RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 MESDQ14696 234 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 C16orf87Q6PH81 154 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 MAEAQ7L5Y9 396 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 DEPDC1BQ8WUY9 529 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 GRAMD1AQ96CP6 724 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 SAAL1Q96ER3 474 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 TFCP2L1Q9NZI6 479 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 SH2B2O14492 632 aaPredicted RBP8.23□□□□□ -1.09
SF3B3-201ENST00000302516 EIF4A3P38919 411 aaKnown RBP8.23□□□□□ -1.09
SF3B3-201ENST00000302516 LIFRP42702 1097 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 VPS41P49754 854 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 ZNF827Q17R98 1081 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 NRBP1Q9UHY1 535 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 BTBD18B2RXH4 712 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 ENC1O14682 589 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 GFAPP14136 432 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 PPARGP37231 505 aaPredicted RBP8.23□□□□□ -1.09
SF3B3-201ENST00000302516 GRAMD4Q6IC98 578 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 GAS2L3Q86XJ1 694 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 GLG1Q92896 1179 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 AMNQ9BXJ7 453 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.23□□□□□ -1.09
SF3B3-201ENST00000302516 CCNL1Q9UK58 526 aaPredicted RBP8.23□□□□□ -1.09
SF3B3-201ENST00000302516 TLR3O15455 904 aaKnown RBP8.23□□□□□ -1.09
SF3B3-201ENST00000302516 HDAC4P56524 1084 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 PLA2G4DQ86XP0 818 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 STAMQ92783 540 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 RBM41Q96IZ5 413 aaKnown RBP8.23□□□□□ -1.09
SF3B3-201ENST00000302516 TLK1Q9UKI8 766 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 CCDC17Q96LX7 622 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 CLIC6Q96NY7 704 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 CCNE1P24864 410 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 MYO1EQ12965 1108 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 SNX1Q13596 522 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 TAF1BQ53T94 588 aaPredicted RBP8.23□□□□□ -1.09
SF3B3-201ENST00000302516 KAZNQ674X7 775 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 GPKOWQ92917 476 aaPredicted RBP eCLIP8.23□□□□□ -1.091e-6■■□□□ 13.4
SF3B3-201ENST00000302516 VIPAS39Q9H9C1 493 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 PPCSQ9HAB8 311 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 NRBP2Q9NSY0 501 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 JAG2Q9Y219 1238 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 ARL4CP56559 192 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 OCA2Q04671 838 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 SH3GL3Q99963 347 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 TEX12Q9BXU0 123 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 GCOM2Q9BZD3 368 aaPredicted RBP8.23□□□□□ -1.09
SF3B3-201ENST00000302516 LRRIQ1Q96JM4 1722 aa8.23□□□□□ -1.09
SF3B3-201ENST00000302516 ESYT2A0FGR8 921 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 SERPINB10P48595 397 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 RWDD2BP57060 319 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 CDR2Q01850 454 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 IFRD2Q12894 506 aaPredicted RBP8.22□□□□□ -1.09
SF3B3-201ENST00000302516 PABPC4Q13310 644 aaKnown RBP eCLIP8.22□□□□□ -1.095e-11■□□□□ 9.2
SF3B3-201ENST00000302516 IQCB1Q15051 598 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 CC2D1AQ6P1N0 951 aaPredicted RBP8.22□□□□□ -1.09
SF3B3-201ENST00000302516 CLEC17AQ6ZS10 378 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 ACRBPQ8NEB7 543 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 ZFP69BQ9UJL9 534 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 M0R2C6 588 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 KRT38O76015 456 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 MOCS3O95396 460 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 EEF1B2P24534 225 aaKnown RBP8.22□□□□□ -1.09
SF3B3-201ENST00000302516 ABHD10Q9NUJ1 306 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 RPSAP08865 295 aaKnown RBP8.22□□□□□ -1.09
SF3B3-201ENST00000302516 ARL4AP40617 200 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 KRT31Q15323 416 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 SCYL2Q6P3W7 929 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 LRRC37BQ96QE4 947 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 PLEKHF1Q96S99 279 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 KLC2Q9H0B6 622 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 ABCB6Q9NP58 842 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 SENP1Q9P0U3 644 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 TEKT2Q9UIF3 430 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 ADAM21Q9UKJ8 722 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 PCDHA1Q9Y5I3 950 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 LGALS16A8MUM7 142 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 MYBL1P10243 752 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 ANXA13P27216 316 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 ICA1Q05084 483 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 MIS18BP1Q6P0N0 1132 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 METTL13Q8N6R0 699 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 TEX9Q8N6V9 391 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 SYT2Q8N9I0 419 aaPredicted RBP8.22□□□□□ -1.09
SF3B3-201ENST00000302516 MMS19Q96T76 1030 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 PLEKHA4Q9H4M7 779 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 PARVGQ9HBI0 331 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 SPC25Q9HBM1 224 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 TOM1O60784 492 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 RESTQ13127 1097 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 FBXL13Q8NEE6 735 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 CEP19Q96LK0 163 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 POLR3CQ9BUI4 534 aaPredicted RBP8.22□□□□□ -1.09
SF3B3-201ENST00000302516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.22□□□□□ -1.095e-7■□□□□ 10.7
SF3B3-201ENST00000302516 MORC2Q9Y6X9 1032 aaPredicted RBP8.22□□□□□ -1.09
SF3B3-201ENST00000302516 TARBP1Q13395 1621 aaKnown RBP8.22□□□□□ -1.09
SF3B3-201ENST00000302516 PPP2R2AP63151 447 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 FAM47AQ5JRC9 791 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 PPP1R18Q6NYC8 613 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 KIRREL3Q8IZU9 778 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 FAM133AQ8N9E0 248 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms