RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 NHEJ1Q9H9Q4 299 aaPredicted RBP21.12■□□□□ 0.97
SHF-201ENST00000290894 PHF20L1A8MW92 1017 aa21.12■□□□□ 0.97
SHF-201ENST00000290894 CYP3A4P08684 503 aa21.12■□□□□ 0.97
SHF-201ENST00000290894 ARP10275 920 aa21.12■□□□□ 0.97
SHF-201ENST00000290894 PRAMEF18Q5VWM3 479 aa21.12■□□□□ 0.97
SHF-201ENST00000290894 SYT2Q8N9I0 419 aaPredicted RBP21.12■□□□□ 0.97
SHF-201ENST00000290894 NUP58Q9BVL2 599 aa21.12■□□□□ 0.97
SHF-201ENST00000290894 ZNHIT6Q9NWK9 470 aaKnown RBP21.12■□□□□ 0.97
SHF-201ENST00000290894 CCPG1Q9ULG6 757 aa21.12■□□□□ 0.97
SHF-201ENST00000290894 COL4A3BPQ9Y5P4 624 aa21.12■□□□□ 0.97
SHF-201ENST00000290894 NFIBO00712 420 aa21.11■□□□□ 0.97
SHF-201ENST00000290894 FGFR1OPO95684 399 aaKnown RBP21.11■□□□□ 0.97
SHF-201ENST00000290894 RASSF7Q02833 373 aa21.11■□□□□ 0.97
SHF-201ENST00000290894 TEX35Q5T0J7 233 aa21.11■□□□□ 0.97
SHF-201ENST00000290894 KRT26Q7Z3Y9 468 aa21.11■□□□□ 0.97
SHF-201ENST00000290894 PUF60Q9UHX1 559 aaKnown RBP21.11■□□□□ 0.97
SHF-201ENST00000290894 RCCD1A6NED2 376 aa21.11■□□□□ 0.97
SHF-201ENST00000290894 PRPF6O94906 941 aaKnown RBP21.11■□□□□ 0.97
SHF-201ENST00000290894 MYBP10242 640 aa21.11■□□□□ 0.97
SHF-201ENST00000290894 OTOP1Q7RTM1 612 aa21.11■□□□□ 0.97
SHF-201ENST00000290894 ZNF397Q8NF99 534 aaPredicted RBP21.11■□□□□ 0.97
SHF-201ENST00000290894 DYDC2Q96IM9 177 aa21.11■□□□□ 0.97
SHF-201ENST00000290894 IKZF4Q9H2S9 585 aa21.11■□□□□ 0.97
SHF-201ENST00000290894 KCTD10Q9H3F6 313 aa21.11■□□□□ 0.97
SHF-201ENST00000290894 SH2D4AQ9H788 454 aa21.11■□□□□ 0.97
SHF-201ENST00000290894 MRPL11Q9Y3B7 192 aaKnown RBP21.11■□□□□ 0.97
SHF-201ENST00000290894 KCNA1Q09470 495 aa21.1■□□□□ 0.97
SHF-201ENST00000290894 MEA1Q16626 185 aa21.1■□□□□ 0.97
SHF-201ENST00000290894 TEPSINQ96N21 525 aa21.1■□□□□ 0.97
SHF-201ENST00000290894 FEM1BQ9UK73 627 aa21.1■□□□□ 0.97
SHF-201ENST00000290894 RABGAP1Q9Y3P9 1069 aa21.1■□□□□ 0.97
SHF-201ENST00000290894 DUSP10Q9Y6W6 482 aa21.1■□□□□ 0.97
SHF-201ENST00000290894 KIF13BQ9NQT8 1826 aa21.1■□□□□ 0.97
SHF-201ENST00000290894 GAS7O60861 476 aa21.1■□□□□ 0.97
SHF-201ENST00000290894 ADAM9Q13443 819 aa21.1■□□□□ 0.97
SHF-201ENST00000290894 RRAGAQ7L523 313 aa21.1■□□□□ 0.97
SHF-201ENST00000290894 MICALL2Q8IY33 904 aa21.1■□□□□ 0.97
SHF-201ENST00000290894 RETREG2Q8NC44 543 aa21.1■□□□□ 0.97
SHF-201ENST00000290894 HOOK2Q96ED9 719 aa21.1■□□□□ 0.97
SHF-201ENST00000290894 COL20A1Q9P218 1284 aa21.1■□□□□ 0.97
SHF-201ENST00000290894 ENC1O14682 589 aa21.09■□□□□ 0.97
SHF-201ENST00000290894 CEP55Q53EZ4 464 aa21.09■□□□□ 0.97
SHF-201ENST00000290894 KIAA1328Q86T90 577 aa21.09■□□□□ 0.97
SHF-201ENST00000290894 LACRTQ9GZZ8 138 aa21.09■□□□□ 0.97
SHF-201ENST00000290894 NLRC4Q9NPP4 1024 aa21.09■□□□□ 0.97
SHF-201ENST00000290894 ZNF536O15090 1300 aa21.09■□□□□ 0.97
SHF-201ENST00000290894 FRMD3A2A2Y4 597 aa21.09■□□□□ 0.97
SHF-201ENST00000290894 CTAGE9A4FU28 777 aa21.09■□□□□ 0.97
SHF-201ENST00000290894 SLITRK3O94933 977 aa21.09■□□□□ 0.97
SHF-201ENST00000290894 GMPSP49915 693 aaPredicted RBP21.09■□□□□ 0.97
SHF-201ENST00000290894 TGFB2P61812 414 aa21.09■□□□□ 0.97
SHF-201ENST00000290894 CCDC122Q5T0U0 273 aa21.09■□□□□ 0.97
SHF-201ENST00000290894 TRMT1LQ7Z2T5 733 aaKnown RBP21.09■□□□□ 0.97
SHF-201ENST00000290894 FAM160B2Q86V87 743 aa21.09■□□□□ 0.97
SHF-201ENST00000290894 ZNF577Q9BSK1 485 aa21.09■□□□□ 0.97
SHF-201ENST00000290894 RAVER2Q9HCJ3 691 aaKnown RBP21.09■□□□□ 0.97
SHF-201ENST00000290894 WRAP73Q9P2S5 460 aaPredicted RBP21.09■□□□□ 0.97
SHF-201ENST00000290894 LRRC53A6NM62 1247 aa21.08■□□□□ 0.97
SHF-201ENST00000290894 PSMD10O75832 226 aa21.08■□□□□ 0.97
SHF-201ENST00000290894 ALAS1P13196 640 aa21.08■□□□□ 0.97
SHF-201ENST00000290894 HOXD13P35453 343 aa21.08■□□□□ 0.97
SHF-201ENST00000290894 KCNMA1Q12791 1236 aa21.08■□□□□ 0.97
SHF-201ENST00000290894 IL31RAQ8NI17 732 aa21.08■□□□□ 0.97
SHF-201ENST00000290894 HSD17B14Q9BPX1 270 aa21.08■□□□□ 0.97
SHF-201ENST00000290894 VPS33BQ9H267 617 aa21.08■□□□□ 0.97
SHF-201ENST00000290894 PITPNM2Q9BZ72 1349 aa21.08■□□□□ 0.96
SHF-201ENST00000290894 EFCAB8A8MWE9 144 aa21.08■□□□□ 0.96
SHF-201ENST00000290894 NR2F2P24468 414 aa21.08■□□□□ 0.96
SHF-201ENST00000290894 PTGER2P43116 358 aa21.07■□□□□ 0.96
SHF-201ENST00000290894 NBPF12Q5TAG4 269 aaPredicted RBP21.07■□□□□ 0.96
SHF-201ENST00000290894 ZNF446Q9NWS9 450 aa21.07■□□□□ 0.96
SHF-201ENST00000290894 ARHGAP20Q9P2F6 1191 aa21.07■□□□□ 0.96
SHF-201ENST00000290894 ATAD5Q96QE3 1844 aa21.07■□□□□ 0.96
SHF-201ENST00000290894 ZNF263O14978 683 aa21.07■□□□□ 0.96
SHF-201ENST00000290894 GCNT3O95395 438 aa21.07■□□□□ 0.96
SHF-201ENST00000290894 PRELPP51888 382 aa21.07■□□□□ 0.96
SHF-201ENST00000290894 MTMR2Q13614 643 aa21.07■□□□□ 0.96
SHF-201ENST00000290894 TNIP1Q15025 636 aa21.07■□□□□ 0.96
SHF-201ENST00000290894 RINT1Q6NUQ1 792 aa21.07■□□□□ 0.96
SHF-201ENST00000290894 KSR1Q8IVT5 923 aa21.07■□□□□ 0.96
SHF-201ENST00000290894 BANK1Q8NDB2 785 aa21.07■□□□□ 0.96
SHF-201ENST00000290894 UNC45AQ9H3U1 944 aa21.07■□□□□ 0.96
SHF-201ENST00000290894 HDAC6Q9UBN7 1215 aa21.07■□□□□ 0.96
SHF-201ENST00000290894 HACL1Q9UJ83 578 aa21.07■□□□□ 0.96
SHF-201ENST00000290894 FER1L6Q2WGJ9 1857 aa21.06■□□□□ 0.96
SHF-201ENST00000290894 TBCAO75347 108 aaKnown RBP21.06■□□□□ 0.96
SHF-201ENST00000290894 FLOT1O75955 427 aa21.06■□□□□ 0.96
SHF-201ENST00000290894 CLCN6P51797 869 aa21.06■□□□□ 0.96
SHF-201ENST00000290894 TRAF1Q13077 416 aa21.06■□□□□ 0.96
SHF-201ENST00000290894 SLC5A5Q92911 643 aa21.06■□□□□ 0.96
SHF-201ENST00000290894 CCDC42Q96M95 316 aa21.06■□□□□ 0.96
SHF-201ENST00000290894 POLR3CQ9BUI4 534 aaPredicted RBP21.06■□□□□ 0.96
SHF-201ENST00000290894 DEFB129Q9H1M3 183 aa21.06■□□□□ 0.96
SHF-201ENST00000290894 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.06■□□□□ 0.96
SHF-201ENST00000290894 A0A1W2PQJ5 194 aa21.06■□□□□ 0.96
SHF-201ENST00000290894 MACROD2A1Z1Q3 448 aa21.06■□□□□ 0.96
SHF-201ENST00000290894 ICAM1P05362 532 aa21.06■□□□□ 0.96
SHF-201ENST00000290894 ITGB5P18084 799 aa21.06■□□□□ 0.96
SHF-201ENST00000290894 CYLC1P35663 651 aaPredicted RBP21.06■□□□□ 0.96
SHF-201ENST00000290894 MAP3K10Q02779 954 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms