756 aaKnown RBP11.75□□□□□ -0.53
CLP1-201ENST00000302731 RINT1Q6NUQ1 792 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 LRRC55Q6ZSA7 311 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 C1orf186Q6ZWK4 172 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 MIER3Q7Z3K6 550 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 NLRX1Q86UT6 975 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 TMEM139Q8IV31 216 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 ZC3H3Q8IXZ2 948 aaKnown RBP11.75□□□□□ -0.53
CLP1-201ENST00000302731 RETREG2Q8NC44 543 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 CDHR1Q96JP9 859 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 CEP63Q96MT8 703 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 INPP4AQ96PE3 977 aaPredicted RBP11.75□□□□□ -0.53
CLP1-201ENST00000302731 BAG1Q99933 345 aaPredicted RBP11.75□□□□□ -0.53
CLP1-201ENST00000302731 CYP39A1Q9NYL5 469 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 SEL1LQ9UBV2 794 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 FBXO40Q9UH90 709 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms