RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 MAN1B1Q9UKM7 699 aa20.12■□□□□ 0.81
PCDH1-201ENST00000287008 PPP1R18Q6NYC8 613 aa20.12■□□□□ 0.81
PCDH1-201ENST00000287008 ENOX1Q8TC92 643 aaKnown RBP20.12■□□□□ 0.81
PCDH1-201ENST00000287008 ACAD9Q9H845 621 aa20.12■□□□□ 0.81
PCDH1-201ENST00000287008 GSG1L2A8MUP6 293 aa20.12■□□□□ 0.81
PCDH1-201ENST00000287008 MAPK4P31152 587 aa20.12■□□□□ 0.81
PCDH1-201ENST00000287008 COPB2P35606 906 aa20.12■□□□□ 0.81
PCDH1-201ENST00000287008 LRRC63Q05C16 580 aa20.12■□□□□ 0.81
PCDH1-201ENST00000287008 ELMSAN1Q6PJG2 1045 aa20.12■□□□□ 0.81
PCDH1-201ENST00000287008 PPP4R3CPQ6ZMV5 832 aa20.12■□□□□ 0.81
PCDH1-201ENST00000287008 PIGOQ8TEQ8 1089 aa20.12■□□□□ 0.81
PCDH1-201ENST00000287008 SLC38A10Q9HBR0 1119 aa20.12■□□□□ 0.81
PCDH1-201ENST00000287008 TYW1Q9NV66 732 aaKnown RBP20.12■□□□□ 0.81
PCDH1-201ENST00000287008 CNOT7Q9UIV1 285 aaKnown RBP20.12■□□□□ 0.81
PCDH1-201ENST00000287008 CPSF3Q9UKF6 684 aaKnown RBP20.12■□□□□ 0.81
PCDH1-201ENST00000287008 ATP8B3O60423 1300 aa20.12■□□□□ 0.81
PCDH1-201ENST00000287008 RGS16O15492 202 aaPredicted RBP20.11■□□□□ 0.81
PCDH1-201ENST00000287008 QRICH1Q2TAL8 776 aa20.11■□□□□ 0.81
PCDH1-201ENST00000287008 CDC42BPAQ5VT25 1732 aa20.11■□□□□ 0.81
PCDH1-201ENST00000287008 BBOF1Q8ND07 529 aa20.11■□□□□ 0.81
PCDH1-201ENST00000287008 TDRD7Q8NHU6 1098 aaKnown RBP20.11■□□□□ 0.81
PCDH1-201ENST00000287008 MRPL47Q9HD33 250 aaKnown RBP20.11■□□□□ 0.81
PCDH1-201ENST00000287008 GRIN3BO60391 1043 aa20.11■□□□□ 0.81
PCDH1-201ENST00000287008 NMT2O60551 498 aa20.11■□□□□ 0.81
PCDH1-201ENST00000287008 FCER1AP12319 257 aa20.11■□□□□ 0.81
PCDH1-201ENST00000287008 VSIG1Q86XK7 387 aa20.11■□□□□ 0.81
PCDH1-201ENST00000287008 MICALL2Q8IY33 904 aa20.11■□□□□ 0.81
PCDH1-201ENST00000287008 SIX6OS1Q8N1H7 587 aa20.11■□□□□ 0.81
PCDH1-201ENST00000287008 UBE2TQ9NPD8 197 aaPredicted RBP20.11■□□□□ 0.81
PCDH1-201ENST00000287008 WDR19Q8NEZ3 1342 aa20.11■□□□□ 0.81
PCDH1-201ENST00000287008 CD58P19256 250 aa20.11■□□□□ 0.81
PCDH1-201ENST00000287008 DNAJC24Q6P3W2 148 aa20.11■□□□□ 0.81
PCDH1-201ENST00000287008 MICAL1Q8TDZ2 1067 aa20.11■□□□□ 0.81
PCDH1-201ENST00000287008 PLA2G12BQ9BX93 195 aa20.11■□□□□ 0.81
PCDH1-201ENST00000287008 RWDD2AQ9UIY3 292 aa20.11■□□□□ 0.81
PCDH1-201ENST00000287008 IGSF3O75054 1194 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 CIB2O75838 187 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 BARGINQ6ZT62 677 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 PSPC1Q8WXF1 523 aaKnown RBP20.1■□□□□ 0.81
PCDH1-201ENST00000287008 ATP6V0A4Q9HBG4 840 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 PNPLA6Q8IY17 1366 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 LMNB2Q03252 620 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 CUL4BQ13620 913 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 NKX1-1Q15270 411 aaPredicted RBP20.1■□□□□ 0.81
PCDH1-201ENST00000287008 RABL6Q3YEC7 729 aaPredicted RBP20.1■□□□□ 0.81
PCDH1-201ENST00000287008 DPH5Q9H2P9 285 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 STK36Q9NRP7 1315 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 RFX7Q2KHR2 1363 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 ARL4AP40617 200 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 PRELPP51888 382 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 NAA35Q5VZE5 725 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 RNF139Q8WU17 664 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 STMN2Q93045 179 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 CLDN3O15551 220 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 GRM4Q14833 912 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 CYB5R4Q7L1T6 521 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 LRRC8AQ8IWT6 810 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 ZNF34Q8IZ26 560 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 TACC3Q9Y6A5 838 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 MAD1L1Q9Y6D9 718 aa20.1■□□□□ 0.81
PCDH1-201ENST00000287008 GOLGA8IPA6NC78 632 aa20.09■□□□□ 0.81
PCDH1-201ENST00000287008 GOLGA8JA6NMD2 632 aa20.09■□□□□ 0.81
PCDH1-201ENST00000287008 ATF2P15336 505 aa20.09■□□□□ 0.81
PCDH1-201ENST00000287008 CTNNA1P35221 906 aaKnown RBP20.09■□□□□ 0.81
PCDH1-201ENST00000287008 B4GALNT4Q76KP1 1039 aa20.09■□□□□ 0.81
PCDH1-201ENST00000287008 MICALL1Q8N3F8 863 aa20.09■□□□□ 0.81
PCDH1-201ENST00000287008 PPFIBP2Q8ND30 876 aa20.09■□□□□ 0.81
PCDH1-201ENST00000287008 NEK9Q8TD19 979 aa20.09■□□□□ 0.81
PCDH1-201ENST00000287008 TSC1Q92574 1164 aa20.09■□□□□ 0.81
PCDH1-201ENST00000287008 OGFRQ9NZT2 677 aa20.09■□□□□ 0.81
PCDH1-201ENST00000287008 CAMTA2O94983 1202 aa20.09■□□□□ 0.81
PCDH1-201ENST00000287008 PHKA2P46019 1235 aa20.09■□□□□ 0.81
PCDH1-201ENST00000287008 ANKRD20A3Q5VUR7 823 aa20.09■□□□□ 0.81
PCDH1-201ENST00000287008 TWF2Q6IBS0 349 aaKnown RBP20.09■□□□□ 0.81
PCDH1-201ENST00000287008 OR6B2Q6IFH4 312 aa20.09■□□□□ 0.81
PCDH1-201ENST00000287008 PAGE5Q96GU1 130 aa20.09■□□□□ 0.81
PCDH1-201ENST00000287008 GUCY2FP51841 1108 aa20.09■□□□□ 0.81
PCDH1-201ENST00000287008 PRPSAP1Q14558 356 aa20.09■□□□□ 0.81
PCDH1-201ENST00000287008 TAB3Q8N5C8 712 aaPredicted RBP20.09■□□□□ 0.81
PCDH1-201ENST00000287008 SLC16A10Q8TF71 515 aa20.09■□□□□ 0.81
PCDH1-201ENST00000287008 GDAP1L1Q96MZ0 367 aa20.09■□□□□ 0.81
PCDH1-201ENST00000287008 PASKQ96RG2 1323 aa20.09■□□□□ 0.81
PCDH1-201ENST00000287008 ESYT2A0FGR8 921 aa20.08■□□□□ 0.81
PCDH1-201ENST00000287008 ORC4O43929 436 aa20.08■□□□□ 0.81
PCDH1-201ENST00000287008 GFPT2O94808 682 aa20.08■□□□□ 0.81
PCDH1-201ENST00000287008 AKR1B1P15121 316 aa20.08■□□□□ 0.81
PCDH1-201ENST00000287008 ANXA13P27216 316 aa20.08■□□□□ 0.81
PCDH1-201ENST00000287008 HMGCS2P54868 508 aa20.08■□□□□ 0.81
PCDH1-201ENST00000287008 ZNF667Q5HYK9 610 aa20.08■□□□□ 0.81
PCDH1-201ENST00000287008 IPO11Q9UI26 975 aaKnown RBP20.08■□□□□ 0.81
PCDH1-201ENST00000287008 PHLPP2Q6ZVD8 1323 aa20.08■□□□□ 0.81
PCDH1-201ENST00000287008 POTEMA6NI47 508 aa20.08■□□□□ 0.81
PCDH1-201ENST00000287008 SFI1A8K8P3 1242 aa20.08■□□□□ 0.81
PCDH1-201ENST00000287008 SFNP31947 248 aa20.08■□□□□ 0.81
PCDH1-201ENST00000287008 TTBK2Q6IQ55 1244 aa20.08■□□□□ 0.81
PCDH1-201ENST00000287008 RFX6Q8HWS3 928 aa20.08■□□□□ 0.81
PCDH1-201ENST00000287008 MAGOHBQ96A72 148 aaKnown RBP20.08■□□□□ 0.81
PCDH1-201ENST00000287008 PNPLA7Q6ZV29 1317 aa20.08■□□□□ 0.8
PCDH1-201ENST00000287008 SCARF1Q14162 830 aa20.08■□□□□ 0.8
PCDH1-201ENST00000287008 MFSD14CQ5VZR4 134 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms