RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 PHLDB2Q86SQ0 1253 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 AP1M1Q9BXS5 423 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 POTEB3A0JP26 581 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 POTECB2RU33 542 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 H2AFZP0C0S5 128 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 RCAN1P53805 252 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 BIRC3Q13489 604 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 INTS5Q6P9B9 1019 aaKnown RBP13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 POTEBQ6S5H4 581 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 H2AFVQ71UI9 128 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 LRP10Q7Z4F1 713 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 FAM178BQ8IXR5 827 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 MORC4Q8TE76 937 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 MTA3Q9BTC8 594 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 SYNCQ9H7C4 482 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 HDAC9Q9UKV0 1011 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 CD2APQ9Y5K6 639 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 CASQ2O14958 399 aaPredicted RBP13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 TRIM37O94972 964 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 KLHL29Q96CT2 875 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 TRIM9Q9C026 710 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 HOMER3Q9NSC5 361 aa13.68□□□□□ -0.22
SLC6A1-201ENST00000287766 CHUKO15111 745 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 N4BP1O75113 896 aaKnown RBP13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 GFPT2O94808 682 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 RASSF2P50749 326 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 PHLDB3Q6NSJ2 640 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 ADSSL1Q8N142 457 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 LINC00116Q8NCU8 138 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 PIGOQ8TEQ8 1089 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 SREK1Q8WXA9 508 aaKnown RBP13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 BHMT2Q9H2M3 363 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 NFU1Q9UMS0 254 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 EIF4E1BA6NMX2 242 aaKnown RBP13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 KCNJ6P48051 423 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 MAGEF1Q9HAY2 307 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 ARHGEF10LQ9HCE6 1279 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 STK17AQ9UEE5 414 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 AKR1B1P15121 316 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 PDCLQ13371 301 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 PKN1Q16512 942 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 ARHGAP24Q8N264 748 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 DDX27Q96GQ7 796 aaKnown RBP13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 RIOK1Q9BRS2 568 aaKnown RBP13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 NUCKS1Q9H1E3 243 aaKnown RBP13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 ATP2A2P16615 1042 aaKnown RBP13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 ERVK-24P63145 666 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 ZKSCAN8Q15776 578 aaPredicted RBP13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 FAM133BQ5BKY9 247 aaKnown RBP13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 ABTB1Q969K4 478 aaPredicted RBP13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 NCAPGQ9BPX3 1015 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 PCIF1Q9H4Z3 704 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 LIMA1Q9UHB6 759 aaKnown RBP13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 AMFRQ9UKV5 643 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 RABGAP1Q9Y3P9 1069 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 DUSP10Q9Y6W6 482 aa13.67□□□□□ -0.22
SLC6A1-201ENST00000287766 PLA2G4AP47712 749 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 SEC23AQ15436 765 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 CLUL1Q15846 466 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 ODR4Q5SWX8 454 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 AMNQ9BXJ7 453 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 YIPF3Q9GZM5 350 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 TXNDC16Q9P2K2 825 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 NPHP3-ACAD11A0A0J9YXS1 232 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 PPEF1O14829 653 aaPredicted RBP13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 GNA14O95837 355 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 GGCXP38435 758 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 GPSM2P81274 684 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 ABCB5Q2M3G0 1257 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 PROCA1Q8NCQ7 364 aaPredicted RBP13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 CCDC197Q8NCU1 140 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 NKX2-3Q8TAU0 364 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 MXD3Q9BW11 206 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 GLT8D2Q9H1C3 349 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 TSKSQ9UJT2 592 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 BCS1LQ9Y276 419 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 MON2Q7Z3U7 1717 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 POTEFA5A3E0 1075 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 POTEIP0CG38 1075 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 TRAF1Q13077 416 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 CTTNQ14247 550 aaKnown RBP13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 GPATCH4Q5T3I0 446 aaKnown RBP13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 PPP4R3AQ6IN85 833 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 POTEGQ6S5H5 508 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 POTEEQ6S8J3 1075 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 UNC13DQ70J99 1090 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 CFAP61Q8NHU2 1237 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 SH3GLB2Q9NR46 395 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 USTQ9Y2C2 406 aa13.66□□□□□ -0.22
SLC6A1-201ENST00000287766 CTNND1O60716 968 aaKnown RBP13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 PALMO75781 387 aa13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 LUC7L3O95232 432 aaKnown RBP13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 MYL1P05976 194 aa13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 PLEKP08567 350 aaPredicted RBP13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 TRIM65Q6PJ69 517 aa13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 DDX23Q9BUQ8 820 aaKnown RBP13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 FAM205AQ6ZU69 1335 aa13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 NNTQ13423 1086 aa13.65□□□□□ -0.22
SLC6A1-201ENST00000287766 TBC1D1Q86TI0 1168 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms