RNA–Protein interactions for RNA: ENST00000296137.6

FYCO1-201, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FYCO1, Length 8,504 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-201ENST00000296137 USP28Q96RU2 1077 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 CCDC134Q9H6E4 229 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 DBF4Q9UBU7 674 aaPredicted RBP11.81□□□□□ -0.52
FYCO1-201ENST00000296137 TSC22D2O75157 780 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 SEC24DO94855 1032 aaPredicted RBP11.81□□□□□ -0.52
FYCO1-201ENST00000296137 HSPA13P48723 471 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 TTBK2Q6IQ55 1244 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 ACAD11Q709F0 780 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 FANCEQ9HB96 536 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 KLHL20Q9Y2M5 609 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 CPP00450 1065 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 LRRC36Q1X8D7 754 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 PCP4L1A6NKN8 68 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 NDUFA8P51970 172 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 UBE3AQ05086 875 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 ADRM1Q16186 407 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 CENPUQ71F23 418 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 STKLD1Q8NE28 680 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.81□□□□□ -0.52
FYCO1-201ENST00000296137 C19orf60Q96EN9 201 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 NSMCE4AQ9NXX6 385 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 TCP11X1B4DZS4 312 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 SLC27A2O14975 620 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 PFDN6O15212 129 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 STAM2O75886 525 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 IL10P22301 178 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 MDH1P40925 334 aaKnown RBP11.81□□□□□ -0.52
FYCO1-201ENST00000296137 IL12RB1P42701 662 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 RECQLP46063 649 aaPredicted RBP11.81□□□□□ -0.52
FYCO1-201ENST00000296137 TUBA4AP68366 448 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 PLEKHA7Q6IQ23 1121 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 AFAP1Q8N556 730 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 CYGBQ8WWM9 190 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 LRRC39Q96DD0 335 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 MTBPQ96DY7 904 aa11.81□□□□□ -0.52
FYCO1-201ENST00000296137 BAZ2BQ9UIF8 2168 aaKnown RBP11.81□□□□□ -0.52
FYCO1-201ENST00000296137 CTTNQ14247 550 aaKnown RBP11.8□□□□□ -0.52
FYCO1-201ENST00000296137 SPATA21Q7Z572 469 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 VCPKMTQ9H867 229 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 DCTN4Q9UJW0 460 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 RGS12O14924 1447 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 PROCA1Q8NCQ7 364 aaPredicted RBP11.8□□□□□ -0.52
FYCO1-201ENST00000296137 AHCYL1O43865 530 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 GOLGA8HP0CJ92 632 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 SOX6P35712 828 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 EME1Q96AY2 570 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 CYFIP2Q96F07 1278 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 MTTPP55157 894 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 FAM81BQ96LP2 452 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 LSG1Q9H089 658 aaKnown RBP11.8□□□□□ -0.52
FYCO1-201ENST00000296137 PRDM4Q9UKN5 801 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 TRIM49P0CI25 452 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 TRIM49CP0CI26 452 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 ATP6V1B1P15313 513 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 GPIHBP1Q8IV16 184 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 PARD3BQ8TEW8 1205 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 MIEF2Q96C03 454 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 NAP1L4Q99733 375 aaKnown RBP11.8□□□□□ -0.52
FYCO1-201ENST00000296137 CLEC4MQ9H2X3 399 aaPredicted RBP11.8□□□□□ -0.52
FYCO1-201ENST00000296137 KCNA1Q09470 495 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 RRS1Q15050 365 aaKnown RBP11.8□□□□□ -0.52
FYCO1-201ENST00000296137 FAM173BQ6P4H8 233 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 POTEAQ6S8J7 498 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 ATP6V1HQ9UI12 483 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 AOX1Q06278 1338 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 PPP1R37O75864 691 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 OCM2P0CE71 109 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 OCMP0CE72 109 aaPredicted RBP11.8□□□□□ -0.52
FYCO1-201ENST00000296137 RUNX1T1Q06455 604 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 DEPDC1BQ8WUY9 529 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 VTI1AQ96AJ9 217 aa11.8□□□□□ -0.52
FYCO1-201ENST00000296137 FAM25AB3EWG3 89 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 FAM25CB3EWG5 89 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 FAM25GB3EWG6 89 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 XPO1O14980 1071 aaKnown RBP11.79□□□□□ -0.52
FYCO1-201ENST00000296137 NDUFA10O95299 355 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 FCHO2Q0JRZ9 810 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 STX19Q8N4C7 294 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 RNF217Q8TC41 542 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 CSRNP1Q96S65 589 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 MEIS3Q99687 375 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 NHEJ1Q9H9Q4 299 aaPredicted RBP11.79□□□□□ -0.52
FYCO1-201ENST00000296137 SOS1Q07889 1333 aaPredicted RBP11.79□□□□□ -0.52
FYCO1-201ENST00000296137 AARSP49588 968 aaKnown RBP eCLIP11.79□□□□□ -0.523e-7■■■■■ 72.1
FYCO1-201ENST00000296137 RCN1Q15293 331 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 PATL1Q86TB9 770 aaKnown RBP11.79□□□□□ -0.52
FYCO1-201ENST00000296137 RTL3Q8N8U3 475 aaKnown RBP11.79□□□□□ -0.52
FYCO1-201ENST00000296137 RNF34Q969K3 372 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 PBXIP1Q96AQ6 731 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 DISC1Q9NRI5 854 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 PPIP5K2O43314 1243 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 KITP10721 976 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 RXRAP19793 462 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 MARK3P27448 753 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 CCDC142Q17RM4 750 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 UBE2OQ9C0C9 1292 aaKnown RBP11.79□□□□□ -0.52
FYCO1-201ENST00000296137 CD209Q9NNX6 404 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 EURLQ9NYK6 297 aa11.79□□□□□ -0.52
FYCO1-201ENST00000296137 USP15Q9Y4E8 981 aaPredicted RBP11.79□□□□□ -0.52
FYCO1-201ENST00000296137 CFAP69A5D8W1 941 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms