RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 SPC25Q9HBM1 224 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 STARD7Q9NQZ5 370 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 GJB4Q9NTQ9 266 aa10.5□□□□□ -0.73
HMGN1-201ENST00000288344 CHD9Q3L8U1 2897 aa10.49□□□□□ -0.73
HMGN1-201ENST00000288344 FIBPO43427 364 aa10.49□□□□□ -0.73
HMGN1-201ENST00000288344 DEXIO95424 95 aa10.49□□□□□ -0.73
HMGN1-201ENST00000288344 ARP10275 920 aa10.49□□□□□ -0.73
HMGN1-201ENST00000288344 CPT1AP50416 773 aa10.49□□□□□ -0.73
HMGN1-201ENST00000288344 ADCY7P51828 1080 aa10.49□□□□□ -0.73
HMGN1-201ENST00000288344 PSMC6P62333 389 aa10.49□□□□□ -0.73
HMGN1-201ENST00000288344 SSRP1Q08945 709 aaKnown RBP10.49□□□□□ -0.73
HMGN1-201ENST00000288344 STK3Q13188 491 aa10.49□□□□□ -0.73
HMGN1-201ENST00000288344 NIPA1Q7RTP0 329 aa10.49□□□□□ -0.73
HMGN1-201ENST00000288344 NSUN7Q8NE18 718 aaKnown RBP10.49□□□□□ -0.73
HMGN1-201ENST00000288344 TNFRSF25Q93038 417 aa10.49□□□□□ -0.73
HMGN1-201ENST00000288344 MBOAT7Q96N66 472 aa10.49□□□□□ -0.73
HMGN1-201ENST00000288344 GPR20Q99678 358 aa10.49□□□□□ -0.73
HMGN1-201ENST00000288344 MXRA8Q9BRK3 442 aa10.49□□□□□ -0.73
HMGN1-201ENST00000288344 PHF20Q9BVI0 1012 aa10.49□□□□□ -0.73
HMGN1-201ENST00000288344 REPIN1Q9BWE0 567 aaKnown RBP10.49□□□□□ -0.73
HMGN1-201ENST00000288344 ANO3Q9BYT9 981 aa10.49□□□□□ -0.73
HMGN1-201ENST00000288344 VPS54Q9P1Q0 977 aa10.49□□□□□ -0.73
HMGN1-201ENST00000288344 LHX6Q9UPM6 363 aa10.49□□□□□ -0.73
HMGN1-201ENST00000288344 TRIP12Q14669 1992 aaPredicted RBP10.48□□□□□ -0.73
HMGN1-201ENST00000288344 COL6A3P12111 3177 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 CYP3A7-CYP3A51PA0A087WV96 503 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 A0A0U1RQG5 324 aaPredicted RBP10.48□□□□□ -0.73
HMGN1-201ENST00000288344 GSTTP1A0A1W2PQM5 241 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 MAP3K7O43318 606 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 ATG7O95352 703 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 CD2BP2O95400 341 aaKnown RBP10.48□□□□□ -0.73
HMGN1-201ENST00000288344 GGPS1O95749 300 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 F2P00734 622 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 CYP3A7P24462 503 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 FOSBP53539 338 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 ADAM17P78536 824 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 GPNMBQ14956 572 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 NBPF20Q3BBV1 942 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 CEP55Q53EZ4 464 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 NFRKBQ6P4R8 1299 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 METTL7BQ6UX53 244 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 NOL8Q76FK4 1167 aaKnown RBP10.48□□□□□ -0.73
HMGN1-201ENST00000288344 C16orf59Q7L2K0 433 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 PGBD1Q96JS3 809 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 MTG1Q9BT17 334 aaPredicted RBP10.48□□□□□ -0.73
HMGN1-201ENST00000288344 SLKQ9H2G2 1235 aaPredicted RBP10.48□□□□□ -0.73
HMGN1-201ENST00000288344 KCNH7Q9NS40 1196 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 POLR3EQ9NVU0 708 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 ZMYND8Q9ULU4 1186 aaPredicted RBP10.48□□□□□ -0.73
HMGN1-201ENST00000288344 NAP1L2Q9ULW6 460 aaPredicted RBP10.48□□□□□ -0.73
HMGN1-201ENST00000288344 LIMCH1Q9UPQ0 1083 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 MRVI1Q9Y6F6 885 aa10.48□□□□□ -0.73
HMGN1-201ENST00000288344 CHD7Q9P2D1 2997 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 IGKV6D-21A0A0A0MT36 114 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 SPDYE3A6NKU9 549 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 ZEB2O60315 1214 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 B4GALT4O60513 344 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 CLTBP09497 229 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 SYN1P17600 705 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 GNA11P29992 359 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 MAGEA10P43363 369 aaPredicted RBP10.47□□□□□ -0.73
HMGN1-201ENST00000288344 USP11P51784 963 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 EPHB4P54760 987 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 ARHGAP4P98171 946 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 PTPN11Q06124 597 aaPredicted RBP10.47□□□□□ -0.73
HMGN1-201ENST00000288344 ITGB3BPQ13352 177 aaPredicted RBP10.47□□□□□ -0.73
HMGN1-201ENST00000288344 NEDD9Q14511 834 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 JAKMIP3Q5VZ66 844 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 MCTP2Q6DN12 878 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 GALNT17Q6IS24 598 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 B3GNT9Q6UX72 402 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 DHX37Q8IY37 1157 aaKnown RBP10.47□□□□□ -0.73
HMGN1-201ENST00000288344 RASGRP4Q8TDF6 673 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 PCYT2Q99447 389 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 PHOX2BQ99453 314 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 TRPV6Q9H1D0 765 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 AGO4Q9HCK5 861 aaKnown RBP10.47□□□□□ -0.73
HMGN1-201ENST00000288344 C6orf50Q9HD87 102 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 PCDHA4Q9UN74 947 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 ATP11BQ9Y2G3 1177 aa10.47□□□□□ -0.73
HMGN1-201ENST00000288344 NFASCO94856 1347 aa10.46□□□□□ -0.73
HMGN1-201ENST00000288344 JAK2O60674 1132 aa10.46□□□□□ -0.73
HMGN1-201ENST00000288344 LGR5O75473 907 aa10.46□□□□□ -0.73
HMGN1-201ENST00000288344 TIMP1P01033 207 aa10.46□□□□□ -0.73
HMGN1-201ENST00000288344 DGKDQ16760 1214 aa10.46□□□□□ -0.73
HMGN1-201ENST00000288344 GNPTABQ3T906 1256 aa10.46□□□□□ -0.73
HMGN1-201ENST00000288344 EARS2Q5JPH6 523 aaKnown RBP10.46□□□□□ -0.73
HMGN1-201ENST00000288344 HABP4Q5JVS0 413 aaKnown RBP10.46□□□□□ -0.73
HMGN1-201ENST00000288344 TRAF7Q6Q0C0 670 aa10.46□□□□□ -0.73
HMGN1-201ENST00000288344 CYFIP1Q7L576 1253 aa10.46□□□□□ -0.73
HMGN1-201ENST00000288344 REXO1Q8N1G1 1221 aaKnown RBP10.46□□□□□ -0.73
HMGN1-201ENST00000288344 CCDC12Q8WUD4 166 aaPredicted RBP10.46□□□□□ -0.73
HMGN1-201ENST00000288344 SPATA33Q96N06 139 aa10.46□□□□□ -0.73
HMGN1-201ENST00000288344 MROH7Q68CQ1 1323 aa10.45□□□□□ -0.74
HMGN1-201ENST00000288344 A0A1W2PPC1 479 aa10.45□□□□□ -0.74
HMGN1-201ENST00000288344 PQBP1O60828 265 aaKnown RBP10.45□□□□□ -0.74
HMGN1-201ENST00000288344 CCNE2O96020 404 aa10.45□□□□□ -0.74
HMGN1-201ENST00000288344 MYL3P08590 195 aa10.45□□□□□ -0.74
HMGN1-201ENST00000288344 RBL2Q08999 1139 aa10.45□□□□□ -0.74
HMGN1-201ENST00000288344 MTMR1Q13613 665 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms