RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 PFKFB3Q16875 520 aaPredicted RBP13.22□□□□□ -0.29
PDGFD-201ENST00000302251 HHATQ5VTY9 493 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 SLF2Q8IX21 1173 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 PHF20Q9BVI0 1012 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 EMILIN3Q9NT22 766 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 TMEM260Q9NX78 707 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 MYH15Q9Y2K3 1946 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 POC1B-GALNT4F8VUJ3 575 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 THAP12O43422 761 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 SKAP2O75563 359 aaPredicted RBP13.22□□□□□ -0.29
PDGFD-201ENST00000302251 SLC20A2Q08357 652 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 SUSD4Q5VX71 490 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 TPTE2Q6XPS3 522 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 CCDC13Q8IYE1 715 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 NEK9Q8TD19 979 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 TRIM9Q9C026 710 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 ZMYND12Q9H0C1 365 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 SH2D4AQ9H788 454 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 PLEKHG2Q9H7P9 1386 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 DDX60Q8IY21 1712 aaKnown RBP13.22□□□□□ -0.29
PDGFD-201ENST00000302251 ENO4A6NNW6 628 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 RAD51CO43502 376 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 PRPF6O94906 941 aaKnown RBP13.22□□□□□ -0.29
PDGFD-201ENST00000302251 TAF11Q15544 211 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 GLE1Q53GS7 698 aaKnown RBP13.22□□□□□ -0.29
PDGFD-201ENST00000302251 CDKAL1Q5VV42 579 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 EP400NLQ6ZTU2 488 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 PSMD1Q99460 953 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 SLC40A1Q9NP59 571 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 SPATS2LQ9NUQ6 558 aaKnown RBP13.22□□□□□ -0.29
PDGFD-201ENST00000302251 BCS1LQ9Y276 419 aa13.22□□□□□ -0.29
PDGFD-201ENST00000302251 RASGRF2O14827 1237 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 KLRC1P26715 233 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 ERFP50548 548 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 AP1ARQ63HQ0 302 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 HAUS3Q68CZ6 603 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 PSTPIP2Q9H939 334 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 VPS37BQ9H9H4 285 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 LAMA4Q16363 1823 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 SMIM22K7EJ46 135 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 GNA14O95837 355 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 GLI1P08151 1106 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 ATP5DP30049 168 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 DR1Q01658 176 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 TCP10Q12799 353 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 TNIP1Q15025 636 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 DDB1Q16531 1140 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 TSNAXIP1Q2TAA8 658 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 PARP10Q53GL7 1025 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 CYFIP2Q96F07 1278 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 ISCA1Q9BUE6 129 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 CELF4Q9BZC1 486 aaKnown RBP13.21□□□□□ -0.29
PDGFD-201ENST00000302251 FAM114A2Q9NRY5 505 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 HDAC9Q9UKV0 1011 aa13.21□□□□□ -0.29
PDGFD-201ENST00000302251 ATP2A1O14983 1001 aa13.21□□□□□ -0.3
PDGFD-201ENST00000302251 PDHA1P08559 390 aa13.21□□□□□ -0.3
PDGFD-201ENST00000302251 COPB2P35606 906 aa13.21□□□□□ -0.3
PDGFD-201ENST00000302251 SARSP49591 514 aaKnown RBP13.21□□□□□ -0.3
PDGFD-201ENST00000302251 AK8Q96MA6 479 aa13.21□□□□□ -0.3
PDGFD-201ENST00000302251 ADAM33Q9BZ11 813 aa13.21□□□□□ -0.3
PDGFD-201ENST00000302251 CUEDC2Q9H467 287 aa13.21□□□□□ -0.3
PDGFD-201ENST00000302251 FAM217BQ9NTX9 383 aaPredicted RBP13.21□□□□□ -0.3
PDGFD-201ENST00000302251 PNMA2Q9UL42 364 aa13.21□□□□□ -0.3
PDGFD-201ENST00000302251 TTI1O43156 1089 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 FAM153BP0C7A2 387 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 MECOMQ03112 1051 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 FAM153CQ494X1 144 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 TSEN2Q8NCE0 465 aaKnown RBP13.2□□□□□ -0.3
PDGFD-201ENST00000302251 MYCBPAPQ8TBZ2 947 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 CCDC127Q96BQ5 260 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 AZI2Q9H6S1 392 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 FAM153AQ9UHL3 310 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 PTGISQ16647 500 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 ZNF622Q969S3 477 aaKnown RBP eCLIP13.2□□□□□ -0.3
PDGFD-201ENST00000302251 TRIM51Q9BSJ1 452 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 NT5C3AQ9H0P0 336 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 HSD3B7Q9H2F3 369 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 WDR91A4D1P6 747 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 E9PMD0 336 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 ACTN1P12814 892 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 SCP2P22307 547 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 ALX1Q15699 326 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 GNPTABQ3T906 1256 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 DPH6Q7L8W6 267 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 ZNF804AQ7Z570 1209 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 PPM1KQ8N3J5 372 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 CCDC87Q9NVE4 849 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 GCNT4Q9P109 453 aa13.2□□□□□ -0.3
PDGFD-201ENST00000302251 PDHBP11177 359 aa13.19□□□□□ -0.3
PDGFD-201ENST00000302251 RFC4P35249 363 aa13.19□□□□□ -0.3
PDGFD-201ENST00000302251 MDM2Q00987 491 aaPredicted RBP13.19□□□□□ -0.3
PDGFD-201ENST00000302251 KCNH2Q12809 1159 aa13.19□□□□□ -0.3
PDGFD-201ENST00000302251 KIF2BQ8N4N8 673 aa13.19□□□□□ -0.3
PDGFD-201ENST00000302251 SEC16BQ96JE7 1060 aa13.19□□□□□ -0.3
PDGFD-201ENST00000302251 PBKQ96KB5 322 aa13.19□□□□□ -0.3
PDGFD-201ENST00000302251 RIC8AQ9NPQ8 531 aa13.19□□□□□ -0.3
PDGFD-201ENST00000302251 ATP8A2Q9NTI2 1148 aa13.19□□□□□ -0.3
PDGFD-201ENST00000302251 PKD1L3Q7Z443 1732 aa13.19□□□□□ -0.3
PDGFD-201ENST00000302251 CUL1Q13616 776 aa13.19□□□□□ -0.3
PDGFD-201ENST00000302251 PAPD7Q5XG87 772 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms