RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 GOLGA8HP0CJ92 632 aa12□□□□□ -0.49
SNX20-201ENST00000300590 CYP2D6P10635 497 aa12□□□□□ -0.49
SNX20-201ENST00000300590 ALDH5A1P51649 535 aaPredicted RBP12□□□□□ -0.49
SNX20-201ENST00000300590 SLC8A3P57103 927 aa12□□□□□ -0.49
SNX20-201ENST00000300590 GRIK3Q13003 919 aa12□□□□□ -0.49
SNX20-201ENST00000300590 CUL1Q13616 776 aa12□□□□□ -0.49
SNX20-201ENST00000300590 TRPM8Q7Z2W7 1104 aa12□□□□□ -0.49
SNX20-201ENST00000300590 ERICH1Q86X53 443 aa12□□□□□ -0.49
SNX20-201ENST00000300590 METTL13Q8N6R0 699 aa12□□□□□ -0.49
SNX20-201ENST00000300590 A0A0G2JS52 829 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 C5orf60A6NFR6 353 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 TULP1O00294 542 aaPredicted RBP11.99□□□□□ -0.49
SNX20-201ENST00000300590 IGF2BP3O00425 579 aaKnown RBP eCLIP11.99□□□□□ -0.49
SNX20-201ENST00000300590 SERPING1P05155 500 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 CALM1P0DP23 149 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 CALM2P0DP24 149 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 CALM3P0DP25 149 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 CALML3P27482 149 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 PLTPP55058 493 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 ERMARDQ5T6L9 678 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 RCSD1Q6JBY9 416 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 TMC3Q7Z5M5 1100 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 NLRP10Q86W26 655 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 KLHL29Q96CT2 875 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 CDK5RAP3Q96JB5 506 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 ZHX3Q9H4I2 956 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 AZI2Q9H6S1 392 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 ATRNO75882 1429 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 SPEF2Q9C093 1822 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 F8VZ95 297 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 MKRN4PQ13434 485 aaPredicted RBP11.99□□□□□ -0.49
SNX20-201ENST00000300590 PEX26Q7Z412 305 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 PCDHA4Q9UN74 947 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 JAG2Q9Y219 1238 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 SSU72P8A0A1W2PR75 194 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 MYMKA6NI61 221 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 SPDYE3A6NKU9 549 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 PGRMC1O00264 195 aaKnown RBP11.99□□□□□ -0.49
SNX20-201ENST00000300590 ACTN1P12814 892 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 INHBEP58166 350 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 AMPD3Q01432 767 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 MTMR3Q13615 1198 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 SOGA3Q5TF21 947 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 AGBL2Q5U5Z8 902 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 ARMC3Q5W041 872 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 CENPPQ6IPU0 288 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 SV2BQ7L1I2 683 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 OTUD6AQ7L8S5 288 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 MARCH10Q8NA82 808 aaPredicted RBP11.99□□□□□ -0.49
SNX20-201ENST00000300590 SLC17A8Q8NDX2 589 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 ZNF512BQ96KM6 892 aaPredicted RBP11.99□□□□□ -0.49
SNX20-201ENST00000300590 FAM129AQ9BZQ8 928 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 CCSER1Q9C0I3 900 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 ECT2Q9H8V3 914 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 UTP11Q9Y3A2 253 aaKnown RBP11.99□□□□□ -0.49
SNX20-201ENST00000300590 NR2E1Q9Y466 385 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 ATP6V0A2Q9Y487 856 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 NID2Q14112 1375 aa11.99□□□□□ -0.49
SNX20-201ENST00000300590 GYG1P46976 350 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 RCAN1P53805 252 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 CACNB1Q02641 598 aaPredicted RBP11.98□□□□□ -0.49
SNX20-201ENST00000300590 ADCY1Q08828 1119 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 SLC18A3Q16572 532 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 ARMC9Q7Z3E5 817 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 MAB21L3Q8N8X9 362 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 GLG1Q92896 1179 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 CALML4Q96GE6 196 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 EBF2Q9HAK2 575 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 ARHGEF10LQ9HCE6 1279 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 PCDHA6Q9UN73 950 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 SNX24Q9Y343 169 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 PCDHA8Q9Y5H6 950 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 RGS16O15492 202 aaPredicted RBP11.98□□□□□ -0.49
SNX20-201ENST00000300590 ASIC2Q16515 512 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 UBAP2Q5T6F2 1119 aaKnown RBP11.98□□□□□ -0.49
SNX20-201ENST00000300590 FMO2Q99518 471 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 DBR1Q9UK59 544 aaKnown RBP11.98□□□□□ -0.49
SNX20-201ENST00000300590 TMEM94Q12767 1356 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 GHRP10912 638 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 NQO1P15559 274 aaKnown RBP11.98□□□□□ -0.49
SNX20-201ENST00000300590 RBBP5Q15291 538 aaKnown RBP11.98□□□□□ -0.49
SNX20-201ENST00000300590 C3orf20Q8ND61 904 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 C1orf131Q8NDD1 294 aaKnown RBP11.98□□□□□ -0.49
SNX20-201ENST00000300590 PCDHGC5Q9Y5F6 944 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 AKAP11Q9UKA4 1901 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 MYH2Q9UKX2 1941 aa11.98□□□□□ -0.49
SNX20-201ENST00000300590 SRRM3A6NNA2 597 aaPredicted RBP11.97□□□□□ -0.49
SNX20-201ENST00000300590 NOL4O94818 638 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 FGGP02679 453 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 PDHA1P08559 390 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 PSMD2Q13200 908 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 LLGL1Q15334 1064 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 CCDC25Q86WR0 208 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 CCDC26Q8TAB7 109 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 SH3GL3Q99963 347 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 LBHD1Q9BQE6 289 aaPredicted RBP11.97□□□□□ -0.49
SNX20-201ENST00000300590 BATF3Q9NR55 127 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.97□□□□□ -0.49
SNX20-201ENST00000300590 PNMA3Q9UL41 463 aa11.97□□□□□ -0.49
SNX20-201ENST00000300590 PNPLA7Q6ZV29 1317 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms