RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 JPH2Q9BR39 696 aaPredicted RBP12.86□□□□□ -0.35
SHPRH-201ENST00000275233 IFT122Q9HBG6 1241 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 PARVGQ9HBI0 331 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 EPB41L5Q9HCM4 733 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 EMILIN3Q9NT22 766 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 SPTLC3Q9NUV7 552 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 ATP8A1Q9Y2Q0 1164 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 ERBB4Q15303 1308 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 SOWAHDA6NJG2 315 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 OR6B3Q8NGW1 331 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 MTRQ99707 1265 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 HAUS4Q9H6D7 363 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 SAMSN1Q9NSI8 373 aaKnown RBP12.86□□□□□ -0.35
SHPRH-201ENST00000275233 PYCARDQ9ULZ3 195 aa12.86□□□□□ -0.35
SHPRH-201ENST00000275233 NPHP4O75161 1426 aaPredicted RBP12.85□□□□□ -0.35
SHPRH-201ENST00000275233 KRT33BQ14525 404 aa12.85□□□□□ -0.35
SHPRH-201ENST00000275233 TDRD3Q9H7E2 651 aaKnown RBP12.85□□□□□ -0.35
SHPRH-201ENST00000275233 F5H423 210 aaPredicted RBP12.85□□□□□ -0.35
SHPRH-201ENST00000275233 MED7O43513 233 aa12.85□□□□□ -0.35
SHPRH-201ENST00000275233 COG7P83436 770 aa12.85□□□□□ -0.35
SHPRH-201ENST00000275233 BRD3Q15059 726 aa12.85□□□□□ -0.35
SHPRH-201ENST00000275233 A0A1B0GUA9 196 aa12.85□□□□□ -0.35
SHPRH-201ENST00000275233 SOX5P35711 763 aa12.85□□□□□ -0.35
SHPRH-201ENST00000275233 THNSL1Q8IYQ7 743 aa12.85□□□□□ -0.35
SHPRH-201ENST00000275233 DHX36Q9H2U1 1008 aaKnown RBP12.85□□□□□ -0.35
SHPRH-201ENST00000275233 TMEM206Q9H813 350 aa12.85□□□□□ -0.35
SHPRH-201ENST00000275233 GCC2Q8IWJ2 1684 aa12.85□□□□□ -0.35
SHPRH-201ENST00000275233 PEG3Q9GZU2 1588 aa12.85□□□□□ -0.35
SHPRH-201ENST00000275233 A6NNZ2 444 aa12.85□□□□□ -0.35
SHPRH-201ENST00000275233 CLTAP09496 248 aa12.85□□□□□ -0.35
SHPRH-201ENST00000275233 TUBB8Q3ZCM7 444 aa12.85□□□□□ -0.35
SHPRH-201ENST00000275233 PPP4R4Q6NUP7 873 aa12.85□□□□□ -0.35
SHPRH-201ENST00000275233 PRDM5Q9NQX1 630 aaPredicted RBP12.85□□□□□ -0.35
SHPRH-201ENST00000275233 GCNAQ96QF7 691 aa12.85□□□□□ -0.35
SHPRH-201ENST00000275233 PDE11AQ9HCR9 933 aa12.85□□□□□ -0.35
SHPRH-201ENST00000275233 PRPSAP2O60256 369 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 SMIM24O75264 130 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 CRKP46108 304 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 IRX4P78413 519 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 EXOC8Q8IYI6 725 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 SYNE4Q8N205 404 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 DHTKD1Q96HY7 919 aaPredicted RBP12.84□□□□□ -0.35
SHPRH-201ENST00000275233 AK8Q96MA6 479 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 BCAP29Q9UHQ4 241 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 PALLDQ8WX93 1383 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 TOM1L1O75674 476 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 MX2P20592 715 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 KIF23Q02241 960 aaPredicted RBP12.84□□□□□ -0.35
SHPRH-201ENST00000275233 PRPF38AQ8NAV1 312 aaKnown RBP12.84□□□□□ -0.35
SHPRH-201ENST00000275233 HVCN1Q96D96 273 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 NCAPGQ9BPX3 1015 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 HEG1Q9ULI3 1381 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 USP17L5A8MUK1 530 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 SLC27A3Q5K4L6 730 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 PASD1Q8IV76 773 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 BBOF1Q8ND07 529 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 SLC17A8Q8NDX2 589 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 AP1M1Q9BXS5 423 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 MRPL46Q9H2W6 279 aaKnown RBP12.84□□□□□ -0.35
SHPRH-201ENST00000275233 GDAQ9Y2T3 454 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 NLRP1Q9C000 1473 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 PNMA6FA0A0J9YX94 578 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 MAN2A1Q16706 1144 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 DEPDC1BQ8WUY9 529 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 ZHX2Q9Y6X8 837 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 ABCB11O95342 1321 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 ZNF335Q9H4Z2 1342 aaPredicted RBP12.84□□□□□ -0.35
SHPRH-201ENST00000275233 LARGE1O95461 756 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 SLC7A5Q01650 507 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 C10orf76Q5T2E6 689 aa12.84□□□□□ -0.35
SHPRH-201ENST00000275233 K7ERI5 159 aa12.83□□□□□ -0.35
SHPRH-201ENST00000275233 SART1O43290 800 aaKnown RBP12.83□□□□□ -0.35
SHPRH-201ENST00000275233 PTPN12Q05209 780 aaKnown RBP12.83□□□□□ -0.35
SHPRH-201ENST00000275233 MASTLQ96GX5 879 aa12.83□□□□□ -0.35
SHPRH-201ENST00000275233 GSDMAQ96QA5 445 aa12.83□□□□□ -0.35
SHPRH-201ENST00000275233 CUEDC2Q9H467 287 aa12.83□□□□□ -0.35
SHPRH-201ENST00000275233 MAGEF1Q9HAY2 307 aa12.83□□□□□ -0.35
SHPRH-201ENST00000275233 UGGT1Q9NYU2 1555 aa12.83□□□□□ -0.35
SHPRH-201ENST00000275233 LRRD1A4D1F6 860 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 NMT2O60551 498 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 MSH2P43246 934 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 MRPS25P82663 173 aaKnown RBP12.83□□□□□ -0.36
SHPRH-201ENST00000275233 TCP11X2Q5H9J9 407 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 GJB4Q9NTQ9 266 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 HACD3Q9P035 362 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 DISP1Q96F81 1524 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 CD2BP2O95400 341 aaKnown RBP12.83□□□□□ -0.36
SHPRH-201ENST00000275233 PPP2R5EQ16537 467 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 HABP4Q5JVS0 413 aaKnown RBP12.83□□□□□ -0.36
SHPRH-201ENST00000275233 CATSPER4Q7RTX7 472 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 BCAS4Q8TDM0 211 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 CDHR1Q96JP9 859 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 RTKN2Q8IZC4 609 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 SDCCAG3Q96C92 435 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 WRNIP1Q96S55 665 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 NHEJ1Q9H9Q4 299 aaPredicted RBP12.83□□□□□ -0.36
SHPRH-201ENST00000275233 DAAM1Q9Y4D1 1078 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 EFCAB6Q5THR3 1501 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 ATP8B3O60423 1300 aa12.83□□□□□ -0.36
SHPRH-201ENST00000275233 MYO5CQ9NQX4 1742 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms