RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 CCPG1Q9ULG6 757 aa21.36■■□□□ 1.01
BRAF-201ENST00000288602 FZD1Q9UP38 647 aa21.36■■□□□ 1.01
BRAF-201ENST00000288602 TFRCP02786 760 aaKnown RBP21.35■■□□□ 1.01
BRAF-201ENST00000288602 PLEKP08567 350 aaPredicted RBP21.35■■□□□ 1.01
BRAF-201ENST00000288602 TNIP1Q15025 636 aa21.35■■□□□ 1.01
BRAF-201ENST00000288602 MICALL2Q8IY33 904 aa21.35■■□□□ 1.01
BRAF-201ENST00000288602 DYDC2Q96IM9 177 aa21.35■■□□□ 1.01
BRAF-201ENST00000288602 NHEJ1Q9H9Q4 299 aaPredicted RBP21.35■■□□□ 1.01
BRAF-201ENST00000288602 PKD2L1Q9P0L9 805 aa21.35■■□□□ 1.01
BRAF-201ENST00000288602 GUCA1BQ9UMX6 200 aa21.35■■□□□ 1.01
BRAF-201ENST00000288602 COL4A3BPQ9Y5P4 624 aa21.35■■□□□ 1.01
BRAF-201ENST00000288602 ZNF536O15090 1300 aa21.35■■□□□ 1.01
BRAF-201ENST00000288602 FRMD3A2A2Y4 597 aa21.35■■□□□ 1.01
BRAF-201ENST00000288602 NFIBO00712 420 aa21.35■■□□□ 1.01
BRAF-201ENST00000288602 POLD1P28340 1107 aa21.35■■□□□ 1.01
BRAF-201ENST00000288602 PTGER2P43116 358 aa21.35■■□□□ 1.01
BRAF-201ENST00000288602 HERVK_113P62684 666 aa21.35■■□□□ 1.01
BRAF-201ENST00000288602 MEA1Q16626 185 aa21.35■■□□□ 1.01
BRAF-201ENST00000288602 PRAMEF18Q5VWM3 479 aa21.35■■□□□ 1.01
BRAF-201ENST00000288602 RETREG2Q8NC44 543 aa21.35■■□□□ 1.01
BRAF-201ENST00000288602 CCDC94Q9BW85 323 aaPredicted RBP21.35■■□□□ 1.01
BRAF-201ENST00000288602 FER1L6Q2WGJ9 1857 aa21.35■■□□□ 1.01
BRAF-201ENST00000288602 PSMD10O75832 226 aa21.34■■□□□ 1.01
BRAF-201ENST00000288602 SLITRK3O94933 977 aa21.34■■□□□ 1.01
BRAF-201ENST00000288602 GMPSP49915 693 aaPredicted RBP21.34■■□□□ 1.01
BRAF-201ENST00000288602 TRAF1Q13077 416 aa21.34■■□□□ 1.01
BRAF-201ENST00000288602 ZSWIM4Q9H7M6 989 aa21.34■■□□□ 1.01
BRAF-201ENST00000288602 COL20A1Q9P218 1284 aa21.34■■□□□ 1.01
BRAF-201ENST00000288602 RABGAP1Q9Y3P9 1069 aa21.34■■□□□ 1.01
BRAF-201ENST00000288602 PITPNM2Q9BZ72 1349 aa21.34■■□□□ 1.01
BRAF-201ENST00000288602 ATAD5Q96QE3 1844 aa21.34■■□□□ 1.01
BRAF-201ENST00000288602 MYBP10242 640 aa21.34■■□□□ 1.01
BRAF-201ENST00000288602 PRELPP51888 382 aa21.34■■□□□ 1.01
BRAF-201ENST00000288602 PPP2R3AQ06190 1150 aa21.34■■□□□ 1.01
BRAF-201ENST00000288602 CEP55Q53EZ4 464 aa21.34■■□□□ 1.01
BRAF-201ENST00000288602 HOOK2Q96ED9 719 aa21.34■■□□□ 1.01
BRAF-201ENST00000288602 ZNHIT6Q9NWK9 470 aaKnown RBP21.34■■□□□ 1.01
BRAF-201ENST00000288602 DDX39AO00148 427 aaKnown RBP21.33■■□□□ 1.01
BRAF-201ENST00000288602 PLA2G6O60733 806 aa21.33■■□□□ 1.01
BRAF-201ENST00000288602 TADA3O75528 432 aa21.33■■□□□ 1.01
BRAF-201ENST00000288602 PRPF6O94906 941 aaKnown RBP21.33■■□□□ 1.01
BRAF-201ENST00000288602 CYP27A1Q02318 531 aa21.33■■□□□ 1.01
BRAF-201ENST00000288602 APBA1Q02410 837 aa21.33■■□□□ 1.01
BRAF-201ENST00000288602 UBXN4Q92575 508 aa21.33■■□□□ 1.01
BRAF-201ENST00000288602 HSD17B14Q9BPX1 270 aa21.33■■□□□ 1.01
BRAF-201ENST00000288602 HACL1Q9UJ83 578 aa21.33■■□□□ 1.01
BRAF-201ENST00000288602 SLC26A4O43511 780 aa21.33■■□□□ 1
BRAF-201ENST00000288602 GAS7O60861 476 aa21.33■■□□□ 1
BRAF-201ENST00000288602 ADAM9Q13443 819 aa21.33■■□□□ 1
BRAF-201ENST00000288602 ZNF577Q9BSK1 485 aa21.33■■□□□ 1
BRAF-201ENST00000288602 POLR3CQ9BUI4 534 aaPredicted RBP21.33■■□□□ 1
BRAF-201ENST00000288602 RAVER2Q9HCJ3 691 aaKnown RBP21.33■■□□□ 1
BRAF-201ENST00000288602 WRAP73Q9P2S5 460 aaPredicted RBP21.33■■□□□ 1
BRAF-201ENST00000288602 HOXD13P35453 343 aa21.32■■□□□ 1
BRAF-201ENST00000288602 ZNF280AP59817 542 aaPredicted RBP21.32■■□□□ 1
BRAF-201ENST00000288602 KCNMA1Q12791 1236 aa21.32■■□□□ 1
BRAF-201ENST00000288602 NBPF12Q5TAG4 269 aaPredicted RBP21.32■■□□□ 1
BRAF-201ENST00000288602 ZNF397Q8NF99 534 aaPredicted RBP21.32■■□□□ 1
BRAF-201ENST00000288602 CRACR2AQ9BSW2 395 aa21.32■■□□□ 1
BRAF-201ENST00000288602 CNOT7Q9UIV1 285 aaKnown RBP21.32■■□□□ 1
BRAF-201ENST00000288602 RCCD1A6NED2 376 aa21.32■■□□□ 1
BRAF-201ENST00000288602 ICAM1P05362 532 aa21.32■■□□□ 1
BRAF-201ENST00000288602 ALAS1P13196 640 aa21.32■■□□□ 1
BRAF-201ENST00000288602 KCNA1Q09470 495 aa21.32■■□□□ 1
BRAF-201ENST00000288602 SLC5A5Q92911 643 aa21.32■■□□□ 1
BRAF-201ENST00000288602 UNC45AQ9H3U1 944 aa21.32■■□□□ 1
BRAF-201ENST00000288602 A0A1W2PQJ5 194 aa21.31■■□□□ 1
BRAF-201ENST00000288602 MTMR2Q13614 643 aa21.31■■□□□ 1
BRAF-201ENST00000288602 FIGNQ5HY92 759 aa21.31■■□□□ 1
BRAF-201ENST00000288602 RINT1Q6NUQ1 792 aa21.31■■□□□ 1
BRAF-201ENST00000288602 RRAGAQ7L523 313 aa21.31■■□□□ 1
BRAF-201ENST00000288602 KRT26Q7Z3Y9 468 aa21.31■■□□□ 1
BRAF-201ENST00000288602 PRPF38AQ8NAV1 312 aaKnown RBP21.31■■□□□ 1
BRAF-201ENST00000288602 IL31RAQ8NI17 732 aa21.31■■□□□ 1
BRAF-201ENST00000288602 DEFB129Q9H1M3 183 aa21.31■■□□□ 1
BRAF-201ENST00000288602 IKZF4Q9H2S9 585 aa21.31■■□□□ 1
BRAF-201ENST00000288602 LRRC53A6NM62 1247 aa21.31■■□□□ 1
BRAF-201ENST00000288602 EYA4O95677 639 aa21.31■■□□□ 1
BRAF-201ENST00000288602 CBX1P83916 185 aa21.31■■□□□ 1
BRAF-201ENST00000288602 DUSP10Q9Y6W6 482 aa21.31■■□□□ 1
BRAF-201ENST00000288602 CTAGE9A4FU28 777 aa21.3■■□□□ 1
BRAF-201ENST00000288602 NR2F2P24468 414 aa21.3■■□□□ 1
BRAF-201ENST00000288602 PPP2R5CQ13362 524 aa21.3■■□□□ 1
BRAF-201ENST00000288602 TNFAIP1Q13829 316 aa21.3■■□□□ 1
BRAF-201ENST00000288602 MUM1L1Q5H9M0 696 aa21.3■■□□□ 1
BRAF-201ENST00000288602 CCDC122Q5T0U0 273 aa21.3■■□□□ 1
BRAF-201ENST00000288602 CLEC4DQ8WXI8 215 aa21.3■■□□□ 1
BRAF-201ENST00000288602 LACRTQ9GZZ8 138 aa21.3■■□□□ 1
BRAF-201ENST00000288602 MTFR1LQ9H019 292 aa21.3■■□□□ 1
BRAF-201ENST00000288602 NLRC4Q9NPP4 1024 aa21.3■■□□□ 1
BRAF-201ENST00000288602 PUF60Q9UHX1 559 aaKnown RBP21.3■■□□□ 1
BRAF-201ENST00000288602 EFCAB8A8MWE9 144 aa21.3■■□□□ 1
BRAF-201ENST00000288602 FLOT1O75955 427 aa21.3■■□□□ 1
BRAF-201ENST00000288602 ITGB5P18084 799 aa21.3■■□□□ 1
BRAF-201ENST00000288602 TEX35Q5T0J7 233 aa21.3■■□□□ 1
BRAF-201ENST00000288602 KIAA1328Q86T90 577 aa21.3■■□□□ 1
BRAF-201ENST00000288602 WDR11Q9BZH6 1224 aa21.3■■□□□ 1
BRAF-201ENST00000288602 ARHGAP20Q9P2F6 1191 aa21.3■■□□□ 1
BRAF-201ENST00000288602 BRCA1P38398 1863 aaKnown RBP21.29■■□□□ 1
BRAF-201ENST00000288602 IPO5O00410 1097 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms