RNA–Protein interactions for RNA: ENST00000274990.4

CRIP3-201, Transcript of cysteine rich protein 3, humanhuman

TSL 1 (best) BASIC

Gene CRIP3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIP3-201ENST00000274990 ZNF365Q70YC5 407 aa10.66□□□□□ -0.7
CRIP3-201ENST00000274990 OTOP2Q7RTS6 562 aa10.66□□□□□ -0.7
CRIP3-201ENST00000274990 CCDC148Q8NFR7 591 aa10.66□□□□□ -0.7
CRIP3-201ENST00000274990 CCDC12Q8WUD4 166 aaPredicted RBP10.66□□□□□ -0.7
CRIP3-201ENST00000274990 TRAPPC12Q8WVT3 735 aa10.66□□□□□ -0.7
CRIP3-201ENST00000274990 FAM161BQ96MY7 647 aa10.66□□□□□ -0.7
CRIP3-201ENST00000274990 PHF20Q9BVI0 1012 aa10.66□□□□□ -0.7
CRIP3-201ENST00000274990 TUT1Q9H6E5 874 aaKnown RBP10.66□□□□□ -0.7
CRIP3-201ENST00000274990 JPH1Q9HDC5 661 aaPredicted RBP10.66□□□□□ -0.7
CRIP3-201ENST00000274990 CXXC1Q9P0U4 656 aaPredicted RBP10.66□□□□□ -0.7
CRIP3-201ENST00000274990 NOD1Q9Y239 953 aa10.66□□□□□ -0.7
CRIP3-201ENST00000274990 KAT6AQ92794 2004 aa10.65□□□□□ -0.7
CRIP3-201ENST00000274990 WNT7AO00755 349 aa10.65□□□□□ -0.7
CRIP3-201ENST00000274990 DHX15O43143 795 aaKnown RBP10.65□□□□□ -0.7
CRIP3-201ENST00000274990 CHMP2AO43633 222 aa10.65□□□□□ -0.7
CRIP3-201ENST00000274990 CTSHP09668 335 aa10.65□□□□□ -0.7
CRIP3-201ENST00000274990 RBM25P49756 843 aaKnown RBP10.65□□□□□ -0.7
CRIP3-201ENST00000274990 ACTR2P61160 394 aa10.65□□□□□ -0.7
CRIP3-201ENST00000274990 TMEM240Q5SV17 173 aa10.65□□□□□ -0.7
CRIP3-201ENST00000274990 PIK3AP1Q6ZUJ8 805 aa10.65□□□□□ -0.7
CRIP3-201ENST00000274990 TMCO2Q7Z6W1 182 aaPredicted RBP10.65□□□□□ -0.7
CRIP3-201ENST00000274990 LENG9Q96B70 501 aa10.65□□□□□ -0.7
CRIP3-201ENST00000274990 RNPC3Q96LT9 517 aaKnown RBP10.65□□□□□ -0.7
CRIP3-201ENST00000274990 SENP7Q9BQF6 1050 aa10.65□□□□□ -0.7
CRIP3-201ENST00000274990 SH3GLB2Q9NR46 395 aa10.65□□□□□ -0.7
CRIP3-201ENST00000274990 SLC9A2Q9UBY0 812 aa10.65□□□□□ -0.7
CRIP3-201ENST00000274990 LIMCH1Q9UPQ0 1083 aa10.65□□□□□ -0.7
CRIP3-201ENST00000274990 WDR81Q562E7 1941 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 STK36Q9NRP7 1315 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 GBF1Q92538 1859 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 TANC1Q9C0D5 1861 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 MSH4O15457 936 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 SLC37A4O43826 429 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 CDKL5O76039 1030 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 CYP3A4P08684 503 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 IQCF3P0C7M6 154 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 PBX2P40425 430 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 GPNMBQ14956 572 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 RUFY4Q6ZNE9 571 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 TMEM199Q8N511 208 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 LMBR1Q8WVP7 490 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 SEPT1Q8WYJ6 367 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 GLG1Q92896 1179 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 ATP6V0A1Q93050 837 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 SDF4Q9BRK5 362 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 ZNF577Q9BSK1 485 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 GLT8D2Q9H1C3 349 aa10.64□□□□□ -0.71
CRIP3-201ENST00000274990 C17orf102A2RUQ5 167 aa10.63□□□□□ -0.71
CRIP3-201ENST00000274990 BTBD18B2RXH4 712 aa10.63□□□□□ -0.71
CRIP3-201ENST00000274990 IPO5O00410 1097 aaKnown RBP10.63□□□□□ -0.71
CRIP3-201ENST00000274990 CKBP12277 381 aa10.63□□□□□ -0.71
CRIP3-201ENST00000274990 ATP2B1P20020 1258 aa10.63□□□□□ -0.71
CRIP3-201ENST00000274990 THPOP40225 353 aa10.63□□□□□ -0.71
CRIP3-201ENST00000274990 RABGGTBP53611 331 aa10.63□□□□□ -0.71
CRIP3-201ENST00000274990 TMEM62Q0P6H9 643 aa10.63□□□□□ -0.71
CRIP3-201ENST00000274990 MBTPS1Q14703 1052 aa10.63□□□□□ -0.71
CRIP3-201ENST00000274990 TRIM71Q2Q1W2 868 aaKnown RBP10.63□□□□□ -0.71
CRIP3-201ENST00000274990 LETM2Q2VYF4 491 aa10.63□□□□□ -0.71
CRIP3-201ENST00000274990 ZNF618Q5T7W0 954 aa10.63□□□□□ -0.71
CRIP3-201ENST00000274990 KRT40Q6A162 431 aa10.63□□□□□ -0.71
CRIP3-201ENST00000274990 SESTD1Q86VW0 696 aa10.63□□□□□ -0.71
CRIP3-201ENST00000274990 CCDC60Q8IWA6 550 aaPredicted RBP10.63□□□□□ -0.71
CRIP3-201ENST00000274990 BICD2Q8TD16 824 aa10.63□□□□□ -0.71
CRIP3-201ENST00000274990 CDHR1Q96JP9 859 aa10.63□□□□□ -0.71
CRIP3-201ENST00000274990 KATNAL1Q9BW62 490 aa10.63□□□□□ -0.71
CRIP3-201ENST00000274990 IL23AQ9NPF7 189 aa10.63□□□□□ -0.71
CRIP3-201ENST00000274990 PTPRSQ13332 1948 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 CCDC194A0A1B0GVG4 234 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 TMEM150BA6NC51 233 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 ZBBXA8MT70 800 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 BACH1O14867 736 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 NBNO60934 754 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 SUPT20HL2P0C7V6 817 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 MYOGP15173 224 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 ATP4AP20648 1035 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 CIITAP33076 1130 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 PTPN11Q06124 597 aaPredicted RBP10.62□□□□□ -0.71
CRIP3-201ENST00000274990 PPFIA1Q13136 1202 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 PPIGQ13427 754 aaKnown RBP eCLIP10.62□□□□□ -0.712e-8■■■■■ 31.7
CRIP3-201ENST00000274990 PLCB4Q15147 1175 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 NONOQ15233 471 aaKnown RBP eCLIP10.62□□□□□ -0.71
CRIP3-201ENST00000274990 UGCGQ16739 394 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 SWSAP1Q6NVH7 229 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 TRAF7Q6Q0C0 670 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 RETREG2Q8NC44 543 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 DAGLBQ8NCG7 672 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 GIMAP8Q8ND71 665 aaPredicted RBP10.62□□□□□ -0.71
CRIP3-201ENST00000274990 TNFRSF25Q93038 417 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 TBC1D32Q96NH3 1257 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 PPP1R16BQ96T49 567 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 SH2D3AQ9BRG2 576 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 BACH2Q9BYV9 841 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 FTOQ9C0B1 505 aaKnown RBP eCLIP10.62□□□□□ -0.71
CRIP3-201ENST00000274990 FAM49AQ9H0Q0 323 aaPredicted RBP10.62□□□□□ -0.71
CRIP3-201ENST00000274990 UNC45AQ9H3U1 944 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 MYH9P35579 1960 aaKnown RBP10.62□□□□□ -0.71
CRIP3-201ENST00000274990 SIP14410 1827 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 LOXHD1Q8IVV2 1947 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 EVPLQ92817 2033 aa10.62□□□□□ -0.71
CRIP3-201ENST00000274990 NFASCO94856 1347 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms