RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 FBXO2Q9UK22 296 aaPredicted RBP17.41■□□□□ 0.38
SSRP1-202ENST00000293880 NR5A1Q13285 461 aa17.41■□□□□ 0.38
SSRP1-202ENST00000293880 TDRD7Q8NHU6 1098 aaKnown RBP17.41■□□□□ 0.38
SSRP1-202ENST00000293880 PRKAB2O43741 272 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 PSMC1P62191 440 aaKnown RBP17.4■□□□□ 0.38
SSRP1-202ENST00000293880 APBA1Q02410 837 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 SLFN13Q68D06 897 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 MCTP2Q6DN12 878 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 FBXO38Q6PIJ6 1188 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 KIAA2013Q8IYS2 634 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 TRIML2Q8N7C3 387 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 RUNDC3BQ96NL0 473 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 NPR1P16066 1061 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 SOX5P35711 763 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 FAM149B1Q96BN6 582 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 PIGSQ96S52 555 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 ANGPTL2Q9UKU9 493 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 DYTNA2CJ06 578 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 SFI1A8K8P3 1242 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 BNIP3LO60238 219 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 SRGAP2BP0DMP2 458 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 SSTR3P32745 418 aaPredicted RBP17.4■□□□□ 0.38
SSRP1-202ENST00000293880 CASP8Q14790 479 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 GPR162Q16538 588 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 TRIM67Q6ZTA4 783 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 SAAL1Q96ER3 474 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.4■□□□□ 0.38
SSRP1-202ENST00000293880 SYNDIG1LA6NDD5 238 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 BEND6Q5SZJ8 279 aaPredicted RBP17.4■□□□□ 0.38
SSRP1-202ENST00000293880 KRT27Q7Z3Y8 459 aa17.4■□□□□ 0.38
SSRP1-202ENST00000293880 CFAP65Q6ZU64 1925 aaKnown RBP17.4■□□□□ 0.38
SSRP1-202ENST00000293880 PFDN6O15212 129 aa17.39■□□□□ 0.38
SSRP1-202ENST00000293880 PCDHA1Q9Y5I3 950 aa17.39■□□□□ 0.38
SSRP1-202ENST00000293880 ESRRAP11474 423 aaPredicted RBP17.39■□□□□ 0.37
SSRP1-202ENST00000293880 ZFXP17010 805 aaPredicted RBP17.39■□□□□ 0.37
SSRP1-202ENST00000293880 ANO4Q32M45 955 aa17.39■□□□□ 0.37
SSRP1-202ENST00000293880 TRAPPC10P48553 1259 aa17.39■□□□□ 0.37
SSRP1-202ENST00000293880 PPP2R5EQ16537 467 aa17.39■□□□□ 0.37
SSRP1-202ENST00000293880 FBXL13Q8NEE6 735 aa17.39■□□□□ 0.37
SSRP1-202ENST00000293880 RAPGEF5Q92565 580 aa17.39■□□□□ 0.37
SSRP1-202ENST00000293880 TTC17Q96AE7 1141 aa17.39■□□□□ 0.37
SSRP1-202ENST00000293880 SUCLA2Q9P2R7 463 aaPredicted RBP17.39■□□□□ 0.37
SSRP1-202ENST00000293880 ABCC4O15439 1325 aa17.39■□□□□ 0.37
SSRP1-202ENST00000293880 TFAMQ00059 246 aaKnown RBP17.39■□□□□ 0.37
SSRP1-202ENST00000293880 OR6B2Q6IFH4 312 aa17.39■□□□□ 0.37
SSRP1-202ENST00000293880 CENPKQ9BS16 269 aa17.39■□□□□ 0.37
SSRP1-202ENST00000293880 EIF2AQ9BY44 585 aaKnown RBP17.39■□□□□ 0.37
SSRP1-202ENST00000293880 WDR62O43379 1518 aa17.39■□□□□ 0.37
SSRP1-202ENST00000293880 BBS9Q3SYG4 887 aa17.39■□□□□ 0.37
SSRP1-202ENST00000293880 TBCKQ8TEA7 893 aa17.39■□□□□ 0.37
SSRP1-202ENST00000293880 SNX25Q9H3E2 840 aa17.39■□□□□ 0.37
SSRP1-202ENST00000293880 ANTXR1Q9H6X2 564 aa17.39■□□□□ 0.37
SSRP1-202ENST00000293880 AS3MTQ9HBK9 375 aa17.39■□□□□ 0.37
SSRP1-202ENST00000293880 PPP6R2O75170 966 aa17.38■□□□□ 0.37
SSRP1-202ENST00000293880 POLR2BP30876 1174 aaKnown RBP17.38■□□□□ 0.37
SSRP1-202ENST00000293880 USP44Q9H0E7 712 aa17.38■□□□□ 0.37
SSRP1-202ENST00000293880 EEPD1Q7L9B9 569 aa17.38■□□□□ 0.37
SSRP1-202ENST00000293880 FLCNQ8NFG4 579 aa17.38■□□□□ 0.37
SSRP1-202ENST00000293880 RASGRF2O14827 1237 aa17.38■□□□□ 0.37
SSRP1-202ENST00000293880 PDCLQ13371 301 aa17.38■□□□□ 0.37
SSRP1-202ENST00000293880 CCDC85BQ15834 202 aaPredicted RBP17.38■□□□□ 0.37
SSRP1-202ENST00000293880 NCLNQ969V3 563 aa17.38■□□□□ 0.37
SSRP1-202ENST00000293880 SSH2Q76I76 1423 aa17.38■□□□□ 0.37
SSRP1-202ENST00000293880 MARK3P27448 753 aa17.38■□□□□ 0.37
SSRP1-202ENST00000293880 TCIRG1Q13488 830 aa17.38■□□□□ 0.37
SSRP1-202ENST00000293880 SZRD1Q7Z422 152 aa17.38■□□□□ 0.37
SSRP1-202ENST00000293880 PCGF5Q86SE9 256 aa17.38■□□□□ 0.37
SSRP1-202ENST00000293880 TLK1Q9UKI8 766 aa17.38■□□□□ 0.37
SSRP1-202ENST00000293880 SF3B3Q15393 1217 aaKnown RBP17.38■□□□□ 0.37
SSRP1-202ENST00000293880 SPDYE1Q8NFV5 336 aaPredicted RBP17.38■□□□□ 0.37
SSRP1-202ENST00000293880 RPS6KC1Q96S38 1066 aa17.38■□□□□ 0.37
SSRP1-202ENST00000293880 PCDHB6Q9Y5E3 794 aa17.38■□□□□ 0.37
SSRP1-202ENST00000293880 A0A087WUV0 522 aaPredicted RBP17.37■□□□□ 0.37
SSRP1-202ENST00000293880 CYP2D7A0A087X1C5 515 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 ZNF18P17022 549 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 BLVRAP53004 296 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 BLMP54132 1417 aaPredicted RBP17.37■□□□□ 0.37
SSRP1-202ENST00000293880 DNAJC24Q6P3W2 148 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 MAP7D3Q8IWC1 876 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 AIFM3Q96NN9 605 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 TRPV6Q9H1D0 765 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 CTTNQ14247 550 aaKnown RBP17.37■□□□□ 0.37
SSRP1-202ENST00000293880 ABCB5Q2M3G0 1257 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 NSUN7Q8NE18 718 aaKnown RBP17.37■□□□□ 0.37
SSRP1-202ENST00000293880 PAGE5Q96GU1 130 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 ACCSQ96QU6 501 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 EPC1Q9H2F5 836 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 KDM5AP29375 1690 aaKnown RBP17.37■□□□□ 0.37
SSRP1-202ENST00000293880 SUPT3HO75486 399 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 TRIM37O94972 964 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 LTKP29376 864 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 NKX1-1Q15270 411 aaPredicted RBP17.37■□□□□ 0.37
SSRP1-202ENST00000293880 FAM160B1Q5W0V3 765 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 PASD1Q8IV76 773 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 HEXIM2Q96MH2 286 aaKnown RBP17.37■□□□□ 0.37
SSRP1-202ENST00000293880 CSADQ9Y600 493 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 EDC4Q6P2E9 1401 aaKnown RBP17.37■□□□□ 0.37
SSRP1-202ENST00000293880 QTRT2Q9H974 415 aaKnown RBP17.37■□□□□ 0.37
SSRP1-202ENST00000293880 SPC25Q9HBM1 224 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 CASP1P29466 404 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms