RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 STIM2Q9P246 746 aa16.85■□□□□ 0.29
LRRTM1-201ENST00000295057 ZNF70Q9UC06 446 aaPredicted RBP16.85■□□□□ 0.29
LRRTM1-201ENST00000295057 MYO3BQ8WXR4 1341 aa16.85■□□□□ 0.29
LRRTM1-201ENST00000295057 ZSCAN5CA6NGD5 496 aaPredicted RBP16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 FAM153BP0C7A2 387 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 VAV2P52735 878 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 NAP1L1P55209 391 aaKnown RBP16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 FAM153CQ494X1 144 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 MIGA2Q7L4E1 593 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 SPICE1Q8N0Z3 855 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 TBCKQ8TEA7 893 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 CCDC17Q96LX7 622 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 PCMTD1Q96MG8 357 aaPredicted RBP16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 UIMC1Q96RL1 719 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 OSBPL9Q96SU4 736 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 TMEM39BQ9GZU3 492 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 ZNHIT6Q9NWK9 470 aaKnown RBP16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 FAM153AQ9UHL3 310 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 ESYT3A0FGR9 886 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 BMP15O95972 392 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 IBSPP21815 317 aaPredicted RBP16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 SCP2P22307 547 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 RNF187Q5TA31 235 aaPredicted RBP16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 ALS2CLQ60I27 953 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 SLFN13Q68D06 897 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 ZKSCAN4Q969J2 545 aaPredicted RBP16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 ZNRF3Q9ULT6 936 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 A0A1W2PRG0 241 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 ZNF233A6NK53 670 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 EGFRP00533 1210 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 EEF1GP26641 437 aaKnown RBP16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 SLC1A4P43007 532 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 NBPF9Q3BBW0 867 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 EMBQ6PCB8 327 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 NIM1KQ8IY84 436 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 REXO1Q8N1G1 1221 aaKnown RBP16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 OGFOD1Q8N543 542 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 CCDC43Q96MW1 224 aaKnown RBP16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 TUBGCP2Q9BSJ2 902 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 KANSL2Q9H9L4 492 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 RBM12Q9NTZ6 932 aaKnown RBP16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 EXOC1Q9NV70 894 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 RMND1Q9NWS8 449 aa16.84■□□□□ 0.29
LRRTM1-201ENST00000295057 SMARCA1P28370 1054 aa16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 DNM2P50570 870 aa16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 NEDD9Q14511 834 aa16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 NONOQ15233 471 aaKnown RBP eCLIP16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 RBM26Q5T8P6 1007 aaKnown RBP16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 LRCH2Q5VUJ6 765 aa16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 GALNT17Q6IS24 598 aa16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 CCDC170Q8IYT3 715 aa16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 ZNF473Q8WTR7 871 aaKnown RBP16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 F5H6K3 240 aa16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 EDIL3O43854 480 aa16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 ENTPD3O75355 529 aa16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 GNA11P29992 359 aa16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 ECE1P42892 770 aa16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 CARSP49589 748 aaKnown RBP16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 ZBED6P86452 979 aa16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 KLRC3Q07444 240 aa16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 TBC1D8BQ0IIM8 1120 aa16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 DALRD3Q5D0E6 543 aaKnown RBP16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 TRIM58Q8NG06 486 aa16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 CAVIN3Q969G5 261 aa16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 MS4A14Q96JA4 679 aa16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 CCDC42Q96M95 316 aa16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 EPN3Q9H201 632 aa16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.83■□□□□ 0.28
LRRTM1-201ENST00000295057 ATXN2Q99700 1313 aaKnown RBP16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 PNMA6FA0A0J9YX94 578 aa16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 STAT6P42226 847 aa16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 ZNF572Q7Z3I7 529 aaPredicted RBP16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 CCDC84Q86UT8 332 aaPredicted RBP16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 EGFL6Q8IUX8 553 aa16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 ANKRD13CQ8N6S4 541 aa16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 LRRC15Q8TF66 581 aa16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 GJA10Q969M2 543 aa16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 SH2D4AQ9H788 454 aa16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 MAGEC2Q9UBF1 373 aaPredicted RBP16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 SALL4Q9UJQ4 1053 aa16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 NFU1Q9UMS0 254 aa16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 CNTNAP1P78357 1384 aa16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 PPP1R12AO14974 1030 aaPredicted RBP16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 TACC1O75410 805 aa16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 GLI1P08151 1106 aa16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 ELF1P32519 619 aa16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 CCDC181Q5TID7 509 aa16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 C8orf74Q6P047 294 aa16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 DTHD1Q6ZMT9 781 aa16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 IFIH1Q9BYX4 1025 aaKnown RBP16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 THAP9Q9H5L6 903 aa16.82■□□□□ 0.28
LRRTM1-201ENST00000295057 NDUFB10O96000 172 aa16.81■□□□□ 0.28
LRRTM1-201ENST00000295057 ADCY7P51828 1080 aa16.81■□□□□ 0.28
LRRTM1-201ENST00000295057 IFT88Q13099 833 aa16.81■□□□□ 0.28
LRRTM1-201ENST00000295057 PPP2R5AQ15172 486 aa16.81■□□□□ 0.28
LRRTM1-201ENST00000295057 SPA17Q15506 151 aa16.81■□□□□ 0.28
LRRTM1-201ENST00000295057 KIAA1755Q5JYT7 1200 aa16.81■□□□□ 0.28
LRRTM1-201ENST00000295057 TTI2Q6NXR4 508 aa16.81■□□□□ 0.28
LRRTM1-201ENST00000295057 KDM7AQ6ZMT4 941 aa16.81■□□□□ 0.28
LRRTM1-201ENST00000295057 TMEM179Q6ZVK1 233 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms