RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 CTTNQ14247 550 aaKnown RBP24.26■■□□□ 1.47
TPM4-201ENST00000300933 TSR1Q2NL82 804 aaKnown RBP24.26■■□□□ 1.47
TPM4-201ENST00000300933 VWA3BQ502W6 1294 aa24.26■■□□□ 1.47
TPM4-201ENST00000300933 AGBL1Q96MI9 1066 aa24.26■■□□□ 1.47
TPM4-201ENST00000300933 DNAJC7Q99615 494 aa24.26■■□□□ 1.47
TPM4-201ENST00000300933 TTYH3Q9C0H2 523 aa24.26■■□□□ 1.47
TPM4-201ENST00000300933 PKD2L1Q9P0L9 805 aa24.26■■□□□ 1.47
TPM4-201ENST00000300933 SLC12A3P55017 1021 aa24.26■■□□□ 1.47
TPM4-201ENST00000300933 SEMA3FQ13275 785 aa24.26■■□□□ 1.47
TPM4-201ENST00000300933 RASA3Q14644 834 aa24.26■■□□□ 1.47
TPM4-201ENST00000300933 HYIQ5T013 277 aa24.26■■□□□ 1.47
TPM4-201ENST00000300933 ZNF341Q9BYN7 854 aa24.26■■□□□ 1.47
TPM4-201ENST00000300933 VCPKMTQ9H867 229 aa24.26■■□□□ 1.47
TPM4-201ENST00000300933 FZD1Q9UP38 647 aa24.26■■□□□ 1.47
TPM4-201ENST00000300933 RRP15Q9Y3B9 282 aaKnown RBP24.26■■□□□ 1.47
TPM4-201ENST00000300933 INPP5BP32019 993 aa24.25■■□□□ 1.47
TPM4-201ENST00000300933 FKBP15Q5T1M5 1219 aa24.25■■□□□ 1.47
TPM4-201ENST00000300933 NAP1L4Q99733 375 aaKnown RBP24.25■■□□□ 1.47
TPM4-201ENST00000300933 BHMT2Q9H2M3 363 aa24.25■■□□□ 1.47
TPM4-201ENST00000300933 MYOZ2Q9NPC6 264 aa24.25■■□□□ 1.47
TPM4-201ENST00000300933 PIM2Q9P1W9 311 aa24.25■■□□□ 1.47
TPM4-201ENST00000300933 POLD1P28340 1107 aa24.25■■□□□ 1.47
TPM4-201ENST00000300933 ACTN2P35609 894 aa24.25■■□□□ 1.47
TPM4-201ENST00000300933 Q4G0T1 1027 aa24.25■■□□□ 1.47
TPM4-201ENST00000300933 SRLQ86TD4 932 aa24.25■■□□□ 1.47
TPM4-201ENST00000300933 CRACR2AQ9BSW2 395 aa24.25■■□□□ 1.47
TPM4-201ENST00000300933 FOSP01100 380 aaPredicted RBP24.24■■□□□ 1.47
TPM4-201ENST00000300933 SAMD7Q7Z3H4 446 aa24.24■■□□□ 1.47
TPM4-201ENST00000300933 CPXCR1Q8N123 301 aa24.24■■□□□ 1.47
TPM4-201ENST00000300933 SCFD1Q8WVM8 642 aa24.24■■□□□ 1.47
TPM4-201ENST00000300933 LRRC27Q9C0I9 530 aa24.24■■□□□ 1.47
TPM4-201ENST00000300933 ANKZF1Q9H8Y5 726 aa24.24■■□□□ 1.47
TPM4-201ENST00000300933 PCDHA2Q9Y5H9 948 aa24.24■■□□□ 1.47
TPM4-201ENST00000300933 MAP2K7O14733 419 aa24.24■■□□□ 1.47
TPM4-201ENST00000300933 MMP14P50281 582 aa24.24■■□□□ 1.47
TPM4-201ENST00000300933 PRAMEF18Q5VWM3 479 aa24.24■■□□□ 1.47
TPM4-201ENST00000300933 CCDC65Q8IXS2 484 aa24.24■■□□□ 1.47
TPM4-201ENST00000300933 PNKPQ96T60 521 aa24.24■■□□□ 1.47
TPM4-201ENST00000300933 IKZF4Q9H2S9 585 aa24.24■■□□□ 1.47
TPM4-201ENST00000300933 HOMER2Q9NSB8 354 aa24.24■■□□□ 1.47
TPM4-201ENST00000300933 DNM3Q9UQ16 869 aa24.24■■□□□ 1.47
TPM4-201ENST00000300933 COBLL1Q53SF7 1204 aa24.23■■□□□ 1.47
TPM4-201ENST00000300933 LEKR1Q6ZMV7 388 aa24.23■■□□□ 1.47
TPM4-201ENST00000300933 REEP2Q9BRK0 252 aa24.23■■□□□ 1.47
TPM4-201ENST00000300933 VAV3Q9UKW4 847 aa24.23■■□□□ 1.47
TPM4-201ENST00000300933 DUSP10Q9Y6W6 482 aa24.23■■□□□ 1.47
TPM4-201ENST00000300933 IGLV3-22A0A075B6J6 115 aa24.23■■□□□ 1.47
TPM4-201ENST00000300933 PHACTR2O75167 634 aa24.23■■□□□ 1.47
TPM4-201ENST00000300933 PPP1R2P41236 205 aa24.23■■□□□ 1.47
TPM4-201ENST00000300933 KIF4BQ2VIQ3 1234 aa24.23■■□□□ 1.47
TPM4-201ENST00000300933 CIAPIN1Q6FI81 312 aa24.23■■□□□ 1.47
TPM4-201ENST00000300933 FOXR1Q6PIV2 292 aa24.23■■□□□ 1.47
TPM4-201ENST00000300933 KRT26Q7Z3Y9 468 aa24.23■■□□□ 1.47
TPM4-201ENST00000300933 LDHDQ86WU2 507 aa24.23■■□□□ 1.47
TPM4-201ENST00000300933 TPH2Q8IWU9 490 aa24.23■■□□□ 1.47
TPM4-201ENST00000300933 EIF2AK1Q9BQI3 630 aaKnown RBP24.23■■□□□ 1.47
TPM4-201ENST00000300933 EMILIN3Q9NT22 766 aa24.23■■□□□ 1.47
TPM4-201ENST00000300933 RCCD1A6NED2 376 aa24.22■■□□□ 1.47
TPM4-201ENST00000300933 GCOM1H8Y6P7 765 aaPredicted RBP24.22■■□□□ 1.47
TPM4-201ENST00000300933 RHOXF2BP0C7M4 288 aa24.22■■□□□ 1.47
TPM4-201ENST00000300933 POLR2MP0CAP2 368 aa24.22■■□□□ 1.47
TPM4-201ENST00000300933 HERVK_113P62684 666 aa24.22■■□□□ 1.47
TPM4-201ENST00000300933 PSMD2Q13200 908 aa24.22■■□□□ 1.47
TPM4-201ENST00000300933 BRD3Q15059 726 aa24.22■■□□□ 1.47
TPM4-201ENST00000300933 CCDC40Q4G0X9 1142 aa24.22■■□□□ 1.47
TPM4-201ENST00000300933 HAUS3Q68CZ6 603 aa24.22■■□□□ 1.47
TPM4-201ENST00000300933 SRGAP1Q7Z6B7 1085 aa24.22■■□□□ 1.47
TPM4-201ENST00000300933 TSG101Q99816 390 aa24.22■■□□□ 1.47
TPM4-201ENST00000300933 RHOXF2Q9BQY4 288 aa24.22■■□□□ 1.47
TPM4-201ENST00000300933 DDX39AO00148 427 aaKnown RBP24.22■■□□□ 1.47
TPM4-201ENST00000300933 RPA1P27694 616 aa24.22■■□□□ 1.47
TPM4-201ENST00000300933 LRRC63Q05C16 580 aa24.22■■□□□ 1.47
TPM4-201ENST00000300933 GIT2Q14161 759 aa24.22■■□□□ 1.47
TPM4-201ENST00000300933 TRMT1LQ7Z2T5 733 aaKnown RBP24.22■■□□□ 1.47
TPM4-201ENST00000300933 JDP2Q8WYK2 163 aa24.22■■□□□ 1.47
TPM4-201ENST00000300933 RUSC1Q9BVN2 902 aa24.22■■□□□ 1.47
TPM4-201ENST00000300933 NHEJ1Q9H9Q4 299 aaPredicted RBP24.22■■□□□ 1.47
TPM4-201ENST00000300933 ENC1O14682 589 aa24.21■■□□□ 1.47
TPM4-201ENST00000300933 BEND6Q5SZJ8 279 aaPredicted RBP24.21■■□□□ 1.47
TPM4-201ENST00000300933 MOXD1Q6UVY6 613 aa24.21■■□□□ 1.47
TPM4-201ENST00000300933 SFR1Q86XK3 245 aa24.21■■□□□ 1.47
TPM4-201ENST00000300933 AGBL3Q8NEM8 1001 aa24.21■■□□□ 1.47
TPM4-201ENST00000300933 CHURC1Q8WUH1 139 aa24.21■■□□□ 1.47
TPM4-201ENST00000300933 PGAP2Q9UHJ9 254 aa24.21■■□□□ 1.47
TPM4-201ENST00000300933 FAN1Q9Y2M0 1017 aa24.21■■□□□ 1.47
TPM4-201ENST00000300933 ARP10275 920 aa24.21■■□□□ 1.47
TPM4-201ENST00000300933 KCNA1Q09470 495 aa24.21■■□□□ 1.47
TPM4-201ENST00000300933 MAN2A1Q16706 1144 aa24.21■■□□□ 1.47
TPM4-201ENST00000300933 TBC1D10BQ4KMP7 808 aaPredicted RBP24.21■■□□□ 1.47
TPM4-201ENST00000300933 ZCWPW2Q504Y3 356 aa24.21■■□□□ 1.47
TPM4-201ENST00000300933 ERGIC2Q96RQ1 377 aa24.21■■□□□ 1.47
TPM4-201ENST00000300933 LACRTQ9GZZ8 138 aa24.21■■□□□ 1.47
TPM4-201ENST00000300933 PSD3Q9NYI0 1048 aa24.21■■□□□ 1.47
TPM4-201ENST00000300933 SIK3Q9Y2K2 1263 aa24.21■■□□□ 1.47
TPM4-201ENST00000300933 GJA3Q9Y6H8 435 aa24.21■■□□□ 1.47
TPM4-201ENST00000300933 PRPF6O94906 941 aaKnown RBP24.2■■□□□ 1.47
TPM4-201ENST00000300933 ERMNQ8TAM6 284 aa24.2■■□□□ 1.47
TPM4-201ENST00000300933 TAOK3Q9H2K8 898 aa24.2■■□□□ 1.47
TPM4-201ENST00000300933 ABCB6Q9NP58 842 aa24.2■■□□□ 1.47
TPM4-201ENST00000300933 NLRC4Q9NPP4 1024 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms