RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 MCMDC2Q4G0Z9 681 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 NPAS4Q8IUM7 802 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 RNPEPQ9H4A4 650 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 NEDD4P46934 1319 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 ENPP3O14638 875 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 LINC01565O15544 149 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 TRAF1Q13077 416 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 LPIN1Q14693 890 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 TSHZ3Q63HK5 1081 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 TSHZ1Q6ZSZ6 1077 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 IFIH1Q9BYX4 1025 aaKnown RBP7.54□□□□□ -1.2
ITGB1-201ENST00000302278 LZTS1Q9Y250 596 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 WDFY4Q6ZS81 3184 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 PATJQ8NI35 1801 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 GGPS1O95749 300 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 CCND2P30279 289 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 RRP1P56182 461 aaKnown RBP7.54□□□□□ -1.2
ITGB1-201ENST00000302278 PNMA1Q8ND90 353 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 ESR2Q92731 530 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 UIMC1Q96RL1 719 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 AMNQ9BXJ7 453 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 FTHL17Q9BXU8 183 aa7.54□□□□□ -1.2
ITGB1-201ENST00000302278 PIK3CDO00329 1044 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 ITGB1P05556 798 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 AVPR2P30518 371 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 DUSP6Q16828 381 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 USH1GQ495M9 461 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 FBXO47Q5MNV8 452 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 TEX2Q8IWB9 1127 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 LMBR1Q8WVP7 490 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 PBXIP1Q96AQ6 731 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 RIOX1Q9H6W3 641 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 PALM3A6NDB9 673 aaPredicted RBP7.53□□□□□ -1.2
ITGB1-201ENST00000302278 PRR23AA6NEV1 266 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 GFRA3O60609 400 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 NEDD9Q14511 834 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 MFSD6Q6ZSS7 791 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 SUGP1Q8IWZ8 645 aaKnown RBP7.53□□□□□ -1.2
ITGB1-201ENST00000302278 PPP2R3CQ969Q6 453 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 USP15Q9Y4E8 981 aaPredicted RBP7.53□□□□□ -1.2
ITGB1-201ENST00000302278 MRPL42Q9Y6G3 142 aaKnown RBP7.53□□□□□ -1.2
ITGB1-201ENST00000302278 A0A0D9SFI3 127 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 ZBTB5O15062 677 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 PAPLNO95428 1278 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 EIF2AK2P19525 551 aaKnown RBP7.53□□□□□ -1.2
ITGB1-201ENST00000302278 VCPP55072 806 aaKnown RBP7.53□□□□□ -1.2
ITGB1-201ENST00000302278 SEC23AQ15436 765 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 MARCH8Q5T0T0 291 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 ADGRD2Q7Z7M1 963 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 GIMAP8Q8ND71 665 aaPredicted RBP7.53□□□□□ -1.2
ITGB1-201ENST00000302278 IL31RAQ8NI17 732 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 MAD2L2Q9UI95 211 aa7.53□□□□□ -1.2
ITGB1-201ENST00000302278 FIBPO43427 364 aa7.52□□□□□ -1.21
ITGB1-201ENST00000302278 MRPS9P82933 396 aaKnown RBP7.52□□□□□ -1.21
ITGB1-201ENST00000302278 UBALD2Q8IYN6 164 aa7.52□□□□□ -1.21
ITGB1-201ENST00000302278 ENAHQ8N8S7 591 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-201ENST00000302278 VN1R2Q8NFZ6 395 aa7.52□□□□□ -1.21
ITGB1-201ENST00000302278 RIPOR3Q96MK2 946 aa7.52□□□□□ -1.21
ITGB1-201ENST00000302278 ZSCAN10Q96SZ4 725 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-201ENST00000302278 ZNF215Q9UL58 517 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-201ENST00000302278 ISY1Q9ULR0 285 aaKnown RBP7.52□□□□□ -1.21
ITGB1-201ENST00000302278 SLC35G1Q2M3R5 365 aa7.52□□□□□ -1.21
ITGB1-201ENST00000302278 PCNX4Q63HM2 1172 aa7.52□□□□□ -1.21
ITGB1-201ENST00000302278 FAM117BQ6P1L5 589 aa7.52□□□□□ -1.21
ITGB1-201ENST00000302278 OTUD7AQ8TE49 926 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-201ENST00000302278 GTF2F1P35269 517 aaKnown RBP eCLIP7.52□□□□□ -1.211e-12■■■■■ 49.4
ITGB1-201ENST00000302278 MCTP2Q6DN12 878 aa7.52□□□□□ -1.21
ITGB1-201ENST00000302278 RTN4RL1Q86UN2 441 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-201ENST00000302278 ZNF589Q86UQ0 364 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-201ENST00000302278 MIER1Q8N108 512 aa7.52□□□□□ -1.21
ITGB1-201ENST00000302278 UBA5Q9GZZ9 404 aa7.52□□□□□ -1.21
ITGB1-201ENST00000302278 RNF216Q9NWF9 866 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-201ENST00000302278 IGSF9BQ9UPX0 1349 aa7.51□□□□□ -1.21
ITGB1-201ENST00000302278 PARP1P09874 1014 aaKnown RBP7.51□□□□□ -1.21
ITGB1-201ENST00000302278 SMARCA1P28370 1054 aa7.51□□□□□ -1.21
ITGB1-201ENST00000302278 MFAP1P55081 439 aaKnown RBP7.51□□□□□ -1.21
ITGB1-201ENST00000302278 RUFY4Q6ZNE9 571 aa7.51□□□□□ -1.21
ITGB1-201ENST00000302278 MAP3K14Q99558 947 aa7.51□□□□□ -1.21
ITGB1-201ENST00000302278 GOLGA8HP0CJ92 632 aa7.51□□□□□ -1.21
ITGB1-201ENST00000302278 HNRNPUQ00839 825 aaKnown RBP eCLIP7.51□□□□□ -1.21
ITGB1-201ENST00000302278 PLCB3Q01970 1234 aa7.51□□□□□ -1.21
ITGB1-201ENST00000302278 GNPTABQ3T906 1256 aa7.51□□□□□ -1.21
ITGB1-201ENST00000302278 C20orf194Q5TEA3 1177 aa7.51□□□□□ -1.21
ITGB1-201ENST00000302278 GPKOWQ92917 476 aaPredicted RBP eCLIP7.51□□□□□ -1.212e-6■■■■□ 21.7
ITGB1-201ENST00000302278 DSCC1Q9BVC3 393 aa7.51□□□□□ -1.21
ITGB1-201ENST00000302278 OSBPL3Q9H4L5 887 aa7.51□□□□□ -1.21
ITGB1-201ENST00000302278 KAT14Q9H8E8 782 aa7.51□□□□□ -1.21
ITGB1-201ENST00000302278 C2orf16Q68DN1 1984 aa7.51□□□□□ -1.21
ITGB1-201ENST00000302278 GRM4Q14833 912 aa7.51□□□□□ -1.21
ITGB1-201ENST00000302278 ANKRD54Q6NXT1 300 aa7.51□□□□□ -1.21
ITGB1-201ENST00000302278 ZDHHC14Q8IZN3 488 aa7.51□□□□□ -1.21
ITGB1-201ENST00000302278 GPRASP2Q96D09 838 aa7.51□□□□□ -1.21
ITGB1-201ENST00000302278 FAM227BQ96M60 508 aa7.51□□□□□ -1.21
ITGB1-201ENST00000302278 ELAC1Q9H777 363 aaKnown RBP7.51□□□□□ -1.21
ITGB1-201ENST00000302278 SETD4Q9NVD3 440 aa7.51□□□□□ -1.21
ITGB1-201ENST00000302278 TRIOO75962 3097 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 KCNA2P16389 499 aa7.5□□□□□ -1.21
ITGB1-201ENST00000302278 SARSP49591 514 aaKnown RBP7.5□□□□□ -1.21
ITGB1-201ENST00000302278 MRPS6P82932 125 aaKnown RBP7.5□□□□□ -1.21
ITGB1-201ENST00000302278 CHST3Q7LGC8 479 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms