RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 ERCC3P19447 782 aa25.47■■□□□ 1.67
PTX3-201ENST00000295927 UBASH3AP57075 661 aa25.47■■□□□ 1.67
PTX3-201ENST00000295927 COBLL1Q53SF7 1204 aa25.47■■□□□ 1.67
PTX3-201ENST00000295927 DNERQ8NFT8 737 aa25.47■■□□□ 1.67
PTX3-201ENST00000295927 MS4A4AQ96JQ5 239 aa25.47■■□□□ 1.67
PTX3-201ENST00000295927 SLC39A2Q9NP94 309 aa25.47■■□□□ 1.67
PTX3-201ENST00000295927 CETPP11597 493 aa25.46■■□□□ 1.67
PTX3-201ENST00000295927 MKRN3Q13064 507 aaKnown RBP25.46■■□□□ 1.67
PTX3-201ENST00000295927 TPD52L1Q16890 204 aaPredicted RBP25.46■■□□□ 1.67
PTX3-201ENST00000295927 Q3C1V9 767 aa25.46■■□□□ 1.67
PTX3-201ENST00000295927 DHTKD1Q96HY7 919 aaPredicted RBP25.46■■□□□ 1.67
PTX3-201ENST00000295927 IWS1Q96ST2 819 aa25.46■■□□□ 1.67
PTX3-201ENST00000295927 BHMT2Q9H2M3 363 aa25.46■■□□□ 1.67
PTX3-201ENST00000295927 PANK4Q9NVE7 773 aa25.46■■□□□ 1.67
PTX3-201ENST00000295927 NRBP1Q9UHY1 535 aa25.46■■□□□ 1.67
PTX3-201ENST00000295927 ASTN1O14525 1302 aa25.46■■□□□ 1.67
PTX3-201ENST00000295927 SOCS7O14512 581 aa25.45■■□□□ 1.67
PTX3-201ENST00000295927 RGS20O76081 388 aa25.45■■□□□ 1.67
PTX3-201ENST00000295927 PPP1R2P41236 205 aa25.45■■□□□ 1.67
PTX3-201ENST00000295927 GTF2A2P52657 109 aa25.45■■□□□ 1.67
PTX3-201ENST00000295927 COASYQ13057 564 aa25.45■■□□□ 1.67
PTX3-201ENST00000295927 PSMD2Q13200 908 aa25.45■■□□□ 1.67
PTX3-201ENST00000295927 CDKAL1Q5VV42 579 aa25.45■■□□□ 1.67
PTX3-201ENST00000295927 PIGOQ8TEQ8 1089 aa25.45■■□□□ 1.67
PTX3-201ENST00000295927 R3HDMLQ9H3Y0 253 aa25.45■■□□□ 1.67
PTX3-201ENST00000295927 WRAP73Q9P2S5 460 aaPredicted RBP25.45■■□□□ 1.67
PTX3-201ENST00000295927 MAFGO15525 162 aa25.45■■□□□ 1.66
PTX3-201ENST00000295927 CBFA2T2O43439 604 aa25.45■■□□□ 1.66
PTX3-201ENST00000295927 STAM2O75886 525 aa25.45■■□□□ 1.66
PTX3-201ENST00000295927 KRT18P05783 430 aaKnown RBP25.45■■□□□ 1.66
PTX3-201ENST00000295927 CCDC65Q8IXS2 484 aa25.45■■□□□ 1.66
PTX3-201ENST00000295927 NEK9Q8TD19 979 aa25.45■■□□□ 1.66
PTX3-201ENST00000295927 NAP1L5Q96NT1 182 aaPredicted RBP25.45■■□□□ 1.66
PTX3-201ENST00000295927 PNMA3Q9UL41 463 aa25.45■■□□□ 1.66
PTX3-201ENST00000295927 CCL15-CCL14A0A0B4J2E2 113 aa25.44■■□□□ 1.66
PTX3-201ENST00000295927 TRIM49BA6NDI0 452 aa25.44■■□□□ 1.66
PTX3-201ENST00000295927 PMS1P54277 932 aaKnown RBP25.44■■□□□ 1.66
PTX3-201ENST00000295927 CACNB1Q02641 598 aaPredicted RBP25.44■■□□□ 1.66
PTX3-201ENST00000295927 RAD51AP2Q09MP3 1159 aa25.44■■□□□ 1.66
PTX3-201ENST00000295927 CCL15Q16663 113 aa25.44■■□□□ 1.66
PTX3-201ENST00000295927 BANK1Q8NDB2 785 aa25.44■■□□□ 1.66
PTX3-201ENST00000295927 LXNQ9BS40 222 aa25.44■■□□□ 1.66
PTX3-201ENST00000295927 LOXHD1Q8IVV2 1947 aa25.44■■□□□ 1.66
PTX3-201ENST00000295927 POTEB2H3BUK9 544 aa25.43■■□□□ 1.66
PTX3-201ENST00000295927 CYP2C8P10632 490 aa25.43■■□□□ 1.66
PTX3-201ENST00000295927 COPB2P35606 906 aa25.43■■□□□ 1.66
PTX3-201ENST00000295927 CST9Q5W186 159 aa25.43■■□□□ 1.66
PTX3-201ENST00000295927 ZSCAN30Q86W11 494 aa25.43■■□□□ 1.66
PTX3-201ENST00000295927 ZNF830Q96NB3 372 aaPredicted RBP25.43■■□□□ 1.66
PTX3-201ENST00000295927 NACC1Q96RE7 527 aa25.43■■□□□ 1.66
PTX3-201ENST00000295927 TRPM7Q96QT4 1865 aa25.43■■□□□ 1.66
PTX3-201ENST00000295927 ESPNB1AK53 854 aa25.43■■□□□ 1.66
PTX3-201ENST00000295927 ZBTB39O15060 712 aa25.43■■□□□ 1.66
PTX3-201ENST00000295927 ALDH5A1P51649 535 aaPredicted RBP25.43■■□□□ 1.66
PTX3-201ENST00000295927 GIT2Q14161 759 aa25.43■■□□□ 1.66
PTX3-201ENST00000295927 CCDC186Q7Z3E2 898 aa25.43■■□□□ 1.66
PTX3-201ENST00000295927 SAMM50Q9Y512 469 aa25.43■■□□□ 1.66
PTX3-201ENST00000295927 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.43■■□□□ 1.66
PTX3-201ENST00000295927 DOCK5Q9H7D0 1870 aa25.42■■□□□ 1.66
PTX3-201ENST00000295927 FRMD3A2A2Y4 597 aa25.42■■□□□ 1.66
PTX3-201ENST00000295927 DCAF8L1A6NGE4 600 aa25.42■■□□□ 1.66
PTX3-201ENST00000295927 BTBD19C9JJ37 291 aa25.42■■□□□ 1.66
PTX3-201ENST00000295927 PDHXO00330 501 aa25.42■■□□□ 1.66
PTX3-201ENST00000295927 ITGBL1O95965 494 aaPredicted RBP25.42■■□□□ 1.66
PTX3-201ENST00000295927 P4HBP07237 508 aaKnown RBP25.42■■□□□ 1.66
PTX3-201ENST00000295927 CCNE1P24864 410 aa25.42■■□□□ 1.66
PTX3-201ENST00000295927 STXBP2Q15833 593 aa25.42■■□□□ 1.66
PTX3-201ENST00000295927 CCDC144BQ3MJ40 725 aa25.42■■□□□ 1.66
PTX3-201ENST00000295927 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.42■■□□□ 1.66
PTX3-201ENST00000295927 BRI3BPQ8WY22 251 aa25.42■■□□□ 1.66
PTX3-201ENST00000295927 P2RX5Q93086 422 aa25.42■■□□□ 1.66
PTX3-201ENST00000295927 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.42■■□□□ 1.66
PTX3-201ENST00000295927 SLC45A1Q9Y2W3 748 aa25.42■■□□□ 1.66
PTX3-201ENST00000295927 SOWAHBA6NEL2 793 aa25.41■■□□□ 1.66
PTX3-201ENST00000295927 TPM3P06753 285 aa25.41■■□□□ 1.66
PTX3-201ENST00000295927 PTGS1P23219 599 aa25.41■■□□□ 1.66
PTX3-201ENST00000295927 ERVK-9P63128 1117 aa25.41■■□□□ 1.66
PTX3-201ENST00000295927 ERVK-24P63145 666 aa25.41■■□□□ 1.66
PTX3-201ENST00000295927 KRT76Q01546 638 aa25.41■■□□□ 1.66
PTX3-201ENST00000295927 FSTL1Q12841 308 aa25.41■■□□□ 1.66
PTX3-201ENST00000295927 FAM26FQ5R3K3 315 aa25.41■■□□□ 1.66
PTX3-201ENST00000295927 SPRYD7Q5W111 196 aa25.41■■□□□ 1.66
PTX3-201ENST00000295927 TTI2Q6NXR4 508 aa25.41■■□□□ 1.66
PTX3-201ENST00000295927 FAM133AQ8N9E0 248 aa25.41■■□□□ 1.66
PTX3-201ENST00000295927 CDHR1Q96JP9 859 aa25.41■■□□□ 1.66
PTX3-201ENST00000295927 REEP2Q9BRK0 252 aa25.41■■□□□ 1.66
PTX3-201ENST00000295927 RUSC1Q9BVN2 902 aa25.41■■□□□ 1.66
PTX3-201ENST00000295927 ZKSCAN5Q9Y2L8 839 aa25.41■■□□□ 1.66
PTX3-201ENST00000295927 CCNE2O96020 404 aa25.41■■□□□ 1.66
PTX3-201ENST00000295927 KCNA2P16389 499 aa25.41■■□□□ 1.66
PTX3-201ENST00000295927 GNPTABQ3T906 1256 aa25.41■■□□□ 1.66
PTX3-201ENST00000295927 GUF1Q8N442 669 aaKnown RBP25.41■■□□□ 1.66
PTX3-201ENST00000295927 GTF3C2Q8WUA4 911 aaPredicted RBP25.41■■□□□ 1.66
PTX3-201ENST00000295927 ADD3Q9UEY8 706 aaKnown RBP25.41■■□□□ 1.66
PTX3-201ENST00000295927 EIF3JO75822 258 aaKnown RBP25.4■■□□□ 1.66
PTX3-201ENST00000295927 JAK3P52333 1124 aa25.4■■□□□ 1.66
PTX3-201ENST00000295927 HERC4Q5GLZ8 1057 aaPredicted RBP25.4■■□□□ 1.66
PTX3-201ENST00000295927 CHADLQ6NUI6 762 aa25.4■■□□□ 1.66
PTX3-201ENST00000295927 RINT1Q6NUQ1 792 aa25.4■■□□□ 1.66
PTX3-201ENST00000295927 GLIS3Q8NEA6 775 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms