RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 KAZNQ674X7 775 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 CYB5R4Q7L1T6 521 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 RPUSD2Q8IZ73 545 aaKnown RBP13.85□□□□□ -0.19
PTCD1-201ENST00000292478 NEK9Q8TD19 979 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 PLA2G12BQ9BX93 195 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 PXDNLA1KZ92 1463 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 CCDC188H7C350 402 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 INHBAP08476 426 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 CYP19A1P11511 503 aaPredicted RBP13.85□□□□□ -0.19
PTCD1-201ENST00000292478 CUL1Q13616 776 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 FAM20AQ96MK3 541 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 ERCC6L2Q5T890 1561 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 MEIS1O00470 390 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 HIP1RO75146 1068 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 ASNSP08243 561 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 CACNB1Q02641 598 aaPredicted RBP13.85□□□□□ -0.19
PTCD1-201ENST00000292478 TMEM47Q9BQJ4 181 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 CEP72Q9P209 647 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 LGALS16A8MUM7 142 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 OATP04181 439 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 NAA35Q5VZE5 725 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 DNAJC24Q6P3W2 148 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 EEF2KMTQ96G04 330 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 DLC1Q96QB1 1528 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 SGK1O00141 431 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 PTPROQ16827 1216 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 RABL6Q3YEC7 729 aaPredicted RBP13.85□□□□□ -0.19
PTCD1-201ENST00000292478 DPP9Q86TI2 863 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 NME8Q8N427 588 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 CCDC197Q8NCU1 140 aa13.85□□□□□ -0.19
PTCD1-201ENST00000292478 UTYO14607 1347 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 CPDO75976 1380 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 HGSO14964 777 aaPredicted RBP13.84□□□□□ -0.19
PTCD1-201ENST00000292478 ZWINTO95229 277 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 CDC25AP30304 524 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 YWHAGP61981 247 aaKnown RBP eCLIP13.84□□□□□ -0.19
PTCD1-201ENST00000292478 RPS6KA2Q15349 733 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 KIAA1586Q9HCI6 787 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 INO80B-WBP1J3KQ70 363 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 MCF2LO15068 1137 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 ORC4O43929 436 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 SORBS3O60504 671 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 ARHGEF18Q6ZSZ5 1173 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 INO80BQ9C086 356 aaPredicted RBP13.84□□□□□ -0.19
PTCD1-201ENST00000292478 OSBPL5Q9H0X9 879 aaPredicted RBP13.84□□□□□ -0.19
PTCD1-201ENST00000292478 ANAPC5Q9UJX4 755 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 AKT3Q9Y243 479 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 IGBP1P78318 339 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 CIAPIN1Q6FI81 312 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 PODNQ7Z5L7 613 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 PARD6BQ9BYG5 372 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 PCIF1Q9H4Z3 704 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 SCINQ9Y6U3 715 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 MROH7-TTC4A0A0A0MT08 1334 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 ANO9A1A5B4 782 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 SH3BGRP55822 239 aaPredicted RBP13.84□□□□□ -0.19
PTCD1-201ENST00000292478 FOXO4P98177 505 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 EMBQ6PCB8 327 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 SNX25Q9H3E2 840 aa13.84□□□□□ -0.19
PTCD1-201ENST00000292478 DCP1AQ9NPI6 582 aaPredicted RBP13.84□□□□□ -0.19
PTCD1-201ENST00000292478 CUL4BQ13620 913 aa13.83□□□□□ -0.19
PTCD1-201ENST00000292478 TTBK2Q6IQ55 1244 aa13.83□□□□□ -0.19
PTCD1-201ENST00000292478 SEPT14Q6ZU15 432 aa13.83□□□□□ -0.19
PTCD1-201ENST00000292478 BBS5Q8N3I7 341 aa13.83□□□□□ -0.19
PTCD1-201ENST00000292478 ENAHQ8N8S7 591 aaPredicted RBP13.83□□□□□ -0.19
PTCD1-201ENST00000292478 RAD54LQ92698 747 aa13.83□□□□□ -0.19
PTCD1-201ENST00000292478 NCAPGQ9BPX3 1015 aa13.83□□□□□ -0.19
PTCD1-201ENST00000292478 AP5M1Q9H0R1 490 aa13.83□□□□□ -0.19
PTCD1-201ENST00000292478 FEM1BQ9UK73 627 aa13.83□□□□□ -0.19
PTCD1-201ENST00000292478 PCDHA6Q9UN73 950 aa13.83□□□□□ -0.19
PTCD1-201ENST00000292478 FAN1Q9Y2M0 1017 aa13.83□□□□□ -0.19
PTCD1-201ENST00000292478 PCDHA8Q9Y5H6 950 aa13.83□□□□□ -0.19
PTCD1-201ENST00000292478 PTPRUQ92729 1446 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 KRT1P04264 644 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 RXRBP28702 533 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 MYO1EQ12965 1108 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 MUM1L1Q5H9M0 696 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 METTL23Q86XA0 190 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 TCP11Q8WWU5 503 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 EXOC4Q96A65 974 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 PPP1R12CQ9BZL4 782 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 ARHGEF40Q8TER5 1519 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 LRRN2O75325 713 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 ATP1A3P13637 1013 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 C2orf54Q08AI8 447 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 ASPHQ12797 758 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 SPOUT1Q5T280 376 aaKnown RBP13.83□□□□□ -0.2
PTCD1-201ENST00000292478 SEPT10Q9P0V9 454 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 PTPN22Q9Y2R2 807 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 CRKP46108 304 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 GIMAP8Q8ND71 665 aaPredicted RBP13.83□□□□□ -0.2
PTCD1-201ENST00000292478 CCDC68Q9H2F9 335 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 CD209Q9NNX6 404 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 AXIN2Q9Y2T1 843 aa13.83□□□□□ -0.2
PTCD1-201ENST00000292478 RCSD1Q6JBY9 416 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 ALKBH5Q6P6C2 394 aaKnown RBP13.82□□□□□ -0.2
PTCD1-201ENST00000292478 TBC1D22BQ9NU19 505 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 MAD1L1Q9Y6D9 718 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 MIF4GDA9UHW6 222 aaKnown RBP13.82□□□□□ -0.2
PTCD1-201ENST00000292478 PRELPP51888 382 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms