RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 TRIP12Q14669 1992 aaPredicted RBP11.98□□□□□ -0.49
SNF8-201ENST00000290330 ABHD14A-ACY1A0A1B0GW23 586 aa11.97□□□□□ -0.49
SNF8-201ENST00000290330 GSTTP1A0A1W2PQM5 241 aa11.97□□□□□ -0.49
SNF8-201ENST00000290330 RSPH10B2B2RC85 870 aa11.97□□□□□ -0.49
SNF8-201ENST00000290330 EPB41L2O43491 1005 aaKnown RBP11.97□□□□□ -0.49
SNF8-201ENST00000290330 CA3P07451 260 aa11.97□□□□□ -0.49
SNF8-201ENST00000290330 RSPH10BP0C881 870 aa11.97□□□□□ -0.49
SNF8-201ENST00000290330 GNAT1P11488 350 aa11.97□□□□□ -0.49
SNF8-201ENST00000290330 PSMA5P28066 241 aa11.97□□□□□ -0.49
SNF8-201ENST00000290330 THPOP40225 353 aa11.97□□□□□ -0.49
SNF8-201ENST00000290330 KCNJ6P48051 423 aa11.97□□□□□ -0.49
SNF8-201ENST00000290330 CLK2P49760 499 aaKnown RBP11.97□□□□□ -0.49
SNF8-201ENST00000290330 WDR5P61964 334 aaKnown RBP11.97□□□□□ -0.49
SNF8-201ENST00000290330 ADAM17P78536 824 aa11.97□□□□□ -0.49
SNF8-201ENST00000290330 PFKFB3Q16875 520 aaPredicted RBP11.97□□□□□ -0.49
SNF8-201ENST00000290330 USP38Q8NB14 1042 aa11.97□□□□□ -0.49
SNF8-201ENST00000290330 CYP2W1Q8TAV3 490 aa11.97□□□□□ -0.49
SNF8-201ENST00000290330 ANO3Q9BYT9 981 aa11.97□□□□□ -0.49
SNF8-201ENST00000290330 GLT8D2Q9H1C3 349 aa11.97□□□□□ -0.49
SNF8-201ENST00000290330 KCNH7Q9NS40 1196 aa11.97□□□□□ -0.49
SNF8-201ENST00000290330 TMEM260Q9NX78 707 aa11.97□□□□□ -0.49
SNF8-201ENST00000290330 PKD2L1Q9P0L9 805 aa11.97□□□□□ -0.49
SNF8-201ENST00000290330 NID2Q14112 1375 aa11.96□□□□□ -0.49
SNF8-201ENST00000290330 NRCAMQ92823 1304 aa11.96□□□□□ -0.49
SNF8-201ENST00000290330 KIF28PB7ZC32 967 aa11.96□□□□□ -0.49
SNF8-201ENST00000290330 CAND2O75155 1236 aa11.96□□□□□ -0.49
SNF8-201ENST00000290330 LGR5O75473 907 aa11.96□□□□□ -0.49
SNF8-201ENST00000290330 SCG2P13521 617 aa11.96□□□□□ -0.49
SNF8-201ENST00000290330 SREBF1P36956 1147 aa11.96□□□□□ -0.49
SNF8-201ENST00000290330 EVCP57679 992 aa11.96□□□□□ -0.49
SNF8-201ENST00000290330 DEFB103AP81534 67 aa11.96□□□□□ -0.49
SNF8-201ENST00000290330 AP3B2Q13367 1082 aa11.96□□□□□ -0.49
SNF8-201ENST00000290330 IKBKEQ14164 716 aa11.96□□□□□ -0.49
SNF8-201ENST00000290330 PKN1Q16512 942 aa11.96□□□□□ -0.49
SNF8-201ENST00000290330 LMBR1Q8WVP7 490 aa11.96□□□□□ -0.49
SNF8-201ENST00000290330 RBM19Q9Y4C8 960 aaKnown RBP11.96□□□□□ -0.49
SNF8-201ENST00000290330 EMSYQ7Z589 1322 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 ESYT2A0FGR8 921 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 MEIS1O00470 390 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 PRPF3O43395 683 aaKnown RBP11.95□□□□□ -0.5
SNF8-201ENST00000290330 TLL1O43897 1013 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 EFCAB14O75071 495 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 ARHGEF15O94989 841 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 ARP10275 920 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 IGFBP4P22692 258 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 ARHGAP4P98171 946 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 TAP1Q03518 808 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 NTRK3Q16288 839 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 CEP55Q53EZ4 464 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 PLEKHG4Q58EX7 1191 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 RUFY3Q7L099 469 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 TMCO2Q7Z6W1 182 aaPredicted RBP11.95□□□□□ -0.5
SNF8-201ENST00000290330 DBF4BQ8NFT6 615 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 GLG1Q92896 1179 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 ZMYND12Q9H0C1 365 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 SMARCAD1Q9H4L7 1026 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 ZSWIM6Q9HCJ5 1215 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 JPH1Q9HDC5 661 aaPredicted RBP11.95□□□□□ -0.5
SNF8-201ENST00000290330 ERAP1Q9NZ08 941 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 GBF1Q92538 1859 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 DOCK5Q9H7D0 1870 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 EYSQ5T1H1 3165 aa11.95□□□□□ -0.5
SNF8-201ENST00000290330 NFASCO94856 1347 aa11.94□□□□□ -0.5
SNF8-201ENST00000290330 ADAMTS3O15072 1205 aa11.94□□□□□ -0.5
SNF8-201ENST00000290330 CTSHP09668 335 aa11.94□□□□□ -0.5
SNF8-201ENST00000290330 MARK3P27448 753 aa11.94□□□□□ -0.5
SNF8-201ENST00000290330 PDIA3P30101 505 aaKnown RBP11.94□□□□□ -0.5
SNF8-201ENST00000290330 MKRN4PQ13434 485 aaPredicted RBP11.94□□□□□ -0.5
SNF8-201ENST00000290330 JAKMIP3Q5VZ66 844 aa11.94□□□□□ -0.5
SNF8-201ENST00000290330 CRYGNQ8WXF5 182 aa11.94□□□□□ -0.5
SNF8-201ENST00000290330 PPM1EQ8WY54 764 aa11.94□□□□□ -0.5
SNF8-201ENST00000290330 PHKBQ93100 1093 aa11.94□□□□□ -0.5
SNF8-201ENST00000290330 PCYT2Q99447 389 aa11.94□□□□□ -0.5
SNF8-201ENST00000290330 SDF4Q9BRK5 362 aa11.94□□□□□ -0.5
SNF8-201ENST00000290330 COL25A1Q9BXS0 654 aaPredicted RBP11.94□□□□□ -0.5
SNF8-201ENST00000290330 OSBPL7Q9BZF2 842 aa11.94□□□□□ -0.5
SNF8-201ENST00000290330 CERS4Q9HA82 394 aa11.94□□□□□ -0.5
SNF8-201ENST00000290330 AGO4Q9HCK5 861 aaKnown RBP11.94□□□□□ -0.5
SNF8-201ENST00000290330 SLC9A2Q9UBY0 812 aa11.94□□□□□ -0.5
SNF8-201ENST00000290330 LCHNA4D1U4 455 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 MBLAC1A4D2B0 266 aaPredicted RBP11.93□□□□□ -0.5
SNF8-201ENST00000290330 FAM86B1E9PN63 330 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 RFXAPO00287 272 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 PPFIA3O75145 1194 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 GJB5O95377 273 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 FAM86B2P0C5J1 330 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 IFNAR1P17181 557 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 ZNF76P36508 570 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 ACTR2P61160 394 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 CCT2P78371 535 aaKnown RBP11.93□□□□□ -0.5
SNF8-201ENST00000290330 PPFIA1Q13136 1202 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 ITGB3BPQ13352 177 aaPredicted RBP11.93□□□□□ -0.5
SNF8-201ENST00000290330 TOB2Q14106 344 aaPredicted RBP11.93□□□□□ -0.5
SNF8-201ENST00000290330 GRIK4Q16099 956 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 FAM26DQ5JW98 314 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 MARCH8Q5T0T0 291 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 TAF2Q6P1X5 1199 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.93□□□□□ -0.5
SNF8-201ENST00000290330 RUFY4Q6ZNE9 571 aa11.93□□□□□ -0.5
SNF8-201ENST00000290330 NIPA1Q7RTP0 329 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms