RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 PSTPIP2Q9H939 334 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 ABCB6Q9NP58 842 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 S100BP04271 92 aaPredicted RBP11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 BPIFB4P59827 614 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 ZNF653Q96CK0 615 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 POLR3CQ9BUI4 534 aaPredicted RBP11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 ADGRB2O60241 1585 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 LOC102724428A0A0B4J2F2 783 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 GOLGA8CPA6NN73 597 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 ACTN1P12814 892 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 GSPT1P15170 499 aaKnown RBP11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 SIK1P57059 783 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 PCGF5Q86SE9 256 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 TLK1Q9UKI8 766 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 EXOC1LA0A1B0GW35 172 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 PRAMEF22A3QJZ6 481 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 M0QZ92 97 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 SCG2P13521 617 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 MAPK4P31152 587 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 METTL13Q8N6R0 699 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 PIGBQ92521 554 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 SERPINI1Q99574 410 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 ELAC2Q9BQ52 826 aaKnown RBP11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 AFF2P51816 1311 aa11.6□□□□□ -0.55
PKNOX1-201ENST00000291547 TESPA1A2RU30 521 aaPredicted RBP11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 IKBKBO14920 756 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 NVLO15381 856 aaKnown RBP11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 IFRD2Q12894 506 aaPredicted RBP11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 PROSER3Q2NL68 480 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 RETREG2Q8NC44 543 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 UPF3AQ9H1J1 476 aaKnown RBP11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 ZMYM6O95789 1325 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 LONP1P36776 959 aaKnown RBP11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 C11orf57Q6ZUT1 292 aaPredicted RBP11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 DYDC2Q96IM9 177 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 NT5C1BQ96P26 610 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 ZSCAN10Q96SZ4 725 aaPredicted RBP11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 TRAIPQ9BWF2 469 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 RTEL1Q9NZ71 1219 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 PLEKHG2Q9H7P9 1386 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 HEG1Q9ULI3 1381 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 MAPK13O15264 365 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 MAN1A2O60476 641 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 PRPSAP1Q14558 356 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 ATG16L1Q676U5 607 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 FAM186BQ8IYM0 893 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 MAML1Q92585 1016 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 MAP2P11137 1827 aaKnown RBP11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 TNKSO95271 1327 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 NEURL1BA8MQ27 555 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 KRT10P13645 584 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 MFAP3P55082 362 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 BASP1P80723 227 aaKnown RBP11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 CYP4A11Q02928 519 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 PDCLQ13371 301 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 TTLL7Q6ZT98 887 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 DNAAF3Q8N9W5 541 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 RNF169Q8NCN4 708 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 GPKOWQ92917 476 aaPredicted RBP eCLIP11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 FMO2Q99518 471 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 FGFR1OP2Q9NVK5 253 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 WARS2Q9UGM6 360 aaKnown RBP11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 SPATA31A6Q5VVP1 1343 aa11.59□□□□□ -0.55
PKNOX1-201ENST00000291547 A0A087WWV3 80 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 SPAG7O75391 227 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 MOCS3O95396 460 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 HSPA6P17066 643 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 NR2F2P24468 414 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 EIF3BP55884 814 aaKnown RBP11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 MYL7Q01449 175 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 OCA2Q04671 838 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 SLC39A14Q15043 492 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 SPOPLQ6IQ16 392 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 SLFN12Q8IYM2 578 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 PNMA1Q8ND90 353 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 CHCHD3Q9NX63 227 aaKnown RBP11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 GJA3Q9Y6H8 435 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 CPDO75976 1380 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 H0YCG3 227 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 SLC7A5Q01650 507 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 DEUP1Q05D60 604 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 TCIRG1Q13488 830 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 SMYD4Q8IYR2 804 aaPredicted RBP11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 DISC1Q9NRI5 854 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 ETAA1Q9NY74 926 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 ARPP21Q9UBL0 812 aaPredicted RBP11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 NRXN3Q9Y4C0 1643 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 SSH2Q76I76 1423 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 SOWAHDA6NJG2 315 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 KLRF2D3W0D1 207 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 PSEN1P49768 467 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 ODR4Q5SWX8 454 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 SARM1Q6SZW1 724 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 SYT2Q8N9I0 419 aaPredicted RBP11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 CHURC1Q8WUH1 139 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 ADPGKQ9BRR6 497 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 SPDYE2BA6NHP3 402 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms