RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 IGLV3-22A0A075B6J6 115 aa13.03□□□□□ -0.32
RHO-201ENST00000296271 MOCS3O95396 460 aa13.03□□□□□ -0.32
RHO-201ENST00000296271 STAT2P52630 851 aa13.03□□□□□ -0.32
RHO-201ENST00000296271 VSNL1P62760 191 aa13.03□□□□□ -0.32
RHO-201ENST00000296271 DLGAP5Q15398 846 aa13.03□□□□□ -0.32
RHO-201ENST00000296271 TRMT1LQ7Z2T5 733 aaKnown RBP13.03□□□□□ -0.32
RHO-201ENST00000296271 NUP58Q9BVL2 599 aa13.03□□□□□ -0.32
RHO-201ENST00000296271 NT5C3AQ9H0P0 336 aa13.03□□□□□ -0.32
RHO-201ENST00000296271 HAUS4Q9H6D7 363 aa13.03□□□□□ -0.32
RHO-201ENST00000296271 ZBTB21Q9ULJ3 1066 aa13.03□□□□□ -0.32
RHO-201ENST00000296271 CLIC2O15247 247 aa13.03□□□□□ -0.32
RHO-201ENST00000296271 CXCR5P32302 372 aa13.03□□□□□ -0.32
RHO-201ENST00000296271 KIF11P52732 1056 aa13.03□□□□□ -0.32
RHO-201ENST00000296271 POLR2FP61218 127 aaKnown RBP13.03□□□□□ -0.32
RHO-201ENST00000296271 FKBP3Q00688 224 aaKnown RBP13.03□□□□□ -0.32
RHO-201ENST00000296271 BMS1Q14692 1282 aaKnown RBP13.03□□□□□ -0.32
RHO-201ENST00000296271 TRAPPC11Q7Z392 1133 aa13.03□□□□□ -0.32
RHO-201ENST00000296271 GMLQ99445 158 aa13.03□□□□□ -0.32
RHO-201ENST00000296271 TSG101Q99816 390 aa13.03□□□□□ -0.32
RHO-201ENST00000296271 EIF2AK1Q9BQI3 630 aaKnown RBP13.03□□□□□ -0.32
RHO-201ENST00000296271 LSM14BQ9BX40 385 aaKnown RBP13.03□□□□□ -0.32
RHO-201ENST00000296271 BMP2KQ9NSY1 1161 aaPredicted RBP13.03□□□□□ -0.32
RHO-201ENST00000296271 EIF3CLB5ME19 914 aaKnown RBP13.02□□□□□ -0.32
RHO-201ENST00000296271 NCK2O43639 380 aa13.02□□□□□ -0.32
RHO-201ENST00000296271 CYLC1P35663 651 aaPredicted RBP13.02□□□□□ -0.32
RHO-201ENST00000296271 CASP4P49662 377 aa13.02□□□□□ -0.32
RHO-201ENST00000296271 PSMD2Q13200 908 aa13.02□□□□□ -0.32
RHO-201ENST00000296271 SEMA3FQ13275 785 aa13.02□□□□□ -0.32
RHO-201ENST00000296271 AP3B2Q13367 1082 aa13.02□□□□□ -0.32
RHO-201ENST00000296271 ADAM9Q13443 819 aa13.02□□□□□ -0.32
RHO-201ENST00000296271 TPH2Q8IWU9 490 aa13.02□□□□□ -0.32
RHO-201ENST00000296271 CCDC65Q8IXS2 484 aa13.02□□□□□ -0.32
RHO-201ENST00000296271 EIF3CQ99613 913 aaKnown RBP13.02□□□□□ -0.32
RHO-201ENST00000296271 SH2D3AQ9BRG2 576 aa13.02□□□□□ -0.32
RHO-201ENST00000296271 KDM3AQ9Y4C1 1321 aa13.02□□□□□ -0.32
RHO-201ENST00000296271 TNS1Q9HBL0 1735 aaKnown RBP13.02□□□□□ -0.33
RHO-201ENST00000296271 DDX39AO00148 427 aaKnown RBP13.02□□□□□ -0.33
RHO-201ENST00000296271 ARP10275 920 aa13.02□□□□□ -0.33
RHO-201ENST00000296271 DMTNQ08495 405 aa13.02□□□□□ -0.33
RHO-201ENST00000296271 Q4G0T1 1027 aa13.02□□□□□ -0.33
RHO-201ENST00000296271 ZC2HC1CQ53FD0 456 aaPredicted RBP13.02□□□□□ -0.33
RHO-201ENST00000296271 BTNL9Q6UXG8 535 aa13.02□□□□□ -0.33
RHO-201ENST00000296271 SLFN12Q8IYM2 578 aa13.02□□□□□ -0.33
RHO-201ENST00000296271 RETREG2Q8NC44 543 aa13.02□□□□□ -0.33
RHO-201ENST00000296271 DYDC2Q96IM9 177 aa13.02□□□□□ -0.33
RHO-201ENST00000296271 AGBL1Q96MI9 1066 aa13.02□□□□□ -0.33
RHO-201ENST00000296271 FUT8Q9BYC5 575 aa13.02□□□□□ -0.33
RHO-201ENST00000296271 ABCB6Q9NP58 842 aa13.02□□□□□ -0.33
RHO-201ENST00000296271 ARGLU1Q9NWB6 273 aaPredicted RBP13.02□□□□□ -0.33
RHO-201ENST00000296271 PRDM4Q9UKN5 801 aa13.02□□□□□ -0.33
RHO-201ENST00000296271 FZD1Q9UP38 647 aa13.02□□□□□ -0.33
RHO-201ENST00000296271 PCDHA13Q9Y5I0 950 aa13.02□□□□□ -0.33
RHO-201ENST00000296271 ASTN2O75129 1339 aaPredicted RBP13.02□□□□□ -0.33
RHO-201ENST00000296271 CTAGE15A4D2H0 777 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 BUB1O43683 1085 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 CTAGE8P0CG41 777 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 NR2F2P24468 414 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 RPA1P27694 616 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 NMT1P30419 496 aaKnown RBP13.01□□□□□ -0.33
RHO-201ENST00000296271 LONRF2Q1L5Z9 754 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 HGSNATQ68CP4 663 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 CACNA2D4Q7Z3S7 1137 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 CTAGE6Q86UF2 777 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 TRIM59Q8IWR1 403 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 CTAGE4Q8IX94 777 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 TTLL6Q8N841 843 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 GDAP1L1Q96MZ0 367 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 IFIH1Q9BYX4 1025 aaKnown RBP13.01□□□□□ -0.33
RHO-201ENST00000296271 STK32BQ9NY57 414 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 DNM3Q9UQ16 869 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 BCS1LQ9Y276 419 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 TMX2Q9Y320 296 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 A0A1W2PQJ5 194 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 AKR1B10O60218 316 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 NPM3O75607 178 aaKnown RBP13.01□□□□□ -0.33
RHO-201ENST00000296271 SLC9A1P19634 815 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 INPP5BP32019 993 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 PPP1R2P41236 205 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 MMP14P50281 582 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 DNA2P51530 1060 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 KRT83P78385 493 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 RASSF7Q02833 373 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 COG2Q14746 738 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 PDXDC1Q6P996 788 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 GSPT2Q8IYD1 628 aaKnown RBP13.01□□□□□ -0.33
RHO-201ENST00000296271 CEP112Q8N8E3 955 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 NEK11Q8NG66 645 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 DEF6Q9H4E7 631 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 TMOD2Q9NZR1 351 aa13.01□□□□□ -0.33
RHO-201ENST00000296271 VIL1P09327 827 aaKnown RBP13□□□□□ -0.33
RHO-201ENST00000296271 VAV2P52735 878 aa13□□□□□ -0.33
RHO-201ENST00000296271 TDRD12Q587J7 1177 aaKnown RBP13□□□□□ -0.33
RHO-201ENST00000296271 FIGNQ5HY92 759 aa13□□□□□ -0.33
RHO-201ENST00000296271 GJB7Q6PEY0 223 aa13□□□□□ -0.33
RHO-201ENST00000296271 MAEAQ7L5Y9 396 aa13□□□□□ -0.33
RHO-201ENST00000296271 SYT2Q8N9I0 419 aaPredicted RBP13□□□□□ -0.33
RHO-201ENST00000296271 COG1Q8WTW3 980 aa13□□□□□ -0.33
RHO-201ENST00000296271 FAM151AQ8WW52 585 aa13□□□□□ -0.33
RHO-201ENST00000296271 PURBQ96QR8 312 aaKnown RBP13□□□□□ -0.33
RHO-201ENST00000296271 AJAP1Q9UKB5 411 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms