RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 PDIA5Q14554 519 aa20.25■□□□□ 0.83
PDLIM3-201ENST00000284767 KCNB1Q14721 858 aa20.25■□□□□ 0.83
PDLIM3-201ENST00000284767 FOXR1Q6PIV2 292 aa20.25■□□□□ 0.83
PDLIM3-201ENST00000284767 WDR59Q6PJI9 974 aa20.25■□□□□ 0.83
PDLIM3-201ENST00000284767 GIMAP8Q8ND71 665 aaPredicted RBP20.25■□□□□ 0.83
PDLIM3-201ENST00000284767 LARP4BQ92615 738 aaKnown RBP20.25■□□□□ 0.83
PDLIM3-201ENST00000284767 ZNF541Q9H0D2 1346 aa20.25■□□□□ 0.83
PDLIM3-201ENST00000284767 ANO9A1A5B4 782 aa20.25■□□□□ 0.83
PDLIM3-201ENST00000284767 PPFIA4O75335 1185 aa20.25■□□□□ 0.83
PDLIM3-201ENST00000284767 CYLC1P35663 651 aaPredicted RBP20.25■□□□□ 0.83
PDLIM3-201ENST00000284767 UBXN2AP68543 259 aa20.25■□□□□ 0.83
PDLIM3-201ENST00000284767 C7orf25Q9BPX7 421 aa20.25■□□□□ 0.83
PDLIM3-201ENST00000284767 HACL1Q9UJ83 578 aa20.25■□□□□ 0.83
PDLIM3-201ENST00000284767 MYL1P05976 194 aa20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 GCFC2P16383 781 aaKnown RBP20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 DNM2P50570 870 aa20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 SV2BQ7L1I2 683 aa20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 KIAA1328Q86T90 577 aa20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 NOC3LQ8WTT2 800 aaKnown RBP20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 RAB34Q9BZG1 259 aa20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 GLT8D2Q9H1C3 349 aa20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 KCNMB3Q9NPA1 279 aa20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 ZC3H4Q9UPT8 1303 aaKnown RBP20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 USP11P51784 963 aa20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 AP3B2Q13367 1082 aa20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 STIM1Q13586 685 aa20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 IQCEQ6IPM2 695 aa20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 RETREG2Q8NC44 543 aa20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 JAKMIP2Q96AA8 810 aa20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 LENG9Q96B70 501 aa20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 NUP58Q9BVL2 599 aa20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 SLC39A2Q9NP94 309 aa20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 CD2APQ9Y5K6 639 aa20.24■□□□□ 0.83
PDLIM3-201ENST00000284767 ASNSP08243 561 aa20.23■□□□□ 0.83
PDLIM3-201ENST00000284767 INPP5BP32019 993 aa20.23■□□□□ 0.83
PDLIM3-201ENST00000284767 MAP3K10Q02779 954 aa20.23■□□□□ 0.83
PDLIM3-201ENST00000284767 CCDC170Q8IYT3 715 aa20.23■□□□□ 0.83
PDLIM3-201ENST00000284767 RAD54LQ92698 747 aa20.23■□□□□ 0.83
PDLIM3-201ENST00000284767 EXOC1Q9NV70 894 aa20.23■□□□□ 0.83
PDLIM3-201ENST00000284767 MAGEC2Q9UBF1 373 aaPredicted RBP20.23■□□□□ 0.83
PDLIM3-201ENST00000284767 EIF3CLB5ME19 914 aaKnown RBP20.23■□□□□ 0.83
PDLIM3-201ENST00000284767 NBPF12Q5TAG4 269 aaPredicted RBP20.23■□□□□ 0.83
PDLIM3-201ENST00000284767 ZBTB9Q96C00 473 aa20.23■□□□□ 0.83
PDLIM3-201ENST00000284767 EIF3CQ99613 913 aaKnown RBP20.23■□□□□ 0.83
PDLIM3-201ENST00000284767 MAGEF1Q9HAY2 307 aa20.23■□□□□ 0.83
PDLIM3-201ENST00000284767 POTEB3A0JP26 581 aa20.22■□□□□ 0.83
PDLIM3-201ENST00000284767 POTECB2RU33 542 aa20.22■□□□□ 0.83
PDLIM3-201ENST00000284767 E9PMD0 336 aa20.22■□□□□ 0.83
PDLIM3-201ENST00000284767 FZD9O00144 591 aa20.22■□□□□ 0.83
PDLIM3-201ENST00000284767 IPO7O95373 1038 aaKnown RBP20.22■□□□□ 0.83
PDLIM3-201ENST00000284767 MMP14P50281 582 aa20.22■□□□□ 0.83
PDLIM3-201ENST00000284767 CORO7P57737 925 aa20.22■□□□□ 0.83
PDLIM3-201ENST00000284767 TMEM119Q4V9L6 283 aa20.22■□□□□ 0.83
PDLIM3-201ENST00000284767 POTEBQ6S5H4 581 aa20.22■□□□□ 0.83
PDLIM3-201ENST00000284767 KIAA0895Q8NCT3 520 aa20.22■□□□□ 0.83
PDLIM3-201ENST00000284767 ZNHIT6Q9NWK9 470 aaKnown RBP20.22■□□□□ 0.83
PDLIM3-201ENST00000284767 SYNPO2Q9UMS6 1093 aa20.22■□□□□ 0.83
PDLIM3-201ENST00000284767 PSMA7O14818 248 aa20.22■□□□□ 0.83
PDLIM3-201ENST00000284767 ETNPPLQ8TBG4 499 aa20.22■□□□□ 0.83
PDLIM3-201ENST00000284767 IPO4Q8TEX9 1081 aaKnown RBP20.22■□□□□ 0.83
PDLIM3-201ENST00000284767 CRACR2AQ9BSW2 395 aa20.22■□□□□ 0.83
PDLIM3-201ENST00000284767 TTYH3Q9C0H2 523 aa20.22■□□□□ 0.83
PDLIM3-201ENST00000284767 DEFB129Q9H1M3 183 aa20.22■□□□□ 0.83
PDLIM3-201ENST00000284767 RNF216Q9NWF9 866 aaPredicted RBP20.22■□□□□ 0.83
PDLIM3-201ENST00000284767 CYP3A7-CYP3A51PA0A087WV96 503 aa20.21■□□□□ 0.83
PDLIM3-201ENST00000284767 SRGAP2O75044 1071 aa20.21■□□□□ 0.83
PDLIM3-201ENST00000284767 SSBP05455 408 aaKnown RBP eCLIP20.21■□□□□ 0.83
PDLIM3-201ENST00000284767 IDEP14735 1019 aa20.21■□□□□ 0.83
PDLIM3-201ENST00000284767 CYP3A7P24462 503 aa20.21■□□□□ 0.83
PDLIM3-201ENST00000284767 SREBF1P36956 1147 aa20.21■□□□□ 0.83
PDLIM3-201ENST00000284767 GLIS3Q8NEA6 775 aa20.21■□□□□ 0.83
PDLIM3-201ENST00000284767 MBOAT7Q96N66 472 aa20.21■□□□□ 0.83
PDLIM3-201ENST00000284767 RANBP17Q9H2T7 1088 aaKnown RBP20.21■□□□□ 0.83
PDLIM3-201ENST00000284767 STK17AQ9UEE5 414 aa20.21■□□□□ 0.83
PDLIM3-201ENST00000284767 KIAA1024Q9UPX6 916 aa20.21■□□□□ 0.83
PDLIM3-201ENST00000284767 NOP2P46087 812 aaKnown RBP20.21■□□□□ 0.83
PDLIM3-201ENST00000284767 CCNI2Q6ZMN8 369 aaPredicted RBP20.21■□□□□ 0.83
PDLIM3-201ENST00000284767 CAGE1Q8TC20 777 aa20.21■□□□□ 0.83
PDLIM3-201ENST00000284767 RUBCNQ92622 972 aa20.21■□□□□ 0.83
PDLIM3-201ENST00000284767 CAPZA3Q96KX2 299 aa20.21■□□□□ 0.83
PDLIM3-201ENST00000284767 TRIM47Q96LD4 638 aa20.21■□□□□ 0.83
PDLIM3-201ENST00000284767 AGBL1Q96MI9 1066 aa20.21■□□□□ 0.83
PDLIM3-201ENST00000284767 PURBQ96QR8 312 aaKnown RBP20.21■□□□□ 0.83
PDLIM3-201ENST00000284767 PES1O00541 588 aaKnown RBP20.2■□□□□ 0.82
PDLIM3-201ENST00000284767 MED24O75448 989 aa20.2■□□□□ 0.82
PDLIM3-201ENST00000284767 RPS12P25398 132 aaKnown RBP20.2■□□□□ 0.82
PDLIM3-201ENST00000284767 AMPD3Q01432 767 aa20.2■□□□□ 0.82
PDLIM3-201ENST00000284767 CACNB1Q02641 598 aaPredicted RBP20.2■□□□□ 0.82
PDLIM3-201ENST00000284767 CCDC70Q6NSX1 233 aa20.2■□□□□ 0.82
PDLIM3-201ENST00000284767 CHURC1Q8WUH1 139 aa20.2■□□□□ 0.82
PDLIM3-201ENST00000284767 DDX12PQ92771 950 aa20.2■□□□□ 0.82
PDLIM3-201ENST00000284767 NKRFO15226 690 aaKnown RBP eCLIP20.2■□□□□ 0.82
PDLIM3-201ENST00000284767 SHOX2O60902 331 aaPredicted RBP20.2■□□□□ 0.82
PDLIM3-201ENST00000284767 ZBED6P86452 979 aa20.2■□□□□ 0.82
PDLIM3-201ENST00000284767 CDK17Q00537 523 aa20.2■□□□□ 0.82
PDLIM3-201ENST00000284767 SPIRE1Q08AE8 756 aa20.2■□□□□ 0.82
PDLIM3-201ENST00000284767 PPM1EQ8WY54 764 aa20.2■□□□□ 0.82
PDLIM3-201ENST00000284767 SELENOOQ9BVL4 669 aa20.2■□□□□ 0.82
PDLIM3-201ENST00000284767 TSGA10Q9BZW7 698 aa20.2■□□□□ 0.82
PDLIM3-201ENST00000284767 ATAD5Q96QE3 1844 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms