RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 SPAG1Q07617 926 aa9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 TMEM62Q0P6H9 643 aa9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 FKBP1CQ5VVH2 108 aa9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 FAM114A1Q8IWE2 563 aa9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 ZNF713Q8N859 430 aaPredicted RBP9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 FAM49AQ9H0Q0 323 aaPredicted RBP9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 IKZF4Q9H2S9 585 aa9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 PUF60Q9UHX1 559 aaKnown RBP9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 TEX33O43247 280 aa9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 EXOC3O60645 756 aa9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 ATP9AO75110 1047 aa9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 CD44P16070 742 aaKnown RBP9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 SSR1P43307 286 aaKnown RBP9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 HS1BP3Q53T59 392 aa9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 MYOCDQ8IZQ8 938 aa9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 ELMO3Q96BJ8 720 aa9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 CTAGE1Q96RT6 745 aa9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 VPS33BQ9H267 617 aa9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 V9GYY5 206 aaPredicted RBP9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 KCNJ18B7U540 433 aa9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 DLATP10515 647 aaKnown RBP9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 KCNJ12Q14500 433 aa9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 STXBP2Q15833 593 aa9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 VPS36Q86VN1 386 aa9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 NLRP4Q96MN2 994 aa9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 TRIM9Q9C026 710 aa9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 RNF216Q9NWF9 866 aaPredicted RBP9.98□□□□□ -0.81
CCDC144B-201ENST00000285176 PHF20L1A8MW92 1017 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 GGPS1O95749 300 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 RBM46Q8TBY0 533 aaKnown RBP9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 COPS5Q92905 334 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 LRRC27Q9C0I9 530 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 MYO6Q9UM54 1294 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 MYH1P12882 1939 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 SPDYE16A6NNV3 312 aaPredicted RBP9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 SNHG28P0DPA3 235 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 LY6KQ17RY6 165 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 PRAMEF19Q5SWL8 479 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 HAS1Q92839 578 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 PRIMPOLQ96LW4 560 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 GSDMAQ96QA5 445 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 SPAG5Q96R06 1193 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 MPHOSPH6Q99547 160 aaKnown RBP9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 SPATC1LQ9H0A9 340 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 SNCAIPQ9Y6H5 919 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 BCORQ6W2J9 1755 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 LAMB2P55268 1798 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 CSPG5O95196 566 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 GRB10Q13322 594 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 ADAM9Q13443 819 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 ECM1Q16610 540 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 IQCEQ6IPM2 695 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 DHX40Q8IX18 779 aaKnown RBP9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 TMEM143Q96AN5 459 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 ZBTB10Q96DT7 871 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 WDR18Q9BV38 432 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 UNC45AQ9H3U1 944 aa9.97□□□□□ -0.81
CCDC144B-201ENST00000285176 LAD1O00515 517 aa9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 SLC16A4O15374 487 aa9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 NR2F2P24468 414 aa9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 DSG3P32926 999 aa9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 CCDC144BQ3MJ40 725 aa9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 RNF169Q8NCN4 708 aa9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 AK8Q96MA6 479 aa9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 NAP1L4Q99733 375 aaKnown RBP9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 PORCNQ9H237 461 aa9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 SLC38A10Q9HBR0 1119 aa9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 ADD3Q9UEY8 706 aaKnown RBP9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 PYCARDQ9ULZ3 195 aa9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 PAXBP1Q9Y5B6 917 aa9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 TMCO5BA8MYB1 307 aa9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 EIF3JO75822 258 aaKnown RBP9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 TXNP10599 105 aaKnown RBP9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 ITGB5P18084 799 aa9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 NOP2P46087 812 aaKnown RBP9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 USP11P51784 963 aa9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 TAF3Q5VWG9 929 aa9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 USP50Q70EL3 339 aaPredicted RBP9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 CCDC155Q8N6L0 562 aa9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 RAD54LQ92698 747 aa9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 R3HDMLQ9H3Y0 253 aa9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 JADE2Q9NQC1 790 aa9.96□□□□□ -0.81
CCDC144B-201ENST00000285176 KDM3AQ9Y4C1 1321 aa9.96□□□□□ -0.82
CCDC144B-201ENST00000285176 CCNA1P78396 465 aa9.96□□□□□ -0.82
CCDC144B-201ENST00000285176 PADI6Q6TGC4 694 aa9.96□□□□□ -0.82
CCDC144B-201ENST00000285176 LRRC71Q8N4P6 559 aa9.96□□□□□ -0.82
CCDC144B-201ENST00000285176 TNFRSF25Q93038 417 aa9.96□□□□□ -0.82
CCDC144B-201ENST00000285176 CNOT6LQ96LI5 555 aaKnown RBP9.96□□□□□ -0.82
CCDC144B-201ENST00000285176 REEP2Q9BRK0 252 aa9.96□□□□□ -0.82
CCDC144B-201ENST00000285176 PDCD2LQ9BRP1 358 aa9.96□□□□□ -0.82
CCDC144B-201ENST00000285176 APOL6Q9BWW8 343 aa9.96□□□□□ -0.82
CCDC144B-201ENST00000285176 MOV10L1Q9BXT6 1211 aaKnown RBP9.96□□□□□ -0.82
CCDC144B-201ENST00000285176 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.96□□□□□ -0.82
CCDC144B-201ENST00000285176 GOLGA6L9A6NEM1 432 aa9.96□□□□□ -0.82
CCDC144B-201ENST00000285176 INO80B-WBP1J3KQ70 363 aa9.96□□□□□ -0.82
CCDC144B-201ENST00000285176 ERLIN2O94905 339 aa9.96□□□□□ -0.82
CCDC144B-201ENST00000285176 KRT9P35527 623 aa9.96□□□□□ -0.82
CCDC144B-201ENST00000285176 PAFAH1B1P43034 410 aa9.96□□□□□ -0.82
CCDC144B-201ENST00000285176 FSTL1Q12841 308 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms